RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 KDM7AQ6ZMT4 941 aa15.47■□□□□ 0.07
SCLT1-209ENST00000511426 DNAAF3Q8N9W5 541 aa15.47■□□□□ 0.07
SCLT1-209ENST00000511426 DCAF4L2Q8NA75 395 aa15.47■□□□□ 0.07
SCLT1-209ENST00000511426 EPS8L3Q8TE67 593 aaKnown RBP15.47■□□□□ 0.07
SCLT1-209ENST00000511426 WBP2Q969T9 261 aa15.47■□□□□ 0.07
SCLT1-209ENST00000511426 TTC17Q96AE7 1141 aa15.47■□□□□ 0.07
SCLT1-209ENST00000511426 ACDQ96AP0 544 aa15.47■□□□□ 0.07
SCLT1-209ENST00000511426 TADA1Q96BN2 335 aa15.47■□□□□ 0.07
SCLT1-209ENST00000511426 OXNAD1Q96HP4 312 aaPredicted RBP15.47■□□□□ 0.07
SCLT1-209ENST00000511426 MGME1Q9BQP7 344 aa15.47■□□□□ 0.07
SCLT1-209ENST00000511426 DHRS4Q9BTZ2 278 aa15.47■□□□□ 0.07
SCLT1-209ENST00000511426 CENPHQ9H3R5 247 aa15.47■□□□□ 0.07
SCLT1-209ENST00000511426 CNOT10Q9H9A5 744 aaKnown RBP15.47■□□□□ 0.07
SCLT1-209ENST00000511426 PIDD1Q9HB75 910 aa15.47■□□□□ 0.07
SCLT1-209ENST00000511426 ARNT2Q9HBZ2 717 aa15.47■□□□□ 0.07
SCLT1-209ENST00000511426 ATP13A1Q9HD20 1204 aa15.47■□□□□ 0.07
SCLT1-209ENST00000511426 PSMC3IPQ9P2W1 217 aaPredicted RBP15.47■□□□□ 0.07
SCLT1-209ENST00000511426 UBA2Q9UBT2 640 aaPredicted RBP15.47■□□□□ 0.07
SCLT1-209ENST00000511426 NYNRINQ9P2P1 1898 aaKnown RBP15.47■□□□□ 0.07
SCLT1-209ENST00000511426 TLDC2A0PJX2 215 aa15.46■□□□□ 0.07
SCLT1-209ENST00000511426 AVILO75366 819 aa15.46■□□□□ 0.07
SCLT1-209ENST00000511426 ALDH1A2O94788 518 aa15.46■□□□□ 0.07
SCLT1-209ENST00000511426 EPOP01588 193 aa15.46■□□□□ 0.07
SCLT1-209ENST00000511426 POLBP06746 335 aa15.46■□□□□ 0.07
SCLT1-209ENST00000511426 ACVRL1P37023 503 aa15.46■□□□□ 0.07
SCLT1-209ENST00000511426 GABPB1Q06547 395 aaPredicted RBP15.46■□□□□ 0.07
SCLT1-209ENST00000511426 SLC10A7Q0GE19 358 aa15.46■□□□□ 0.07
SCLT1-209ENST00000511426 LONRF1Q17RB8 773 aa15.46■□□□□ 0.07
SCLT1-209ENST00000511426 SPANXN3Q5MJ09 141 aa15.46■□□□□ 0.07
SCLT1-209ENST00000511426 POTEHQ6S545 545 aa15.46■□□□□ 0.07
SCLT1-209ENST00000511426 UHMK1Q8TAS1 419 aaKnown RBP15.46■□□□□ 0.07
SCLT1-209ENST00000511426 FBF1Q8TES7 1133 aa15.46■□□□□ 0.07
SCLT1-209ENST00000511426 USP33Q8TEY7 942 aa15.46■□□□□ 0.07
SCLT1-209ENST00000511426 ARNTL2Q8WYA1 636 aa15.46■□□□□ 0.07
SCLT1-209ENST00000511426 SMG7Q92540 1137 aaKnown RBP15.46■□□□□ 0.07
SCLT1-209ENST00000511426 ZNF419Q96HQ0 510 aaPredicted RBP15.46■□□□□ 0.07
SCLT1-209ENST00000511426 XPO6Q96QU8 1125 aaKnown RBP15.46■□□□□ 0.07
SCLT1-209ENST00000511426 TBL1YQ9BQ87 522 aa15.46■□□□□ 0.07
SCLT1-209ENST00000511426 FSD1LQ9BXM9 530 aa15.46■□□□□ 0.07
SCLT1-209ENST00000511426 MUC3BQ9H195 1237 aa15.46■□□□□ 0.07
SCLT1-209ENST00000511426 MRM3Q9HC36 420 aaKnown RBP15.46■□□□□ 0.07
SCLT1-209ENST00000511426 ZNF180Q9UJW8 692 aa15.46■□□□□ 0.07
SCLT1-209ENST00000511426 MRPS23Q9Y3D9 190 aaKnown RBP15.46■□□□□ 0.07
SCLT1-209ENST00000511426 MAD1L1Q9Y6D9 718 aa15.46■□□□□ 0.07
SCLT1-209ENST00000511426 CHD5Q8TDI0 1954 aa15.46■□□□□ 0.07
SCLT1-209ENST00000511426 HELZP42694 1942 aaKnown RBP15.45■□□□□ 0.06
SCLT1-209ENST00000511426 A0A0D9SEW6 157 aa15.45■□□□□ 0.06
SCLT1-209ENST00000511426 PER2O15055 1255 aa15.45■□□□□ 0.06
SCLT1-209ENST00000511426 POLR3GO15318 223 aaPredicted RBP15.45■□□□□ 0.06
SCLT1-209ENST00000511426 BANF1O75531 89 aa15.45■□□□□ 0.06
SCLT1-209ENST00000511426 USP1O94782 785 aa15.45■□□□□ 0.06
SCLT1-209ENST00000511426 CSPG5O95196 566 aa15.45■□□□□ 0.06
SCLT1-209ENST00000511426 ADRA1AP35348 466 aa15.45■□□□□ 0.06
SCLT1-209ENST00000511426 SGSHP51688 502 aa15.45■□□□□ 0.06
SCLT1-209ENST00000511426 CBX1P83916 185 aa15.45■□□□□ 0.06
SCLT1-209ENST00000511426 SKOR1P84550 965 aa15.45■□□□□ 0.06
SCLT1-209ENST00000511426 ZNF77Q15935 545 aa15.45■□□□□ 0.06
SCLT1-209ENST00000511426 SYCP2LQ5T4T6 812 aa15.45■□□□□ 0.06
SCLT1-209ENST00000511426 STXBP5Q5T5C0 1151 aa15.45■□□□□ 0.06
SCLT1-209ENST00000511426 UBAP2Q5T6F2 1119 aaKnown RBP15.45■□□□□ 0.06
SCLT1-209ENST00000511426 FYB2Q5VWT5 728 aa15.45■□□□□ 0.06
SCLT1-209ENST00000511426 GRASPQ7Z6J2 395 aaPredicted RBP15.45■□□□□ 0.06
SCLT1-209ENST00000511426 IGDCC3Q8IVU1 814 aa15.45■□□□□ 0.06
SCLT1-209ENST00000511426 MFN1Q8IWA4 741 aa15.45■□□□□ 0.06
SCLT1-209ENST00000511426 BBS7Q8IWZ6 715 aa15.45■□□□□ 0.06
SCLT1-209ENST00000511426 AGGF1Q8N302 714 aaeCLIP15.45■□□□□ 0.06
SCLT1-209ENST00000511426 FIBINQ8TAL6 211 aa15.45■□□□□ 0.06
SCLT1-209ENST00000511426 CDKL2Q92772 493 aa15.45■□□□□ 0.06
SCLT1-209ENST00000511426 USP13Q92995 863 aaPredicted RBP15.45■□□□□ 0.06
SCLT1-209ENST00000511426 TCEAL4Q96EI5 215 aa15.45■□□□□ 0.06
SCLT1-209ENST00000511426 C2orf49Q9BVC5 232 aaPredicted RBP15.45■□□□□ 0.06
SCLT1-209ENST00000511426 NT5MQ9NPB1 228 aa15.45■□□□□ 0.06
SCLT1-209ENST00000511426 KIAA1522Q9P206 1035 aaPredicted RBP15.45■□□□□ 0.06
SCLT1-209ENST00000511426 NOVA2Q9UNW9 492 aaKnown RBP15.45■□□□□ 0.06
SCLT1-209ENST00000511426 FAM237BA0A1B0GVD1 139 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 TSPAN3O60637 253 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 GJA1P17302 382 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 GRIA1P42261 906 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 NRIP1P48552 1158 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 PLK1P53350 603 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 SLC20A2Q08357 652 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 LAMB3Q13751 1172 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 SLC5A9Q2M3M2 681 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 HP1BP3Q5SSJ5 553 aaPredicted RBP15.44■□□□□ 0.06
SCLT1-209ENST00000511426 ADGRD1Q6QNK2 874 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 RANBP10Q6VN20 620 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 UNC5AQ6ZN44 842 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 OTOP3Q7RTS5 596 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 ADGRD2Q7Z7M1 963 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 TMEM135Q86UB9 458 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 LRRC6Q86X45 466 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 TDHQ8IZJ6 230 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 OR7D4Q8NG98 312 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 OR52K1Q8NGK4 314 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 DDI1Q8WTU0 396 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 CINPQ9BW66 212 aaPredicted RBP15.44■□□□□ 0.06
SCLT1-209ENST00000511426 PSD3Q9NYI0 1048 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 MOCS1Q9NZB8 636 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 BCCIPQ9P287 314 aaKnown RBP eCLIP15.44■□□□□ 0.06
SCLT1-209ENST00000511426 ADAM21Q9UKJ8 722 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms