RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 HOXD9P28356 352 aaPredicted RBP3.66□□□□□ -1.82
TRAPPC11-207ENST00000511409 SLC16A2P36021 539 aa3.66□□□□□ -1.82
TRAPPC11-207ENST00000511409 MMP13P45452 471 aa3.66□□□□□ -1.82
TRAPPC11-207ENST00000511409 HARS2P49590 506 aaKnown RBP3.66□□□□□ -1.82
TRAPPC11-207ENST00000511409 CCT4P50991 539 aaKnown RBP3.66□□□□□ -1.82
TRAPPC11-207ENST00000511409 TMPRSS3P57727 454 aa3.66□□□□□ -1.82
TRAPPC11-207ENST00000511409 EFNB1P98172 346 aa3.66□□□□□ -1.82
TRAPPC11-207ENST00000511409 CCDC142Q17RM4 750 aa3.66□□□□□ -1.82
TRAPPC11-207ENST00000511409 SMTNL2Q2TAL5 461 aa3.66□□□□□ -1.82
TRAPPC11-207ENST00000511409 Q4G0T1 1027 aa3.66□□□□□ -1.82
TRAPPC11-207ENST00000511409 MTX3Q5HYI7 312 aa3.66□□□□□ -1.82
TRAPPC11-207ENST00000511409 C6orf10Q5SRN2 563 aa3.66□□□□□ -1.82
TRAPPC11-207ENST00000511409 VWA5B1Q5TIE3 1220 aa3.66□□□□□ -1.82
TRAPPC11-207ENST00000511409 PAPD7Q5XG87 772 aaKnown RBP3.66□□□□□ -1.82
TRAPPC11-207ENST00000511409 ZNF626Q68DY1 528 aa3.66□□□□□ -1.82
TRAPPC11-207ENST00000511409 FAM180BQ6P0A1 224 aa3.66□□□□□ -1.82
TRAPPC11-207ENST00000511409 IL20RBQ6UXL0 311 aa3.66□□□□□ -1.82
TRAPPC11-207ENST00000511409 RRM2BQ7LG56 351 aa3.66□□□□□ -1.82
TRAPPC11-207ENST00000511409 R3HCC1LQ7Z5L2 792 aaKnown RBP3.66□□□□□ -1.82
TRAPPC11-207ENST00000511409 FAM185AQ8N0U4 392 aa3.66□□□□□ -1.82
TRAPPC11-207ENST00000511409 CPXM2Q8N436 756 aa3.66□□□□□ -1.82
TRAPPC11-207ENST00000511409 SLC44A5Q8NCS7 719 aa3.66□□□□□ -1.82
TRAPPC11-207ENST00000511409 CENPIQ92674 756 aaPredicted RBP3.66□□□□□ -1.82
TRAPPC11-207ENST00000511409 THSD1Q9NS62 852 aa3.66□□□□□ -1.82
TRAPPC11-207ENST00000511409 BABAM1Q9NWV8 329 aa3.66□□□□□ -1.82
TRAPPC11-207ENST00000511409 PPP1R14DQ9NXH3 145 aa3.66□□□□□ -1.82
TRAPPC11-207ENST00000511409 HCN3Q9P1Z3 774 aa3.66□□□□□ -1.82
TRAPPC11-207ENST00000511409 AASSQ9UDR5 926 aa3.66□□□□□ -1.82
TRAPPC11-207ENST00000511409 PLEKHB1Q9UF11 243 aaPredicted RBP3.66□□□□□ -1.82
TRAPPC11-207ENST00000511409 RAP2CQ9Y3L5 183 aa3.66□□□□□ -1.82
TRAPPC11-207ENST00000511409 TRBV5-3A0A0A0MS03 114 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 GOLGA6L10A0A0M3HER8 536 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 C17orf113A0A1B0GUU1 675 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 A0A1W2PPC1 479 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 A0A1W2PPH5 198 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 GAGE10A6NGK3 116 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 DDTLA6NHG4 134 aaPredicted RBP3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 B4E171 279 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 E5RJQ4 531 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 SLC25A17O43808 307 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 TLR2O60603 784 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 SERPINC1P01008 464 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 YWHAQP27348 245 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 RFC1P35251 1148 aaPredicted RBP3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 TSPAN7P41732 249 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 DPP6P42658 865 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 ABCG1P45844 678 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 CCR9P51686 369 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 CLCNKBP51801 687 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 ARSFP54793 590 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 C21orf58P58505 322 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 UFM1P61960 85 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 NEXNQ0ZGT2 675 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 TRIP6Q15654 476 aaKnown RBP3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 SYTL3Q4VX76 610 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 ZNF667Q5HYK9 610 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 COLEC12Q5KU26 742 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 SHC4Q6S5L8 630 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 ATF7IPQ6VMQ6 1270 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 DSTYKQ6XUX3 929 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 MOB3CQ70IA8 216 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 SLC25A41Q8N5S1 370 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 LRRC57Q8N9N7 239 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 RASSF8Q8NHQ8 419 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 GDPD5Q8WTR4 605 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 RFFLQ8WZ73 363 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 ATOH1Q92858 354 aaPredicted RBP3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 SEMA4BQ9NPR2 832 aaPredicted RBP3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 ATP8A2Q9NTI2 1148 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 OLA1Q9NTK5 396 aaKnown RBP3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 TRNAU1APQ9NX07 287 aaKnown RBP3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 ZDHHC7Q9NXF8 308 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 GRHL1Q9NZI5 618 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 SLC25A10Q9UBX3 287 aaPredicted RBP3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 FBXO40Q9UH90 709 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 AGO2Q9UKV8 859 aaKnown RBP3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 COG5Q9UP83 839 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 PCDHGB5Q9Y5G0 923 aa3.65□□□□□ -1.83
TRAPPC11-207ENST00000511409 ARHGAP10A1A4S6 786 aa3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 PABPN1LA6NDY0 278 aaKnown RBP3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 CGB1A6NKQ9 187 aa3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 KIF1CO43896 1103 aaKnown RBP3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 ZC3H11AO75152 810 aaKnown RBP eCLIP3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 F9P00740 461 aa3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 CHRNB1P11230 501 aa3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 COX7A2P14406 83 aa3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 POU1F1P28069 291 aa3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 FMO4P31512 558 aa3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 MAN1A1P33908 653 aa3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 CTCFP49711 727 aaPredicted RBP3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 RUNX2Q13950 521 aa3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 KRT32Q14532 448 aa3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 VEPH1Q14D04 833 aa3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 MAPRE1Q15691 268 aaKnown RBP3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 TSTQ16762 297 aaKnown RBP3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 ME3Q16798 604 aa3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 WDR78Q5VTH9 848 aa3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 CCDC30Q5VVM6 783 aa3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 TMEM81Q6P7N7 255 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms