RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 FNIP2Q9P278 1114 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 BARX2Q9UMQ3 279 aaPredicted RBP13.11□□□□□ -0.31
HMGB2-205ENST00000511316 TBC1D30Q9Y2I9 924 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 CDY1Q9Y6F8 540 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 NUMBLQ9Y6R0 609 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 SF3B1O75533 1304 aaKnown RBP eCLIP13.11□□□□□ -0.312e-6■■■■□ 22.5
HMGB2-205ENST00000511316 GRXCR2A6NFK2 248 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 C2CD4BA6NLJ0 364 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 CILPO75339 1184 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 PAPLNO95428 1278 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 UQCRBP14927 111 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 EPCAMP16422 314 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 RPL17P18621 184 aaKnown RBP13.11□□□□□ -0.31
HMGB2-205ENST00000511316 AMPD1P23109 780 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 GLUD2P49448 558 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 RPS6KA3P51812 740 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 POLE2P56282 527 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 LILRA4P59901 499 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 TFAMQ00059 246 aaKnown RBP13.11□□□□□ -0.31
HMGB2-205ENST00000511316 GAD2Q05329 585 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 ADRM1Q16186 407 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 SLC5A9Q2M3M2 681 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 KCNT1Q5JUK3 1230 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 RNF220Q5VTB9 566 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 C9orf57Q5W0N0 161 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 ZFP1Q6P2D0 407 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 TTC7BQ86TV6 843 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 PDSS2Q86YH6 399 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 IGDCC3Q8IVU1 814 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 PLD5Q8N7P1 536 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 SMRP1Q8NCR6 262 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 ACSF2Q96CM8 615 aaPredicted RBP13.11□□□□□ -0.31
HMGB2-205ENST00000511316 CPXM1Q96SM3 734 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 TTPALQ9BTX7 342 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 ARMCX1Q9P291 453 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 SAE1Q9UBE0 346 aaPredicted RBP13.11□□□□□ -0.31
HMGB2-205ENST00000511316 SIX4Q9UIU6 781 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 PRPF19Q9UMS4 504 aaKnown RBP13.11□□□□□ -0.31
HMGB2-205ENST00000511316 SCN1AP35498 2009 aa13.1□□□□□ -0.31
HMGB2-205ENST00000511316 M0QZQ0 153 aa13.1□□□□□ -0.31
HMGB2-205ENST00000511316 TKTP29401 623 aaKnown RBP13.1□□□□□ -0.31
HMGB2-205ENST00000511316 GSTT1P30711 240 aa13.1□□□□□ -0.31
HMGB2-205ENST00000511316 TUBP50607 506 aa13.1□□□□□ -0.31
HMGB2-205ENST00000511316 KDSRQ06136 332 aa13.1□□□□□ -0.31
HMGB2-205ENST00000511316 BIRC2Q13490 618 aa13.1□□□□□ -0.31
HMGB2-205ENST00000511316 SEMA5AQ13591 1074 aa13.1□□□□□ -0.31
HMGB2-205ENST00000511316 FRG1Q14331 258 aaKnown RBP13.1□□□□□ -0.31
HMGB2-205ENST00000511316 CCDC14Q49A88 953 aa13.1□□□□□ -0.31
HMGB2-205ENST00000511316 UNC5AQ6ZN44 842 aa13.1□□□□□ -0.31
HMGB2-205ENST00000511316 LCA5Q86VQ0 697 aa13.1□□□□□ -0.31
HMGB2-205ENST00000511316 TREML1Q86YW5 311 aa13.1□□□□□ -0.31
HMGB2-205ENST00000511316 C1orf127Q8N9H9 656 aa13.1□□□□□ -0.31
HMGB2-205ENST00000511316 GFM2Q969S9 779 aaKnown RBP13.1□□□□□ -0.31
HMGB2-205ENST00000511316 ZFRQ96KR1 1074 aaKnown RBP13.1□□□□□ -0.31
HMGB2-205ENST00000511316 SUSD3Q96L08 255 aa13.1□□□□□ -0.31
HMGB2-205ENST00000511316 RCOR3Q9P2K3 495 aaPredicted RBP13.1□□□□□ -0.31
HMGB2-205ENST00000511316 PCSK1NQ9UHG2 260 aa13.1□□□□□ -0.31
HMGB2-205ENST00000511316 CDH22Q9UJ99 828 aa13.1□□□□□ -0.31
HMGB2-205ENST00000511316 MAD1L1Q9Y6D9 718 aa13.1□□□□□ -0.31
HMGB2-205ENST00000511316 CUL9Q8IWT3 2517 aa13.1□□□□□ -0.31
HMGB2-205ENST00000511316 EME2A4GXA9 379 aaPredicted RBP13.09□□□□□ -0.31
HMGB2-205ENST00000511316 ARHGAP42A6NI28 874 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 TMEM114B3SHH9 223 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 BAG2O95816 211 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 PENKP01210 267 aaPredicted RBP13.09□□□□□ -0.31
HMGB2-205ENST00000511316 APOA4P06727 396 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 APRTP07741 180 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 PDGFRAP16234 1089 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 L1CAMP32004 1257 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 SSTR3P32745 418 aaPredicted RBP13.09□□□□□ -0.31
HMGB2-205ENST00000511316 CPOXP36551 454 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 TMEM132DQ14C87 1099 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 ZNF394Q53GI3 561 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 FAXCQ5TGI0 409 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 ANKRD54Q6NXT1 300 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 PGM2L1Q6PCE3 622 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 LCLAT1Q6UWP7 414 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 CAND1Q86VP6 1230 aaKnown RBP13.09□□□□□ -0.31
HMGB2-205ENST00000511316 PSTKQ8IV42 348 aaKnown RBP13.09□□□□□ -0.31
HMGB2-205ENST00000511316 ICA1LQ8NDH6 482 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 SUSD6Q92537 303 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 MOCS1Q9NZB8 636 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 TMCO1Q9UM00 188 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 ARHGAP26Q9UNA1 814 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.09□□□□□ -0.31
HMGB2-205ENST00000511316 A0A088AWK7 358 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 M0QYV0 167 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 MBTPS2O43462 519 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 BUD23O43709 281 aaKnown RBP13.09□□□□□ -0.31
HMGB2-205ENST00000511316 ATP9BO43861 1147 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 MICAL2O94851 1124 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 IL9P15248 144 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 HADHAP40939 763 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 GPD2P43304 727 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 SLC1A6P48664 564 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 ALDH18A1P54886 795 aaKnown RBP13.09□□□□□ -0.31
HMGB2-205ENST00000511316 INCA1Q0VD86 236 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 FASTKD1Q53R41 847 aaKnown RBP13.09□□□□□ -0.31
HMGB2-205ENST00000511316 TJAP1Q5JTD0 557 aa13.09□□□□□ -0.31
HMGB2-205ENST00000511316 RABGAP1LQ5R372 815 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms