RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 HTR7P34969 479 aa14.25□□□□□ -0.13
DDX41-212ENST00000511040 RECQLP46063 649 aaPredicted RBP14.25□□□□□ -0.13
DDX41-212ENST00000511040 TAS2R40P59535 323 aa14.25□□□□□ -0.13
DDX41-212ENST00000511040 IRX4P78413 519 aa14.25□□□□□ -0.13
DDX41-212ENST00000511040 SLC20A2Q08357 652 aa14.25□□□□□ -0.13
DDX41-212ENST00000511040 MESDQ14696 234 aa14.25□□□□□ -0.13
DDX41-212ENST00000511040 BOLA3Q53S33 107 aa14.25□□□□□ -0.13
DDX41-212ENST00000511040 TRIM61Q5EBN2 209 aa14.25□□□□□ -0.13
DDX41-212ENST00000511040 SYCP2LQ5T4T6 812 aa14.25□□□□□ -0.13
DDX41-212ENST00000511040 DPY19L3Q6ZPD9 716 aa14.25□□□□□ -0.13
DDX41-212ENST00000511040 USP30Q70CQ3 517 aa14.25□□□□□ -0.13
DDX41-212ENST00000511040 UMODL1-AS1Q8N2C9 162 aa14.25□□□□□ -0.13
DDX41-212ENST00000511040 RYBPQ8N488 228 aaPredicted RBP14.25□□□□□ -0.13
DDX41-212ENST00000511040 NPWQ8N729 165 aa14.25□□□□□ -0.13
DDX41-212ENST00000511040 CADM4Q8NFZ8 388 aa14.25□□□□□ -0.13
DDX41-212ENST00000511040 OR6K2Q8NGY2 324 aa14.25□□□□□ -0.13
DDX41-212ENST00000511040 SLC35G2Q8TBE7 412 aa14.25□□□□□ -0.13
DDX41-212ENST00000511040 FOXJ1Q92949 421 aa14.25□□□□□ -0.13
DDX41-212ENST00000511040 RMDN1Q96DB5 314 aa14.25□□□□□ -0.13
DDX41-212ENST00000511040 EIF3CQ99613 913 aaKnown RBP14.25□□□□□ -0.13
DDX41-212ENST00000511040 SLC39A8Q9C0K1 460 aa14.25□□□□□ -0.13
DDX41-212ENST00000511040 SGK2Q9HBY8 427 aa14.25□□□□□ -0.13
DDX41-212ENST00000511040 KLHL11Q9NVR0 708 aa14.25□□□□□ -0.13
DDX41-212ENST00000511040 SCML1Q9UN30 329 aa14.25□□□□□ -0.13
DDX41-212ENST00000511040 FARP1Q9Y4F1 1045 aaPredicted RBP14.25□□□□□ -0.13
DDX41-212ENST00000511040 CHD5Q8TDI0 1954 aa14.25□□□□□ -0.13
DDX41-212ENST00000511040 C1QTNF3-AMACRE9PGA6 284 aa14.24□□□□□ -0.13
DDX41-212ENST00000511040 KPNA3O00505 521 aaPredicted RBP14.24□□□□□ -0.13
DDX41-212ENST00000511040 ALOX15BO15296 676 aa14.24□□□□□ -0.13
DDX41-212ENST00000511040 GKP32189 559 aa14.24□□□□□ -0.13
DDX41-212ENST00000511040 DRD3P35462 400 aa14.24□□□□□ -0.13
DDX41-212ENST00000511040 YBEYP58557 167 aaPredicted RBP14.24□□□□□ -0.13
DDX41-212ENST00000511040 CNTN1Q12860 1018 aa14.24□□□□□ -0.13
DDX41-212ENST00000511040 MMRN1Q13201 1228 aa14.24□□□□□ -0.13
DDX41-212ENST00000511040 SERINC3Q13530 473 aa14.24□□□□□ -0.13
DDX41-212ENST00000511040 DPYSQ14117 519 aa14.24□□□□□ -0.13
DDX41-212ENST00000511040 KRT81Q14533 505 aa14.24□□□□□ -0.13
DDX41-212ENST00000511040 DPYSL2Q16555 572 aa14.24□□□□□ -0.13
DDX41-212ENST00000511040 PARP15Q460N3 678 aa14.24□□□□□ -0.13
DDX41-212ENST00000511040 ATP13A4Q4VNC1 1196 aa14.24□□□□□ -0.13
DDX41-212ENST00000511040 CARD16Q5EG05 197 aa14.24□□□□□ -0.13
DDX41-212ENST00000511040 ARSIQ5FYB1 569 aa14.24□□□□□ -0.13
DDX41-212ENST00000511040 WDR45BQ5MNZ6 344 aa14.24□□□□□ -0.13
DDX41-212ENST00000511040 ATXN7L2Q5T6C5 722 aaPredicted RBP14.24□□□□□ -0.13
DDX41-212ENST00000511040 FAM46CQ5VWP2 391 aa14.24□□□□□ -0.13
DDX41-212ENST00000511040 NCEH1Q6PIU2 408 aa14.24□□□□□ -0.13
DDX41-212ENST00000511040 TP53INP2Q8IXH6 220 aa14.24□□□□□ -0.13
DDX41-212ENST00000511040 ZCCHC9Q8N567 271 aaKnown RBP14.24□□□□□ -0.13
DDX41-212ENST00000511040 PCDH20Q8N6Y1 951 aaKnown RBP14.24□□□□□ -0.13
DDX41-212ENST00000511040 OR14C36Q8NHC7 312 aa14.24□□□□□ -0.13
DDX41-212ENST00000511040 CCDC114Q96M63 670 aa14.24□□□□□ -0.13
DDX41-212ENST00000511040 EDEM2Q9BV94 578 aa14.24□□□□□ -0.13
DDX41-212ENST00000511040 CEP44Q9C0F1 390 aa14.24□□□□□ -0.13
DDX41-212ENST00000511040 LRRC19Q9H756 370 aa14.24□□□□□ -0.13
DDX41-212ENST00000511040 PCDH18Q9HCL0 1135 aa14.24□□□□□ -0.13
DDX41-212ENST00000511040 EIF2B4Q9UI10 523 aaKnown RBP14.24□□□□□ -0.13
DDX41-212ENST00000511040 CDV3Q9UKY7 258 aaKnown RBP14.24□□□□□ -0.13
DDX41-212ENST00000511040 TFR2Q9UP52 801 aa14.24□□□□□ -0.13
DDX41-212ENST00000511040 SLCO1B1Q9Y6L6 691 aa14.24□□□□□ -0.13
DDX41-212ENST00000511040 LNP1A1A4G5 178 aa14.23□□□□□ -0.13
DDX41-212ENST00000511040 PRR5-ARHGAP8B1AHC4 643 aa14.23□□□□□ -0.13
DDX41-212ENST00000511040 J3KR12 359 aa14.23□□□□□ -0.13
DDX41-212ENST00000511040 DFFAO00273 331 aa14.23□□□□□ -0.13
DDX41-212ENST00000511040 LEFTY1O75610 366 aa14.23□□□□□ -0.13
DDX41-212ENST00000511040 TMCC1O94876 653 aa14.23□□□□□ -0.13
DDX41-212ENST00000511040 CD48P09326 243 aa14.23□□□□□ -0.13
DDX41-212ENST00000511040 ARL4AP40617 200 aa14.23□□□□□ -0.13
DDX41-212ENST00000511040 MAGEA1P43355 309 aa14.23□□□□□ -0.13
DDX41-212ENST00000511040 MAPK8P45983 427 aa14.23□□□□□ -0.13
DDX41-212ENST00000511040 HCAR3P49019 387 aa14.23□□□□□ -0.13
DDX41-212ENST00000511040 PAPOLAP51003 745 aaKnown RBP14.23□□□□□ -0.13
DDX41-212ENST00000511040 CCNHP51946 323 aaPredicted RBP14.23□□□□□ -0.13
DDX41-212ENST00000511040 NDST2P52849 883 aa14.23□□□□□ -0.13
DDX41-212ENST00000511040 ADPRHP54922 357 aa14.23□□□□□ -0.13
DDX41-212ENST00000511040 CDH6P55285 790 aa14.23□□□□□ -0.13
DDX41-212ENST00000511040 GEMIN4P57678 1058 aaKnown RBP14.23□□□□□ -0.13
DDX41-212ENST00000511040 ARHGAP8P85298 464 aa14.23□□□□□ -0.13
DDX41-212ENST00000511040 SFSWAPQ12872 951 aaKnown RBP14.23□□□□□ -0.13
DDX41-212ENST00000511040 HADHQ16836 314 aaKnown RBP14.23□□□□□ -0.13
DDX41-212ENST00000511040 DUOXA1Q1HG43 343 aa14.23□□□□□ -0.13
DDX41-212ENST00000511040 PEAR1Q5VY43 1037 aaPredicted RBP14.23□□□□□ -0.13
DDX41-212ENST00000511040 KIAA0895LQ68EN5 471 aa14.23□□□□□ -0.13
DDX41-212ENST00000511040 ARHGAP36Q6ZRI8 547 aa14.23□□□□□ -0.13
DDX41-212ENST00000511040 POLNQ7Z5Q5 900 aa14.23□□□□□ -0.13
DDX41-212ENST00000511040 ARHGAP12Q8IWW6 846 aa14.23□□□□□ -0.13
DDX41-212ENST00000511040 SPC24Q8NBT2 197 aa14.23□□□□□ -0.13
DDX41-212ENST00000511040 TEKT4Q8WW24 435 aa14.23□□□□□ -0.13
DDX41-212ENST00000511040 DNASE2BQ8WZ79 361 aa14.23□□□□□ -0.13
DDX41-212ENST00000511040 ARRDC3Q96B67 414 aa14.23□□□□□ -0.13
DDX41-212ENST00000511040 BIRC7Q96CA5 298 aa14.23□□□□□ -0.13
DDX41-212ENST00000511040 CSPG4P5Q96PW8 444 aa14.23□□□□□ -0.13
DDX41-212ENST00000511040 ZDHHC6Q9H6R6 413 aa14.23□□□□□ -0.13
DDX41-212ENST00000511040 ETNK2Q9NVF9 386 aa14.23□□□□□ -0.13
DDX41-212ENST00000511040 HECAQ9UBI9 543 aaPredicted RBP14.23□□□□□ -0.13
DDX41-212ENST00000511040 IL36AQ9UHA7 158 aa14.23□□□□□ -0.13
DDX41-212ENST00000511040 FZD4Q9ULV1 537 aa14.23□□□□□ -0.13
DDX41-212ENST00000511040 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.23□□□□□ -0.13
DDX41-212ENST00000511040 CACNA1AO00555 2505 aa14.22□□□□□ -0.13
DDX41-212ENST00000511040 DMXL1Q9Y485 3027 aa14.22□□□□□ -0.13
DDX41-212ENST00000511040 ZSCAN5CA6NGD5 496 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms