RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 SLC35G2Q8TBE7 412 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 GRIN3AQ8TCU5 1115 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 GANCQ8TET4 914 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 LRRN4Q8WUT4 740 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 BIRC7Q96CA5 298 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 MRFAP1L1Q96HT8 127 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 NSMCE3Q96MG7 304 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 MAGEH1Q9H213 219 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 GOLPH3Q9H4A6 298 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 DEF6Q9H4E7 631 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 CAAP1Q9H8G2 361 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 PCDH18Q9HCL0 1135 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.84□□□□□ -0.19
SNF8-206ENST00000509989 TMEM51Q9NW97 253 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 IP6K2Q9UHH9 426 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 SPTBN2O15020 2390 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 TRPM6Q9BX84 2022 aa13.83□□□□□ -0.2
SNF8-206ENST00000509989 A0A0U1RQJ8 604 aa13.83□□□□□ -0.2
SNF8-206ENST00000509989 RCCD1A6NED2 376 aa13.83□□□□□ -0.2
SNF8-206ENST00000509989 SOWAHDA6NJG2 315 aa13.83□□□□□ -0.2
SNF8-206ENST00000509989 CDX4O14627 284 aaPredicted RBP13.83□□□□□ -0.2
SNF8-206ENST00000509989 INSIG1O15503 277 aa13.83□□□□□ -0.2
SNF8-206ENST00000509989 LRP3O75074 770 aa13.83□□□□□ -0.2
SNF8-206ENST00000509989 PROSCO94903 275 aa13.83□□□□□ -0.2
SNF8-206ENST00000509989 SEMA4FO95754 770 aa13.83□□□□□ -0.2
SNF8-206ENST00000509989 TMEM253P0C7T8 217 aa13.83□□□□□ -0.2
SNF8-206ENST00000509989 CHRNA3P32297 505 aa13.83□□□□□ -0.2
SNF8-206ENST00000509989 PAPOLAP51003 745 aaKnown RBP13.83□□□□□ -0.2
SNF8-206ENST00000509989 DNA2P51530 1060 aa13.83□□□□□ -0.2
SNF8-206ENST00000509989 AIF1P55008 147 aa13.83□□□□□ -0.2
SNF8-206ENST00000509989 TAS2R38P59533 333 aa13.83□□□□□ -0.2
SNF8-206ENST00000509989 SERINC3Q13530 473 aa13.83□□□□□ -0.2
SNF8-206ENST00000509989 PIGHQ14442 188 aaPredicted RBP13.83□□□□□ -0.2
SNF8-206ENST00000509989 ELAVL3Q14576 367 aaKnown RBP13.83□□□□□ -0.2
SNF8-206ENST00000509989 E2F5Q15329 346 aa13.83□□□□□ -0.2
SNF8-206ENST00000509989 CYTH1Q15438 398 aa13.83□□□□□ -0.2
SNF8-206ENST00000509989 DPYSL2Q16555 572 aa13.83□□□□□ -0.2
SNF8-206ENST00000509989 AASDHQ4L235 1098 aaPredicted RBP13.83□□□□□ -0.2
SNF8-206ENST00000509989 AFMIDQ63HM1 303 aa13.83□□□□□ -0.2
SNF8-206ENST00000509989 NCEH1Q6PIU2 408 aa13.83□□□□□ -0.2
SNF8-206ENST00000509989 POLNQ7Z5Q5 900 aa13.83□□□□□ -0.2
SNF8-206ENST00000509989 ZNF354CQ86Y25 554 aa13.83□□□□□ -0.2
SNF8-206ENST00000509989 CNGA4Q8IV77 575 aa13.83□□□□□ -0.2
SNF8-206ENST00000509989 RGL4Q8IZJ4 473 aa13.83□□□□□ -0.2
SNF8-206ENST00000509989 UMODL1-AS1Q8N2C9 162 aa13.83□□□□□ -0.2
SNF8-206ENST00000509989 ZCCHC9Q8N567 271 aaKnown RBP13.83□□□□□ -0.2
SNF8-206ENST00000509989 OR8D1Q8WZ84 308 aa13.83□□□□□ -0.2
SNF8-206ENST00000509989 TSC1Q92574 1164 aa13.83□□□□□ -0.2
SNF8-206ENST00000509989 EXOC2Q96KP1 924 aa13.83□□□□□ -0.2
SNF8-206ENST00000509989 CCDC42Q96M95 316 aa13.83□□□□□ -0.2
SNF8-206ENST00000509989 BTBD1Q9H0C5 482 aa13.83□□□□□ -0.2
SNF8-206ENST00000509989 MIR1-1HGQ9H1L0 117 aa13.83□□□□□ -0.2
SNF8-206ENST00000509989 FBRSQ9HAH7 460 aa13.83□□□□□ -0.2
SNF8-206ENST00000509989 PDFQ9HBH1 243 aa13.83□□□□□ -0.2
SNF8-206ENST00000509989 ZNHIT6Q9NWK9 470 aaKnown RBP13.83□□□□□ -0.2
SNF8-206ENST00000509989 REXO2Q9Y3B8 237 aaKnown RBP13.83□□□□□ -0.2
SNF8-206ENST00000509989 TTC24A2A3L6 582 aaPredicted RBP13.82□□□□□ -0.2
SNF8-206ENST00000509989 DCDC2BA2VCK2 349 aa13.82□□□□□ -0.2
SNF8-206ENST00000509989 MEI4A8MW99 385 aa13.82□□□□□ -0.2
SNF8-206ENST00000509989 MYO1FO00160 1098 aa13.82□□□□□ -0.2
SNF8-206ENST00000509989 BUB1O43683 1085 aa13.82□□□□□ -0.2
SNF8-206ENST00000509989 LEFTY1O75610 366 aa13.82□□□□□ -0.2
SNF8-206ENST00000509989 FSBPO95073 299 aa13.82□□□□□ -0.2
SNF8-206ENST00000509989 CFIP05156 583 aa13.82□□□□□ -0.2
SNF8-206ENST00000509989 TPM1P09493 284 aa13.82□□□□□ -0.2
SNF8-206ENST00000509989 C5AR1P21730 350 aa13.82□□□□□ -0.2
SNF8-206ENST00000509989 OXTRP30559 389 aa13.82□□□□□ -0.2
SNF8-206ENST00000509989 SSR1P43307 286 aaKnown RBP13.82□□□□□ -0.2
SNF8-206ENST00000509989 RGRP47804 291 aa13.82□□□□□ -0.2
SNF8-206ENST00000509989 CCNHP51946 323 aaPredicted RBP13.82□□□□□ -0.2
SNF8-206ENST00000509989 ADPRHP54922 357 aa13.82□□□□□ -0.2
SNF8-206ENST00000509989 ZBTB16Q05516 673 aa13.82□□□□□ -0.2
SNF8-206ENST00000509989 MESDQ14696 234 aa13.82□□□□□ -0.2
SNF8-206ENST00000509989 TTC31Q49AM3 519 aaPredicted RBP13.82□□□□□ -0.2
SNF8-206ENST00000509989 PIP5KL1Q5T9C9 394 aa13.82□□□□□ -0.2
SNF8-206ENST00000509989 AGBL4Q5VU57 503 aa13.82□□□□□ -0.2
SNF8-206ENST00000509989 RETSATQ6NUM9 610 aa13.82□□□□□ -0.2
SNF8-206ENST00000509989 RAD9BQ6WBX8 426 aa13.82□□□□□ -0.2
SNF8-206ENST00000509989 OR14C36Q8NHC7 312 aa13.82□□□□□ -0.2
SNF8-206ENST00000509989 CTNNBL1Q8WYA6 563 aaPredicted RBP13.82□□□□□ -0.2
SNF8-206ENST00000509989 DNASE2BQ8WZ79 361 aa13.82□□□□□ -0.2
SNF8-206ENST00000509989 SNX19Q92543 992 aa13.82□□□□□ -0.2
SNF8-206ENST00000509989 FAM131CQ96AQ9 280 aa13.82□□□□□ -0.2
SNF8-206ENST00000509989 CSPG4P5Q96PW8 444 aa13.82□□□□□ -0.2
SNF8-206ENST00000509989 PPP1R9BQ96SB3 815 aa13.82□□□□□ -0.2
SNF8-206ENST00000509989 OMDQ99983 421 aa13.82□□□□□ -0.2
SNF8-206ENST00000509989 CATSPERBQ9H7T0 1116 aa13.82□□□□□ -0.2
SNF8-206ENST00000509989 CAPN10Q9HC96 672 aa13.82□□□□□ -0.2
SNF8-206ENST00000509989 DLL3Q9NYJ7 618 aa13.82□□□□□ -0.2
SNF8-206ENST00000509989 LHX3Q9UBR4 397 aa13.82□□□□□ -0.2
SNF8-206ENST00000509989 SALL4Q9UJQ4 1053 aa13.82□□□□□ -0.2
SNF8-206ENST00000509989 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.82□□□□□ -0.2
SNF8-206ENST00000509989 CNOT1A5YKK6 2376 aaKnown RBP13.82□□□□□ -0.2
SNF8-206ENST00000509989 TDRD6O60522 2096 aaKnown RBP13.81□□□□□ -0.2
SNF8-206ENST00000509989 C4orf47A7E2U8 309 aa13.81□□□□□ -0.2
SNF8-206ENST00000509989 KPNA3O00505 521 aaPredicted RBP13.81□□□□□ -0.2
SNF8-206ENST00000509989 KHNYNO15037 678 aaKnown RBP13.81□□□□□ -0.2
SNF8-206ENST00000509989 MUSKO15146 869 aa13.81□□□□□ -0.2
SNF8-206ENST00000509989 FGF10O15520 208 aaPredicted RBP13.81□□□□□ -0.2
SNF8-206ENST00000509989 RNASEH1O60930 286 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms