RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-216ENST00000509784 FAM110DQ8TAY7 271 aaPredicted RBP3.41□□□□□ -1.86
CALCOCO2-216ENST00000509784 NCSTNQ92542 709 aa3.41□□□□□ -1.86
CALCOCO2-216ENST00000509784 IP6K1Q92551 441 aa3.41□□□□□ -1.86
CALCOCO2-216ENST00000509784 SH3KBP1Q96B97 665 aa3.41□□□□□ -1.86
CALCOCO2-216ENST00000509784 ELP4Q96EB1 424 aa3.41□□□□□ -1.86
CALCOCO2-216ENST00000509784 KIF1BPQ96EK5 621 aa3.41□□□□□ -1.86
CALCOCO2-216ENST00000509784 FCRL5Q96RD9 977 aa3.41□□□□□ -1.86
CALCOCO2-216ENST00000509784 EYA3Q99504 573 aa3.41□□□□□ -1.86
CALCOCO2-216ENST00000509784 EFHD1Q9BUP0 239 aa3.41□□□□□ -1.86
CALCOCO2-216ENST00000509784 GATA5Q9BWX5 397 aaPredicted RBP3.41□□□□□ -1.86
CALCOCO2-216ENST00000509784 TM2D2Q9BX73 214 aa3.41□□□□□ -1.86
CALCOCO2-216ENST00000509784 NPLQ9BXD5 320 aaPredicted RBP3.41□□□□□ -1.86
CALCOCO2-216ENST00000509784 PANK2Q9BZ23 570 aa3.41□□□□□ -1.86
CALCOCO2-216ENST00000509784 TTC12Q9H892 705 aaPredicted RBP3.41□□□□□ -1.86
CALCOCO2-216ENST00000509784 GRPEL1Q9HAV7 217 aa3.41□□□□□ -1.86
CALCOCO2-216ENST00000509784 VEZTQ9HBM0 779 aa3.41□□□□□ -1.86
CALCOCO2-216ENST00000509784 TERF2IPQ9NYB0 399 aa3.41□□□□□ -1.86
CALCOCO2-216ENST00000509784 CHMP5Q9NZZ3 219 aa3.41□□□□□ -1.86
CALCOCO2-216ENST00000509784 ORC3Q9UBD5 711 aaPredicted RBP3.41□□□□□ -1.86
CALCOCO2-216ENST00000509784 ING1Q9UK53 422 aaPredicted RBP3.41□□□□□ -1.86
CALCOCO2-216ENST00000509784 FBXO9Q9UK97 447 aaPredicted RBP3.41□□□□□ -1.86
CALCOCO2-216ENST00000509784 CAMK2AQ9UQM7 478 aa3.41□□□□□ -1.86
CALCOCO2-216ENST00000509784 DTX4Q9Y2E6 619 aa3.41□□□□□ -1.86
CALCOCO2-216ENST00000509784 KNSTRNQ9Y448 316 aa3.41□□□□□ -1.86
CALCOCO2-216ENST00000509784 INSL6Q9Y581 213 aa3.41□□□□□ -1.86
CALCOCO2-216ENST00000509784 KIF1BO60333 1816 aa3.41□□□□□ -1.86
CALCOCO2-216ENST00000509784 CDC42BPGQ6DT37 1551 aa3.41□□□□□ -1.86
CALCOCO2-216ENST00000509784 SPATA31A5Q5VU36 1347 aa3.41□□□□□ -1.86
CALCOCO2-216ENST00000509784 SPATA31A6Q5VVP1 1343 aa3.41□□□□□ -1.86
CALCOCO2-216ENST00000509784 EMSYQ7Z589 1322 aa3.41□□□□□ -1.86
CALCOCO2-216ENST00000509784 SPATA31A7Q8IWB4 1347 aa3.41□□□□□ -1.86
CALCOCO2-216ENST00000509784 MED14O60244 1454 aa3.41□□□□□ -1.86
CALCOCO2-216ENST00000509784 COL3A1P02461 1466 aaPredicted RBP3.41□□□□□ -1.86
CALCOCO2-216ENST00000509784 IBTKQ9P2D0 1353 aaPredicted RBP3.4□□□□□ -1.86
CALCOCO2-216ENST00000509784 TSPAN4O14817 238 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 RNF8O76064 485 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 F9P00740 461 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 FSHBP01225 129 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 COL11A2P13942 1736 aaPredicted RBP3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 PTMSP20962 102 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 TACR3P29371 465 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 CASP2P42575 452 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 GPD2P43304 727 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 SOX2P48431 317 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 CCR9P51686 369 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 INHBCP55103 352 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 YPEL5P62699 121 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 ZXDAP98168 799 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 ZBTB16Q05516 673 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 C10orf76Q5T2E6 689 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 GPATCH4Q5T3I0 446 aaKnown RBP3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 NAPEPLDQ6IQ20 393 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 ZNF474Q6S9Z5 364 aaPredicted RBP3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 RBM44Q6ZP01 1051 aaKnown RBP3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 C4orf50Q6ZRC1 276 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 H1FNTQ75WM6 255 aaPredicted RBP3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 RTL10Q7L3V2 364 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 MON1AQ86VX9 555 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 KLBQ86Z14 1044 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 AMER2Q8N7J2 671 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 ZNF366Q8N895 744 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 TDRD7Q8NHU6 1098 aaKnown RBP3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 KCNG4Q8TDN1 519 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 CNOT9Q92600 299 aaKnown RBP3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 C7orf26Q96N11 449 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 ASB2Q96Q27 587 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 CLSTN3Q9BQT9 956 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 LMAN2LQ9H0V9 348 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 SLC25A18Q9H1K4 315 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 TXNRD2Q9NNW7 524 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 MLXIPLQ9NP71 852 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 SEMA4GQ9NTN9 838 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 BLOC1S4Q9NUP1 217 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 TMEM248Q9NWD8 314 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 ARPP21Q9UBL0 812 aaPredicted RBP3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 HDAC6Q9UBN7 1215 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 SLC8A2Q9UPR5 921 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 NAALADL1Q9UQQ1 740 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 PPLO60437 1756 aa3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 ZCCHC11Q5TAX3 1644 aaKnown RBP3.4□□□□□ -1.87
CALCOCO2-216ENST00000509784 LMTK2Q8IWU2 1503 aa3.39□□□□□ -1.87
CALCOCO2-216ENST00000509784 ARHGEF28Q8N1W1 1705 aaKnown RBP3.39□□□□□ -1.87
CALCOCO2-216ENST00000509784 ADGRB1O14514 1584 aa3.39□□□□□ -1.87
CALCOCO2-216ENST00000509784 FRMPD1Q5SYB0 1578 aa3.39□□□□□ -1.87
CALCOCO2-216ENST00000509784 NSD3Q9BZ95 1437 aa3.39□□□□□ -1.87
CALCOCO2-216ENST00000509784 TRAPPC8Q9Y2L5 1435 aa3.39□□□□□ -1.87
CALCOCO2-216ENST00000509784 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.39□□□□□ -1.87
CALCOCO2-216ENST00000509784 CXorf65A6NEN9 183 aa3.39□□□□□ -1.87
CALCOCO2-216ENST00000509784 C17orf100A8MU93 164 aa3.39□□□□□ -1.87
CALCOCO2-216ENST00000509784 PER2O15055 1255 aa3.39□□□□□ -1.87
CALCOCO2-216ENST00000509784 INPPL1O15357 1258 aa3.39□□□□□ -1.87
CALCOCO2-216ENST00000509784 STRNO43815 780 aa3.39□□□□□ -1.87
CALCOCO2-216ENST00000509784 HBP1O60381 514 aa3.39□□□□□ -1.87
CALCOCO2-216ENST00000509784 SGPL1O95470 568 aa3.39□□□□□ -1.87
CALCOCO2-216ENST00000509784 CBX6O95503 412 aa3.39□□□□□ -1.87
CALCOCO2-216ENST00000509784 PLAUP00749 431 aa3.39□□□□□ -1.87
CALCOCO2-216ENST00000509784 URODP06132 367 aa3.39□□□□□ -1.87
CALCOCO2-216ENST00000509784 BDNFP23560 247 aa3.39□□□□□ -1.87
CALCOCO2-216ENST00000509784 GDF5P43026 501 aa3.39□□□□□ -1.87
CALCOCO2-216ENST00000509784 PTPN9P43378 593 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms