RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 ZNF843Q8N446 348 aa13.69□□□□□ -0.22
DDX41-210ENST00000509576 ZNF397Q8NF99 534 aaPredicted RBP13.69□□□□□ -0.22
DDX41-210ENST00000509576 GRIN3AQ8TCU5 1115 aa13.69□□□□□ -0.22
DDX41-210ENST00000509576 FGF11Q92914 225 aa13.69□□□□□ -0.22
DDX41-210ENST00000509576 KLHDC7BQ96G42 594 aa13.69□□□□□ -0.22
DDX41-210ENST00000509576 CCDC34Q96HJ3 373 aa13.69□□□□□ -0.22
DDX41-210ENST00000509576 APOLD1Q96LR9 279 aa13.69□□□□□ -0.22
DDX41-210ENST00000509576 TBCBQ99426 244 aa13.69□□□□□ -0.22
DDX41-210ENST00000509576 TRIM62Q9BVG3 475 aa13.69□□□□□ -0.22
DDX41-210ENST00000509576 TKTL2Q9H0I9 626 aa13.69□□□□□ -0.22
DDX41-210ENST00000509576 NDFIP2Q9NV92 336 aa13.69□□□□□ -0.22
DDX41-210ENST00000509576 KLHL11Q9NVR0 708 aa13.69□□□□□ -0.22
DDX41-210ENST00000509576 GGT7Q9UJ14 662 aa13.69□□□□□ -0.22
DDX41-210ENST00000509576 BICDL2A1A5D9 508 aa13.68□□□□□ -0.22
DDX41-210ENST00000509576 C1QTNF3-AMACRE9PGA6 284 aa13.68□□□□□ -0.22
DDX41-210ENST00000509576 KPNA3O00505 521 aaPredicted RBP13.68□□□□□ -0.22
DDX41-210ENST00000509576 OPA1O60313 960 aa13.68□□□□□ -0.22
DDX41-210ENST00000509576 CLDN11O75508 207 aa13.68□□□□□ -0.22
DDX41-210ENST00000509576 ENDOD1O94919 500 aa13.68□□□□□ -0.22
DDX41-210ENST00000509576 MPOP05164 745 aa13.68□□□□□ -0.22
DDX41-210ENST00000509576 CDK4P11802 303 aa13.68□□□□□ -0.22
DDX41-210ENST00000509576 GKP32189 559 aa13.68□□□□□ -0.22
DDX41-210ENST00000509576 NOS2P35228 1153 aa13.68□□□□□ -0.22
DDX41-210ENST00000509576 FLT3P36888 993 aa13.68□□□□□ -0.22
DDX41-210ENST00000509576 NNMTP40261 264 aa13.68□□□□□ -0.22
DDX41-210ENST00000509576 USP8P40818 1118 aa13.68□□□□□ -0.22
DDX41-210ENST00000509576 CETN1Q12798 172 aa13.68□□□□□ -0.22
DDX41-210ENST00000509576 OVGP1Q12889 678 aa13.68□□□□□ -0.22
DDX41-210ENST00000509576 FZD2Q14332 565 aa13.68□□□□□ -0.22
DDX41-210ENST00000509576 SLC45A4Q5BKX6 768 aa13.68□□□□□ -0.22
DDX41-210ENST00000509576 ARSIQ5FYB1 569 aa13.68□□□□□ -0.22
DDX41-210ENST00000509576 EFHC1Q5JVL4 640 aa13.68□□□□□ -0.22
DDX41-210ENST00000509576 FAM46CQ5VWP2 391 aa13.68□□□□□ -0.22
DDX41-210ENST00000509576 NYAP1Q6ZVC0 841 aa13.68□□□□□ -0.22
DDX41-210ENST00000509576 KLF6Q99612 283 aaPredicted RBP13.68□□□□□ -0.22
DDX41-210ENST00000509576 SEMA4CQ9C0C4 833 aa13.68□□□□□ -0.22
DDX41-210ENST00000509576 MUC3BQ9H195 1237 aa13.68□□□□□ -0.22
DDX41-210ENST00000509576 ASCL3Q9NQ33 180 aa13.68□□□□□ -0.22
DDX41-210ENST00000509576 TPX2Q9ULW0 747 aaKnown RBP13.68□□□□□ -0.22
DDX41-210ENST00000509576 NEU3Q9UQ49 428 aa13.68□□□□□ -0.22
DDX41-210ENST00000509576 BOD1L1Q8NFC6 3051 aa13.67□□□□□ -0.22
DDX41-210ENST00000509576 PIEZO2Q9H5I5 2752 aa13.67□□□□□ -0.22
DDX41-210ENST00000509576 GOLGA6L4A6NEF3 574 aa13.67□□□□□ -0.22
DDX41-210ENST00000509576 LEFTY1O75610 366 aa13.67□□□□□ -0.22
DDX41-210ENST00000509576 GNA14O95837 355 aa13.67□□□□□ -0.22
DDX41-210ENST00000509576 RHOCP08134 193 aa13.67□□□□□ -0.22
DDX41-210ENST00000509576 SLC2A3P11169 496 aa13.67□□□□□ -0.22
DDX41-210ENST00000509576 CKMT1AP12532 417 aa13.67□□□□□ -0.22
DDX41-210ENST00000509576 PLA2G2AP14555 144 aa13.67□□□□□ -0.22
DDX41-210ENST00000509576 PPP1R2P41236 205 aa13.67□□□□□ -0.22
DDX41-210ENST00000509576 ABL2P42684 1182 aa13.67□□□□□ -0.22
DDX41-210ENST00000509576 DRAP1Q14919 205 aaPredicted RBP13.67□□□□□ -0.22
DDX41-210ENST00000509576 ENOSF1Q7L5Y1 443 aa13.67□□□□□ -0.22
DDX41-210ENST00000509576 DSG4Q86SJ6 1040 aa13.67□□□□□ -0.22
DDX41-210ENST00000509576 DCAF4L2Q8NA75 395 aa13.67□□□□□ -0.22
DDX41-210ENST00000509576 ATP11CQ8NB49 1132 aa13.67□□□□□ -0.22
DDX41-210ENST00000509576 TMIEQ8NEW7 156 aa13.67□□□□□ -0.22
DDX41-210ENST00000509576 RNF34Q969K3 372 aa13.67□□□□□ -0.22
DDX41-210ENST00000509576 PGAP3Q96FM1 320 aaPredicted RBP13.67□□□□□ -0.22
DDX41-210ENST00000509576 PRR11Q96HE9 360 aaPredicted RBP13.67□□□□□ -0.22
DDX41-210ENST00000509576 NAF1Q96HR8 494 aaKnown RBP13.67□□□□□ -0.22
DDX41-210ENST00000509576 CALN1Q9BXU9 219 aa13.67□□□□□ -0.22
DDX41-210ENST00000509576 TCEAL2Q9H3H9 227 aaPredicted RBP13.67□□□□□ -0.22
DDX41-210ENST00000509576 CPNE5Q9HCH3 593 aa13.67□□□□□ -0.22
DDX41-210ENST00000509576 SLC12A6Q9UHW9 1150 aa13.67□□□□□ -0.22
DDX41-210ENST00000509576 ITM2BQ9Y287 266 aa13.67□□□□□ -0.22
DDX41-210ENST00000509576 MYO18BQ8IUG5 2567 aa13.67□□□□□ -0.22
DDX41-210ENST00000509576 K7ESM1 405 aa13.66□□□□□ -0.22
DDX41-210ENST00000509576 ZNF18P17022 549 aa13.66□□□□□ -0.22
DDX41-210ENST00000509576 TGM2P21980 687 aa13.66□□□□□ -0.22
DDX41-210ENST00000509576 HNRNPA2B1P22626 353 aaKnown RBP13.66□□□□□ -0.22
DDX41-210ENST00000509576 CDH5P33151 784 aaPredicted RBP13.66□□□□□ -0.22
DDX41-210ENST00000509576 NUDT1P36639 197 aa13.66□□□□□ -0.22
DDX41-210ENST00000509576 SULT1E1P49888 294 aa13.66□□□□□ -0.22
DDX41-210ENST00000509576 RNASE9P60153 205 aaKnown RBP13.66□□□□□ -0.22
DDX41-210ENST00000509576 MIIPQ5JXC2 388 aa13.66□□□□□ -0.22
DDX41-210ENST00000509576 Q6ZSR6 202 aa13.66□□□□□ -0.22
DDX41-210ENST00000509576 ERN2Q76MJ5 926 aaKnown RBP13.66□□□□□ -0.22
DDX41-210ENST00000509576 PARS2Q7L3T8 475 aaKnown RBP13.66□□□□□ -0.22
DDX41-210ENST00000509576 XYLT1Q86Y38 959 aa13.66□□□□□ -0.22
DDX41-210ENST00000509576 FAM71AQ8IYT1 594 aa13.66□□□□□ -0.22
DDX41-210ENST00000509576 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.66□□□□□ -0.22
DDX41-210ENST00000509576 HDAC8Q9BY41 377 aa13.66□□□□□ -0.22
DDX41-210ENST00000509576 TMEM59LQ9UK28 342 aa13.66□□□□□ -0.22
DDX41-210ENST00000509576 DNAJC12Q9UKB3 198 aa13.66□□□□□ -0.22
DDX41-210ENST00000509576 SSUH2Q9Y2M2 353 aa13.66□□□□□ -0.22
DDX41-210ENST00000509576 FADS3Q9Y5Q0 445 aa13.66□□□□□ -0.22
DDX41-210ENST00000509576 TK2O00142 265 aa13.65□□□□□ -0.22
DDX41-210ENST00000509576 LZTS3O60299 673 aaPredicted RBP13.65□□□□□ -0.22
DDX41-210ENST00000509576 CSO75390 466 aaKnown RBP13.65□□□□□ -0.22
DDX41-210ENST00000509576 PAK4O96013 591 aaPredicted RBP13.65□□□□□ -0.22
DDX41-210ENST00000509576 KRT10P13645 584 aa13.65□□□□□ -0.22
DDX41-210ENST00000509576 ADRB3P13945 408 aa13.65□□□□□ -0.22
DDX41-210ENST00000509576 ACVRL1P37023 503 aa13.65□□□□□ -0.22
DDX41-210ENST00000509576 GABRB2P47870 512 aa13.65□□□□□ -0.22
DDX41-210ENST00000509576 PDX1P52945 283 aa13.65□□□□□ -0.22
DDX41-210ENST00000509576 OXCT1P55809 520 aa13.65□□□□□ -0.22
DDX41-210ENST00000509576 CXADRP78310 365 aa13.65□□□□□ -0.22
DDX41-210ENST00000509576 DAB2P98082 770 aa13.65□□□□□ -0.22
DDX41-210ENST00000509576 EIF2B5Q13144 721 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms