RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 NR1H4Q96RI1 486 aaPredicted RBP18.22■□□□□ 0.51
CCHCR1-228ENST00000509552 VCX3BQ9H321 246 aa18.22■□□□□ 0.51
CCHCR1-228ENST00000509552 RUVBL2Q9Y230 463 aaKnown RBP18.22■□□□□ 0.51
CCHCR1-228ENST00000509552 SCN4AP35499 1836 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 TK2O00142 265 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 HDAC3O15379 428 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 DDHD2O94830 711 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 COL6A2P12110 1019 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 GLDCP23378 1020 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 DNAJB1P25685 340 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 ASPHQ12797 758 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 SEL1L3Q68CR1 1132 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 FAM171BQ6P995 826 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 DHDDSQ86SQ9 333 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 FBXW8Q8N3Y1 598 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 PPHLN1Q8NEY8 458 aaKnown RBP18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 MAPK15Q8TD08 544 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 CCDC124Q96CT7 223 aaKnown RBP18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 PPP1R2P1Q96PQ5 205 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 FCRL5Q96RD9 977 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 PAAF1Q9BRP4 392 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 C1QTNF1Q9BXJ1 281 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 MATN2O00339 956 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 PHGDHO43175 533 aaKnown RBP18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 THRAP10827 490 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 MPSTP25325 297 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 POLD2P49005 469 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 CSRP3P50461 194 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 TUBP50607 506 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 PRKAA1Q13131 559 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 AGMOQ6ZNB7 445 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 LZTR1Q8N653 840 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 IPMKQ8NFU5 416 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 SHKBP1Q8TBC3 707 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 OR52B2Q96RD2 323 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 RTP3Q9BQQ7 232 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 PPP1R12CQ9BZL4 782 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 YIPF3Q9GZM5 350 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 CATSPERBQ9H7T0 1116 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 GLOD4Q9HC38 313 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 ARHGEF38Q9NXL2 777 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 POMPQ9Y244 141 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 SSX2IPQ9Y2D8 614 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 ACOT9Q9Y305 439 aa18.21■□□□□ 0.51
CCHCR1-228ENST00000509552 SLCO1B7G3V0H7 640 aa18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 FGF10O15520 208 aaPredicted RBP18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 AHSGP02765 367 aa18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 CHRNGP07510 517 aa18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 CTSHP09668 335 aa18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 GEMP55040 296 aa18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 CCNIQ14094 377 aa18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 POU6F1Q14863 301 aa18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 BRMS1LQ5PSV4 323 aa18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 ARHGAP36Q6ZRI8 547 aa18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 ACAD11Q709F0 780 aa18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 BEND5Q7L4P6 421 aa18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 GATA6Q92908 595 aa18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 HAPLN3Q96S86 360 aa18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 VTI1BQ9UEU0 232 aa18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 GOLGA8QA0A0J9YX86 632 aa18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 GOLGA8OA6NCC3 632 aa18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 GOLGA8NF8WBI6 632 aa18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 ZMPSTE24O75844 475 aa18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 B3GAT3O94766 335 aa18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 UPP2O95045 317 aa18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 VAPBO95292 243 aa18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 MT-CYBP00156 380 aaPredicted RBP18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 SLC35E2BP0CK96 405 aa18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 HTR7P34969 479 aa18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 AVPR1AP37288 418 aa18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 GLRBP48167 497 aa18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 NUMBP49757 651 aa18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 PEX6Q13608 980 aa18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 SLC41A1Q8IVJ1 513 aa18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 CNTN4Q8IWV2 1026 aa18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 STYXQ8WUJ0 223 aa18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 KCTD4Q8WVF5 259 aa18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 LENG8Q96PV6 779 aaPredicted RBP18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 FICDQ9BVA6 458 aa18.2■□□□□ 0.5
CCHCR1-228ENST00000509552 DOCK3Q8IZD9 2030 aa18.19■□□□□ 0.5
CCHCR1-228ENST00000509552 GPR182O15218 404 aa18.19■□□□□ 0.5
CCHCR1-228ENST00000509552 MATN3O15232 486 aa18.19■□□□□ 0.5
CCHCR1-228ENST00000509552 KPNA6O60684 536 aa18.19■□□□□ 0.5
CCHCR1-228ENST00000509552 PIGNO95427 931 aa18.19■□□□□ 0.5
CCHCR1-228ENST00000509552 SERPINB5P36952 375 aa18.19■□□□□ 0.5
CCHCR1-228ENST00000509552 RGS2P41220 211 aa18.19■□□□□ 0.5
CCHCR1-228ENST00000509552 NAGLUP54802 743 aa18.19■□□□□ 0.5
CCHCR1-228ENST00000509552 CDC16Q13042 620 aa18.19■□□□□ 0.5
CCHCR1-228ENST00000509552 ARL13AQ5H913 290 aaPredicted RBP18.19■□□□□ 0.5
CCHCR1-228ENST00000509552 POTEHQ6S545 545 aa18.19■□□□□ 0.5
CCHCR1-228ENST00000509552 TMC7Q7Z402 723 aa18.19■□□□□ 0.5
CCHCR1-228ENST00000509552 HPS6Q86YV9 775 aa18.19■□□□□ 0.5
CCHCR1-228ENST00000509552 CCDC117Q8IWD4 279 aaPredicted RBP18.19■□□□□ 0.5
CCHCR1-228ENST00000509552 FSTL5Q8N475 847 aaPredicted RBP18.19■□□□□ 0.5
CCHCR1-228ENST00000509552 PTCD2Q8WV60 388 aaKnown RBP18.19■□□□□ 0.5
CCHCR1-228ENST00000509552 CNDP1Q96KN2 507 aa18.19■□□□□ 0.5
CCHCR1-228ENST00000509552 IL12RB2Q99665 862 aa18.19■□□□□ 0.5
CCHCR1-228ENST00000509552 UBE2OQ9C0C9 1292 aaKnown RBP18.19■□□□□ 0.5
CCHCR1-228ENST00000509552 ABCC13Q9NSE7 274 aa18.19■□□□□ 0.5
CCHCR1-228ENST00000509552 DSEQ9UL01 958 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms