RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 SCG3Q8WXD2 468 aaKnown RBP7.38□□□□□ -1.23
TOPBP1-207ENST00000509162 FAM131CQ96AQ9 280 aa7.38□□□□□ -1.23
TOPBP1-207ENST00000509162 TBC1D31Q96DN5 1066 aa7.38□□□□□ -1.23
TOPBP1-207ENST00000509162 IQCDQ96DY2 449 aa7.38□□□□□ -1.23
TOPBP1-207ENST00000509162 HMCESQ96FZ2 354 aa7.38□□□□□ -1.23
TOPBP1-207ENST00000509162 FAM129BQ96TA1 746 aa7.38□□□□□ -1.23
TOPBP1-207ENST00000509162 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.38□□□□□ -1.23
TOPBP1-207ENST00000509162 ACE2Q9BYF1 805 aaPredicted RBP7.38□□□□□ -1.23
TOPBP1-207ENST00000509162 FAM126AQ9BYI3 521 aaPredicted RBP7.38□□□□□ -1.23
TOPBP1-207ENST00000509162 ZYG11BQ9C0D3 744 aa7.38□□□□□ -1.23
TOPBP1-207ENST00000509162 LRRC19Q9H756 370 aa7.38□□□□□ -1.23
TOPBP1-207ENST00000509162 CAAP1Q9H8G2 361 aa7.38□□□□□ -1.23
TOPBP1-207ENST00000509162 ZFAND3Q9H8U3 227 aa7.38□□□□□ -1.23
TOPBP1-207ENST00000509162 PDFQ9HBH1 243 aa7.38□□□□□ -1.23
TOPBP1-207ENST00000509162 PCDH18Q9HCL0 1135 aa7.38□□□□□ -1.23
TOPBP1-207ENST00000509162 FSCN3Q9NQT6 498 aa7.38□□□□□ -1.23
TOPBP1-207ENST00000509162 PARVAQ9NVD7 372 aa7.38□□□□□ -1.23
TOPBP1-207ENST00000509162 OR12D3Q9UGF7 316 aa7.38□□□□□ -1.23
TOPBP1-207ENST00000509162 ANAPC7Q9UJX3 599 aa7.38□□□□□ -1.23
TOPBP1-207ENST00000509162 CYP8B1Q9UNU6 501 aa7.38□□□□□ -1.23
TOPBP1-207ENST00000509162 AP4E1Q9UPM8 1137 aa7.38□□□□□ -1.23
TOPBP1-207ENST00000509162 HYOU1Q9Y4L1 999 aa7.38□□□□□ -1.23
TOPBP1-207ENST00000509162 NUP205Q92621 2012 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 ANKRD62A6NC57 917 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 C3orf70A6NLC5 250 aaPredicted RBP7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 WASH4PA8MWX3 477 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 PATE3B3GLJ2 98 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 H0Y626 953 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 MUSKO15146 869 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 MFSD11O43934 449 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 SRGAP2O75044 1071 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 ATG13O75143 517 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 PROSCO94903 275 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 PEX11BO96011 259 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 EPHX1P07099 455 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 TMEM253P0C7T8 217 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 CCDC172P0C7W6 258 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 MYBL1P10243 752 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 RARAP10276 462 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 RHOQP17081 205 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 IL4RP24394 825 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 CDC25BP30305 580 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 L1CAMP32004 1257 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 GKP32189 559 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 DRD3P35462 400 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 RGRP47804 291 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 SNX16P57768 344 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 IHHQ14623 411 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 NAA30Q147X3 362 aaPredicted RBP7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 DPYSL2Q16555 572 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 PEAR1Q5VY43 1037 aaPredicted RBP7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 SCYL2Q6P3W7 929 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 C22orf39Q6P5X5 142 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 DCUN1D2Q6PH85 259 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 KIAA1324Q6UXG2 1013 aaKnown RBP7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 PRR23BQ6ZRT6 265 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 ARMCX6Q7L4S7 300 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 SLFN11Q7Z7L1 901 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 CCDC116Q8IYX3 515 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 STK40Q8N2I9 435 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 SH2D3CQ8N5H7 860 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 DEFB119Q8N690 84 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 OR2T3Q8NH03 318 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 ARHGEF2Q92974 986 aaKnown RBP7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 NKD2Q969F2 451 aaPredicted RBP7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 ARRDC3Q96B67 414 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 CELF6Q96J87 481 aaKnown RBP7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 CITED4Q96RK1 184 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 DDX50Q9BQ39 737 aaKnown RBP7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 HERPUD2Q9BSE4 406 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 SAP130Q9H0E3 1048 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 RSPH9Q9H1X1 276 aaPredicted RBP7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 TSPAN10Q9H1Z9 355 aaPredicted RBP7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 ETNK1Q9HBU6 452 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 CWC15Q9P013 229 aaKnown RBP7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 LHX3Q9UBR4 397 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 TRIM10Q9UDY6 481 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 DNAI1Q9UI46 699 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 HS3ST2Q9Y278 367 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 BZW2Q9Y6E2 419 aaKnown RBP7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 SCINQ9Y6U3 715 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 SPTBN4Q9H254 2564 aa7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 TP53BP1Q12888 1972 aaPredicted RBP7.37□□□□□ -1.23
TOPBP1-207ENST00000509162 WDFY3Q8IZQ1 3526 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 ILVBLA1L0T0 632 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 MID1O15344 667 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 CREB3O43889 395 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 LMNAP02545 664 aaKnown RBP7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 ASLP04424 464 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 POLR2EP19388 210 aaKnown RBP7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 MPSTP25325 297 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 EPHB2P29323 1055 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 ACSL1P33121 698 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 PCK1P35558 622 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 MAPKAPK2P49137 400 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 SERPINH1P50454 418 aaKnown RBP7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 TPMTP51580 245 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 RAB15P59190 212 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms