RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 CCDC110Q8TBZ0 833 aa10.58□□□□□ -0.72
RFC1-211ENST00000509084 WFDC5Q8TCV5 224 aa10.58□□□□□ -0.72
RFC1-211ENST00000509084 DNASE1L2Q92874 299 aa10.58□□□□□ -0.72
RFC1-211ENST00000509084 ALG14Q96F25 216 aa10.58□□□□□ -0.72
RFC1-211ENST00000509084 MSANTD3Q96H12 275 aa10.58□□□□□ -0.72
RFC1-211ENST00000509084 ZFYVE19Q96K21 471 aa10.58□□□□□ -0.72
RFC1-211ENST00000509084 LMLNQ96KR4 655 aa10.58□□□□□ -0.72
RFC1-211ENST00000509084 TEKT5Q96M29 485 aa10.58□□□□□ -0.72
RFC1-211ENST00000509084 CINPQ9BW66 212 aaPredicted RBP10.58□□□□□ -0.72
RFC1-211ENST00000509084 PLA2G2FQ9BZM2 168 aa10.58□□□□□ -0.72
RFC1-211ENST00000509084 POLR1EQ9GZS1 481 aaKnown RBP10.58□□□□□ -0.72
RFC1-211ENST00000509084 GBA3Q9H227 469 aa10.58□□□□□ -0.72
RFC1-211ENST00000509084 C10orf88Q9H8K7 445 aa10.58□□□□□ -0.72
RFC1-211ENST00000509084 TRPV5Q9NQA5 729 aa10.58□□□□□ -0.72
RFC1-211ENST00000509084 GDF3Q9NR23 364 aa10.58□□□□□ -0.72
RFC1-211ENST00000509084 ABCB8Q9NUT2 735 aa10.58□□□□□ -0.72
RFC1-211ENST00000509084 DNAJC17Q9NVM6 304 aaKnown RBP10.58□□□□□ -0.72
RFC1-211ENST00000509084 DEC1Q9P2X7 70 aa10.58□□□□□ -0.72
RFC1-211ENST00000509084 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.58□□□□□ -0.72
RFC1-211ENST00000509084 RSPH14Q9UHP6 348 aa10.58□□□□□ -0.72
RFC1-211ENST00000509084 SLC25A13Q9UJS0 675 aa10.58□□□□□ -0.72
RFC1-211ENST00000509084 SHOC2Q9UQ13 582 aa10.58□□□□□ -0.72
RFC1-211ENST00000509084 V9GYY5 206 aaPredicted RBP10.58□□□□□ -0.72
RFC1-211ENST00000509084 ERI2A8K979 691 aaKnown RBP10.57□□□□□ -0.72
RFC1-211ENST00000509084 E7EVH7 732 aa10.57□□□□□ -0.72
RFC1-211ENST00000509084 ARNTLO00327 626 aa10.57□□□□□ -0.72
RFC1-211ENST00000509084 PSMD3O43242 534 aa10.57□□□□□ -0.72
RFC1-211ENST00000509084 TULP3O75386 442 aa10.57□□□□□ -0.72
RFC1-211ENST00000509084 ZMPSTE24O75844 475 aa10.57□□□□□ -0.72
RFC1-211ENST00000509084 SEC31AO94979 1220 aaKnown RBP10.57□□□□□ -0.72
RFC1-211ENST00000509084 PEX11BO96011 259 aa10.57□□□□□ -0.72
RFC1-211ENST00000509084 ATP5BP06576 529 aaKnown RBP10.57□□□□□ -0.72
RFC1-211ENST00000509084 POLR2EP19388 210 aaKnown RBP10.57□□□□□ -0.72
RFC1-211ENST00000509084 CES1P23141 567 aa10.57□□□□□ -0.72
RFC1-211ENST00000509084 SP100P23497 879 aaPredicted RBP10.57□□□□□ -0.72
RFC1-211ENST00000509084 CD70P32970 193 aa10.57□□□□□ -0.72
RFC1-211ENST00000509084 VPS41P49754 854 aa10.57□□□□□ -0.72
RFC1-211ENST00000509084 BASP1P80723 227 aaKnown RBP10.57□□□□□ -0.72
RFC1-211ENST00000509084 MRPS25P82663 173 aaKnown RBP10.57□□□□□ -0.72
RFC1-211ENST00000509084 ARF5P84085 180 aa10.57□□□□□ -0.72
RFC1-211ENST00000509084 CDK16Q00536 496 aa10.57□□□□□ -0.72
RFC1-211ENST00000509084 PFKPQ01813 784 aa10.57□□□□□ -0.72
RFC1-211ENST00000509084 SEMA5AQ13591 1074 aa10.57□□□□□ -0.72
RFC1-211ENST00000509084 HLTFQ14527 1009 aaKnown RBP eCLIP10.57□□□□□ -0.725e-6■■□□□ 12.8
RFC1-211ENST00000509084 MORF4L2Q15014 288 aa10.57□□□□□ -0.72
RFC1-211ENST00000509084 MAP9Q49MG5 647 aa10.57□□□□□ -0.72
RFC1-211ENST00000509084 IZUMO3Q5VZ72 239 aa10.57□□□□□ -0.72
RFC1-211ENST00000509084 PPP1R21Q6ZMI0 780 aa10.57□□□□□ -0.72
RFC1-211ENST00000509084 B4GALNT4Q76KP1 1039 aa10.57□□□□□ -0.72
RFC1-211ENST00000509084 PPIL6Q8IXY8 311 aa10.57□□□□□ -0.72
RFC1-211ENST00000509084 GLIS1Q8NBF1 620 aa10.57□□□□□ -0.72
RFC1-211ENST00000509084 PSKH2Q96QS6 385 aa10.57□□□□□ -0.72
RFC1-211ENST00000509084 FRMD8Q9BZ67 464 aaPredicted RBP10.57□□□□□ -0.72
RFC1-211ENST00000509084 FOXP3Q9BZS1 431 aa10.57□□□□□ -0.72
RFC1-211ENST00000509084 TRIM31Q9BZY9 425 aa10.57□□□□□ -0.72
RFC1-211ENST00000509084 TSPYL1Q9H0U9 437 aa10.57□□□□□ -0.72
RFC1-211ENST00000509084 DPH5Q9H2P9 285 aa10.57□□□□□ -0.72
RFC1-211ENST00000509084 EIF2B3Q9NR50 452 aaKnown RBP10.57□□□□□ -0.72
RFC1-211ENST00000509084 RAB6BQ9NRW1 208 aa10.57□□□□□ -0.72
RFC1-211ENST00000509084 RBM22Q9NW64 420 aaKnown RBP eCLIP10.57□□□□□ -0.72
RFC1-211ENST00000509084 ARGLU1Q9NWB6 273 aaPredicted RBP10.57□□□□□ -0.72
RFC1-211ENST00000509084 MTRF1LQ9UGC7 380 aaKnown RBP10.57□□□□□ -0.72
RFC1-211ENST00000509084 PRKAG3Q9UGI9 489 aa10.57□□□□□ -0.72
RFC1-211ENST00000509084 VPS51Q9UID3 782 aa10.57□□□□□ -0.72
RFC1-211ENST00000509084 RAB21Q9UL25 225 aa10.57□□□□□ -0.72
RFC1-211ENST00000509084 TPX2Q9ULW0 747 aaKnown RBP10.57□□□□□ -0.72
RFC1-211ENST00000509084 SLC8A2Q9UPR5 921 aa10.57□□□□□ -0.72
RFC1-211ENST00000509084 AAR2Q9Y312 384 aaKnown RBP10.57□□□□□ -0.72
RFC1-211ENST00000509084 SNX24Q9Y343 169 aa10.57□□□□□ -0.72
RFC1-211ENST00000509084 COL4A3Q01955 1670 aa10.57□□□□□ -0.72
RFC1-211ENST00000509084 KIAA1549LQ6ZVL6 1849 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 ZBTB24O43167 697 aaPredicted RBP10.56□□□□□ -0.72
RFC1-211ENST00000509084 TIMM44O43615 452 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 ERLIN1O75477 346 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 ANXA9O76027 345 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 HLA-DQB2P05538 268 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 SRPRAP08240 638 aaKnown RBP10.56□□□□□ -0.72
RFC1-211ENST00000509084 NUDT7P0C024 238 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 ZSCAN5DPP0CG00 497 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 ETS1P14921 441 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 TPSB2P20231 275 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 IVDP26440 423 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 GJA4P35212 333 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 NNMTP40261 264 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 MAGEA6P43360 314 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 RPL21P46778 160 aaKnown RBP10.56□□□□□ -0.72
RFC1-211ENST00000509084 SERPINH1P50454 418 aaKnown RBP10.56□□□□□ -0.72
RFC1-211ENST00000509084 GEMP55040 296 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 SARNPP82979 210 aaKnown RBP10.56□□□□□ -0.72
RFC1-211ENST00000509084 SLC10A7Q0GE19 358 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 TPSAB1Q15661 275 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 SLC14A2Q15849 920 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 GAB4Q2WGN9 574 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 FUT11Q495W5 492 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 RALGPS1Q5JS13 557 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 MBLAC2Q68D91 279 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 APCDD1Q8J025 514 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 NAT16Q8N8M0 369 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 USP33Q8TEY7 942 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 LRRN4Q8WUT4 740 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms