RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 EPB41L5Q9HCM4 733 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 CLCA2Q9UQC9 943 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 HS3ST4Q9Y661 456 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 ZNF532Q9HCE3 1301 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 J3KTA2 159 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 FESP07332 822 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 ANXA8P13928 327 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 TACR1P25103 407 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 ACSL1P33121 698 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 ZNF143P52747 638 aaPredicted RBP3.99□□□□□ -1.77
NEDD4-209ENST00000508871 ROM1Q03395 351 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 CYP4F3Q08477 520 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 MZT1Q08AG7 82 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 KHDC1Q4VXA5 237 aaKnown RBP3.99□□□□□ -1.77
NEDD4-209ENST00000508871 TMEM240Q5SV17 173 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 ANXA8L1Q5VT79 327 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 OR6B2Q6IFH4 312 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 NFRKBQ6P4R8 1299 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 MTHFD1LQ6UB35 978 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 TMEM92Q6UXU6 159 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 SPOCD1Q6ZMY3 1216 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 OVCH2Q7RTZ1 564 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 CCNJLQ8IV13 435 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 SPATA20Q8TB22 786 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 ZNF669Q96BR6 464 aaPredicted RBP3.99□□□□□ -1.77
NEDD4-209ENST00000508871 HDAC11Q96DB2 347 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 WWP1Q9H0M0 922 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 ZMAT3Q9HA38 289 aaKnown RBP3.99□□□□□ -1.77
NEDD4-209ENST00000508871 RC3H2Q9HBD1 1191 aaKnown RBP3.99□□□□□ -1.77
NEDD4-209ENST00000508871 USP40Q9NVE5 1235 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 STK39Q9UEW8 545 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 STAP1Q9ULZ2 295 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 GDAQ9Y2T3 454 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 USP3Q9Y6I4 520 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.99□□□□□ -1.77
NEDD4-209ENST00000508871 ESYT2A0FGR8 921 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 C5orf51A6NDU8 294 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 GOLGA8MH3BSY2 632 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 HBP1O60381 514 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 ETS1P14921 441 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 HIBADHP31937 336 aaKnown RBP3.99□□□□□ -1.77
NEDD4-209ENST00000508871 PSMC2P35998 433 aaKnown RBP3.99□□□□□ -1.77
NEDD4-209ENST00000508871 GNAQP50148 359 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 ZNF81P51508 661 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 MAP2K6P52564 334 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 TIMM10P62072 90 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 SF1Q15637 639 aaKnown RBP3.99□□□□□ -1.77
NEDD4-209ENST00000508871 LRIT3Q3SXY7 679 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 CFAP221Q4G0U5 840 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 FDX2Q6P4F2 183 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 MSANTD1Q6ZTZ1 278 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 DGLUCYQ7Z3D6 616 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 PIWIL3Q7Z3Z3 882 aaKnown RBP3.99□□□□□ -1.77
NEDD4-209ENST00000508871 SGMS1Q86VZ5 419 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 LRRC6Q86X45 466 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 TRIM59Q8IWR1 403 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 SCYL3Q8IZE3 742 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 FBXO39Q8N4B4 442 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 FAM71DQ8N9W8 422 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 SMG7Q92540 1137 aaKnown RBP3.99□□□□□ -1.77
NEDD4-209ENST00000508871 LRRC45Q96CN5 670 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 HIST1H2AHQ96KK5 128 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 RBM14Q96PK6 669 aaKnown RBP3.99□□□□□ -1.77
NEDD4-209ENST00000508871 HIST1H2AJQ99878 128 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 MYL10Q9BUA6 226 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 YIPF2Q9BWQ6 316 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 WWOXQ9NZC7 414 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 DNAJB11Q9UBS4 358 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 KIAA1257Q9ULG3 409 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 VPS4AQ9UN37 437 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 KCNK7Q9Y2U2 307 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 FAM205AQ6ZU69 1335 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 SLX4Q8IY92 1834 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 A0A0B4J203 849 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 GALR2O43603 387 aaPredicted RBP3.99□□□□□ -1.77
NEDD4-209ENST00000508871 LCA5LO95447 670 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 ZBTB11O95625 1053 aaPredicted RBP3.99□□□□□ -1.77
NEDD4-209ENST00000508871 IGFBP1P08833 259 aaPredicted RBP3.99□□□□□ -1.77
NEDD4-209ENST00000508871 C5AR1P21730 350 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 SFNP31947 248 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 CPT1AP50416 773 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 ARSEP51690 589 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 RAB1AP62820 205 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 TTC38Q5R3I4 469 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 PRR5LQ6MZQ0 368 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 WDR73Q6P4I2 378 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 C16orf54Q6UWD8 224 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 CLEC9AQ6UXN8 241 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 COMTD1Q86VU5 262 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 MB21D1Q8N884 522 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 NAT8LQ8N9F0 302 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 SNX22Q96L94 193 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 ZBED2Q9BTP6 218 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 IDI2Q9BXS1 227 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 NAPBQ9H115 298 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 SMG5Q9UPR3 1016 aaKnown RBP3.99□□□□□ -1.77
NEDD4-209ENST00000508871 KCNJ18B7U540 433 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 GOLGA8KD6RF30 607 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 PLOD2O00469 737 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 SH2B2O14492 632 aaPredicted RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms