RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 HEPHQ9BQS7 1158 aa13.89□□□□□ -0.19
CCHCR1-227ENST00000508852 MAGEH1Q9H213 219 aa13.89□□□□□ -0.19
CCHCR1-227ENST00000508852 GANQ9H2C0 597 aa13.89□□□□□ -0.19
CCHCR1-227ENST00000508852 METTL5Q9NRN9 209 aaKnown RBP13.89□□□□□ -0.19
CCHCR1-227ENST00000508852 LMBRD1Q9NUN5 540 aa13.89□□□□□ -0.19
CCHCR1-227ENST00000508852 TAB2Q9NYJ8 693 aa13.89□□□□□ -0.19
CCHCR1-227ENST00000508852 MPP6Q9NZW5 540 aa13.89□□□□□ -0.19
CCHCR1-227ENST00000508852 NOCTQ9UK39 431 aaKnown RBP13.89□□□□□ -0.19
CCHCR1-227ENST00000508852 HS3ST3A1Q9Y663 406 aa13.89□□□□□ -0.19
CCHCR1-227ENST00000508852 PKD1L2Q7Z442 2459 aa13.89□□□□□ -0.19
CCHCR1-227ENST00000508852 A0A0D9SEW6 157 aa13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 A0A1W2PQU0 124 aa13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 AP1G1O43747 822 aa13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 SNAP91O60641 907 aa13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 MT-CO1P00395 513 aa13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 ALPPL2P10696 532 aa13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 KRT3P12035 628 aa13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 CKMT2P17540 419 aa13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 TFE3P19532 575 aaPredicted RBP13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 CDK11BP21127 795 aaKnown RBP13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 RRM1P23921 792 aa13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 ITGB7P26010 798 aa13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 MAT2AP31153 395 aaKnown RBP13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 ADRA1BP35368 520 aa13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 AIF1P55008 147 aa13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 JAM2P57087 298 aa13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 RPS21P63220 83 aaKnown RBP13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 E2F1Q01094 437 aa13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 FMO1Q01740 532 aa13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 MYL5Q02045 173 aa13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 POLD3Q15054 466 aaPredicted RBP13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 CARD16Q5EG05 197 aa13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 ARSIQ5FYB1 569 aa13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 SFMBT2Q5VUG0 894 aa13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 FBXL19Q6PCT2 694 aa13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 RBM43Q6ZSC3 357 aaKnown RBP13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 GATAD2AQ86YP4 633 aa13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 EID2Q8N6I1 236 aa13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 TMEM145Q8NBT3 493 aa13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 CASKIN2Q8WXE0 1202 aa13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 PCMTD1Q96MG8 357 aaPredicted RBP13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 SELENOOQ9BVL4 669 aa13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 ANLNQ9NQW6 1124 aa13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 FAM207AQ9NSI2 230 aaPredicted RBP13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 KLHL11Q9NVR0 708 aa13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 ADAM22Q9P0K1 906 aa13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 ZZEF1O43149 2961 aa13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 DMXL2Q8TDJ6 3036 aa13.88□□□□□ -0.19
CCHCR1-227ENST00000508852 CHD5Q8TDI0 1954 aa13.87□□□□□ -0.19
CCHCR1-227ENST00000508852 NEMP2A6NFY4 417 aa13.87□□□□□ -0.19
CCHCR1-227ENST00000508852 C2CD4BA6NLJ0 364 aa13.87□□□□□ -0.19
CCHCR1-227ENST00000508852 I6L893 689 aaPredicted RBP13.87□□□□□ -0.19
CCHCR1-227ENST00000508852 LEFTY1O75610 366 aa13.87□□□□□ -0.19
CCHCR1-227ENST00000508852 PCDH8O95206 1070 aa13.87□□□□□ -0.19
CCHCR1-227ENST00000508852 CTSLP07711 333 aa13.87□□□□□ -0.19
CCHCR1-227ENST00000508852 THEGLP0DJG4 465 aa13.87□□□□□ -0.19
CCHCR1-227ENST00000508852 JUPP14923 745 aa13.87□□□□□ -0.19
CCHCR1-227ENST00000508852 L1CAMP32004 1257 aa13.87□□□□□ -0.19
CCHCR1-227ENST00000508852 TAS2R38P59533 333 aa13.87□□□□□ -0.19
CCHCR1-227ENST00000508852 SNRPD1P62314 119 aaKnown RBP13.87□□□□□ -0.19
CCHCR1-227ENST00000508852 ATP11AP98196 1134 aa13.87□□□□□ -0.19
CCHCR1-227ENST00000508852 RAD51Q06609 339 aa13.87□□□□□ -0.19
CCHCR1-227ENST00000508852 ZNF211Q13398 564 aaPredicted RBP13.87□□□□□ -0.19
CCHCR1-227ENST00000508852 SHBQ15464 509 aa13.87□□□□□ -0.19
CCHCR1-227ENST00000508852 DPY19L3Q6ZPD9 716 aa13.87□□□□□ -0.19
CCHCR1-227ENST00000508852 PHF13Q86YI8 300 aaPredicted RBP13.87□□□□□ -0.19
CCHCR1-227ENST00000508852 OR7D4Q8NG98 312 aa13.87□□□□□ -0.19
CCHCR1-227ENST00000508852 RXFP2Q8WXD0 754 aa13.87□□□□□ -0.19
CCHCR1-227ENST00000508852 CENPIQ92674 756 aaPredicted RBP13.87□□□□□ -0.19
CCHCR1-227ENST00000508852 NTAN1Q96AB6 310 aa13.87□□□□□ -0.19
CCHCR1-227ENST00000508852 TBC1D31Q96DN5 1066 aa13.87□□□□□ -0.19
CCHCR1-227ENST00000508852 OSBPL1AQ9BXW6 950 aa13.87□□□□□ -0.19
CCHCR1-227ENST00000508852 NAT10Q9H0A0 1025 aaKnown RBP13.87□□□□□ -0.19
CCHCR1-227ENST00000508852 USP29Q9HBJ7 922 aa13.87□□□□□ -0.19
CCHCR1-227ENST00000508852 NLRC4Q9NPP4 1024 aa13.87□□□□□ -0.19
CCHCR1-227ENST00000508852 SCUBE2Q9NQ36 999 aa13.87□□□□□ -0.19
CCHCR1-227ENST00000508852 TMEM248Q9NWD8 314 aa13.87□□□□□ -0.19
CCHCR1-227ENST00000508852 ZNF212Q9UDV6 495 aa13.87□□□□□ -0.19
CCHCR1-227ENST00000508852 LIMA1Q9UHB6 759 aaKnown RBP13.87□□□□□ -0.19
CCHCR1-227ENST00000508852 LHX6Q9UPM6 363 aa13.87□□□□□ -0.19
CCHCR1-227ENST00000508852 GOLGA4Q13439 2230 aaKnown RBP13.87□□□□□ -0.19
CCHCR1-227ENST00000508852 TRPM6Q9BX84 2022 aa13.86□□□□□ -0.19
CCHCR1-227ENST00000508852 ACACAQ13085 2346 aa13.86□□□□□ -0.19
CCHCR1-227ENST00000508852 KNTC1P50748 2209 aa13.86□□□□□ -0.19
CCHCR1-227ENST00000508852 TRABD2BA6NFA1 517 aa13.86□□□□□ -0.19
CCHCR1-227ENST00000508852 LRRC10BA6NIK2 292 aa13.86□□□□□ -0.19
CCHCR1-227ENST00000508852 A6NNZ2 444 aa13.86□□□□□ -0.19
CCHCR1-227ENST00000508852 K7ERQ8 282 aa13.86□□□□□ -0.19
CCHCR1-227ENST00000508852 PLK4O00444 970 aa13.86□□□□□ -0.19
CCHCR1-227ENST00000508852 WNT9AO14904 365 aa13.86□□□□□ -0.19
CCHCR1-227ENST00000508852 SLC31A1O15431 190 aa13.86□□□□□ -0.19
CCHCR1-227ENST00000508852 SMAD6O43541 496 aaKnown RBP13.86□□□□□ -0.19
CCHCR1-227ENST00000508852 TSPAN6O43657 245 aa13.86□□□□□ -0.19
CCHCR1-227ENST00000508852 RAMP2O60895 175 aa13.86□□□□□ -0.19
CCHCR1-227ENST00000508852 ZMPSTE24O75844 475 aa13.86□□□□□ -0.19
CCHCR1-227ENST00000508852 GSRP00390 522 aa13.86□□□□□ -0.19
CCHCR1-227ENST00000508852 UNGP13051 313 aaPredicted RBP13.86□□□□□ -0.19
CCHCR1-227ENST00000508852 ADRB3P13945 408 aa13.86□□□□□ -0.19
CCHCR1-227ENST00000508852 HTR7P34969 479 aa13.86□□□□□ -0.19
CCHCR1-227ENST00000508852 NUMBP49757 651 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms