RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 CASP10Q92851 521 aa11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 GATA6Q92908 595 aa11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 CMTM5Q96DZ9 223 aa11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 CRISPLD2Q9H0B8 497 aa11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 ABCC13Q9NSE7 274 aa11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 IL1RAPL1Q9NZN1 696 aa11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 PCDH10Q9P2E7 1040 aa11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 TXNDC16Q9P2K2 825 aa11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 MYO18AQ92614 2054 aaKnown RBP11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 MYO16Q9Y6X6 1858 aa11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 A0A1W2PQH9 124 aa11.21□□□□□ -0.61
SH3RF1-203ENST00000508685 C2orf71A6NGG8 1288 aa11.21□□□□□ -0.61
SH3RF1-203ENST00000508685 SYN3O14994 580 aa11.21□□□□□ -0.61
SH3RF1-203ENST00000508685 IRAK2O43187 625 aa11.21□□□□□ -0.61
SH3RF1-203ENST00000508685 PLIN3O60664 434 aa11.21□□□□□ -0.61
SH3RF1-203ENST00000508685 SMIM24O75264 130 aa11.21□□□□□ -0.61
SH3RF1-203ENST00000508685 SRGAP2BP0DMP2 458 aa11.21□□□□□ -0.61
SH3RF1-203ENST00000508685 GLUD2P49448 558 aa11.21□□□□□ -0.61
SH3RF1-203ENST00000508685 ALDH18A1P54886 795 aaKnown RBP11.21□□□□□ -0.61
SH3RF1-203ENST00000508685 DSG1Q02413 1049 aa11.21□□□□□ -0.61
SH3RF1-203ENST00000508685 PDK1Q15118 436 aa11.21□□□□□ -0.61
SH3RF1-203ENST00000508685 FSCBQ5H9T9 825 aa11.21□□□□□ -0.61
SH3RF1-203ENST00000508685 METTL21CQ5VZV1 264 aa11.21□□□□□ -0.61
SH3RF1-203ENST00000508685 PACS1Q6VY07 963 aa11.21□□□□□ -0.61
SH3RF1-203ENST00000508685 DCP1BQ8IZD4 617 aaKnown RBP11.21□□□□□ -0.61
SH3RF1-203ENST00000508685 COLGALT1Q8NBJ5 622 aa11.21□□□□□ -0.61
SH3RF1-203ENST00000508685 DTX3LQ8TDB6 740 aa11.21□□□□□ -0.61
SH3RF1-203ENST00000508685 BCL7CQ8WUZ0 217 aaPredicted RBP11.21□□□□□ -0.61
SH3RF1-203ENST00000508685 PPP2R3CQ969Q6 453 aa11.21□□□□□ -0.61
SH3RF1-203ENST00000508685 SH3GL3Q99963 347 aa11.21□□□□□ -0.61
SH3RF1-203ENST00000508685 YIPF3Q9GZM5 350 aa11.21□□□□□ -0.61
SH3RF1-203ENST00000508685 SIK2Q9H0K1 926 aa11.21□□□□□ -0.61
SH3RF1-203ENST00000508685 CRISPLD1Q9H336 500 aa11.21□□□□□ -0.61
SH3RF1-203ENST00000508685 PIH1D1Q9NWS0 290 aaKnown RBP11.21□□□□□ -0.61
SH3RF1-203ENST00000508685 DLGAP2Q9P1A6 1054 aa11.21□□□□□ -0.61
SH3RF1-203ENST00000508685 SLC7A8Q9UHI5 535 aa11.21□□□□□ -0.61
SH3RF1-203ENST00000508685 OGDHLQ9ULD0 1010 aa11.21□□□□□ -0.61
SH3RF1-203ENST00000508685 NEU3Q9UQ49 428 aa11.21□□□□□ -0.61
SH3RF1-203ENST00000508685 SSX2IPQ9Y2D8 614 aa11.21□□□□□ -0.61
SH3RF1-203ENST00000508685 RAD54BQ9Y620 910 aa11.21□□□□□ -0.61
SH3RF1-203ENST00000508685 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.21□□□□□ -0.61
SH3RF1-203ENST00000508685 TBKBP1A7MCY6 615 aa11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 PRR5-ARHGAP8B1AHC4 643 aa11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 UGT1A9O60656 530 aa11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 H2AFYO75367 372 aaKnown RBP11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 ALDH2P05091 517 aa11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 POLBP06746 335 aa11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 KITP10721 976 aa11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 CHRM1P11229 460 aaPredicted RBP11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 CPB1P15086 417 aa11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 CYP2C18P33260 490 aa11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 COPAP53621 1224 aa11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 ARHGAP8P85298 464 aa11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 PDE1BQ01064 536 aa11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 MRPL58Q14197 206 aaKnown RBP11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 NFE2Q16621 373 aaPredicted RBP11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 SPANXN3Q5MJ09 141 aa11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 TEDDM1Q5T9Z0 273 aa11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 N4BP2L1Q5TBK1 243 aaPredicted RBP11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 OR52E8Q6IFG1 317 aa11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 FUT10Q6P4F1 479 aa11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 SLC30A9Q6PML9 568 aa11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 PDZD4Q76G19 769 aaPredicted RBP11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 TAS1R1Q7RTX1 841 aa11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 NPAS4Q8IUM7 802 aa11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 ZNF567Q8N184 647 aa11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 MPP5Q8N3R9 675 aa11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 PIP4K2CQ8TBX8 421 aa11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 ZNF483Q8TF39 744 aaPredicted RBP11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 ZFAND2BQ8WV99 257 aa11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 FUBP3Q96I24 572 aaKnown RBP eCLIP11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 PANX3Q96QZ0 392 aa11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 EPAS1Q99814 870 aa11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 CPNE1Q99829 537 aa11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 SMOC2Q9H3U7 446 aa11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 UGT1A7Q9HAW7 530 aa11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 UGT1A10Q9HAW8 530 aa11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 UGT1A8Q9HAW9 530 aa11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 DNAJC16Q9Y2G8 782 aa11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 SLC27A5Q9Y2P5 690 aa11.21□□□□□ -0.62
SH3RF1-203ENST00000508685 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.2□□□□□ -0.62
SH3RF1-203ENST00000508685 CCDC195A0A1B0GUA6 201 aa11.2□□□□□ -0.62
SH3RF1-203ENST00000508685 CCNT2O60583 730 aaKnown RBP11.2□□□□□ -0.62
SH3RF1-203ENST00000508685 UPP2O95045 317 aa11.2□□□□□ -0.62
SH3RF1-203ENST00000508685 MOCS2O96007 188 aaPredicted RBP11.2□□□□□ -0.62
SH3RF1-203ENST00000508685 FGF3P11487 239 aaPredicted RBP11.2□□□□□ -0.62
SH3RF1-203ENST00000508685 FGFR3P22607 806 aa11.2□□□□□ -0.62
SH3RF1-203ENST00000508685 PSMB4P28070 264 aa11.2□□□□□ -0.62
SH3RF1-203ENST00000508685 GP5P40197 560 aa11.2□□□□□ -0.62
SH3RF1-203ENST00000508685 CPA2P48052 419 aa11.2□□□□□ -0.62
SH3RF1-203ENST00000508685 HCAR3P49019 387 aa11.2□□□□□ -0.62
SH3RF1-203ENST00000508685 HARS2P49590 506 aaKnown RBP11.2□□□□□ -0.62
SH3RF1-203ENST00000508685 HK2P52789 917 aa11.2□□□□□ -0.62
SH3RF1-203ENST00000508685 SH3BGRP55822 239 aaPredicted RBP11.2□□□□□ -0.62
SH3RF1-203ENST00000508685 HNRNPDQ14103 355 aaKnown RBP11.2□□□□□ -0.62
SH3RF1-203ENST00000508685 ZNF280DQ6N043 979 aa11.2□□□□□ -0.62
SH3RF1-203ENST00000508685 RWDD4Q6NW29 188 aaKnown RBP11.2□□□□□ -0.62
SH3RF1-203ENST00000508685 CASC4Q6P4E1 433 aa11.2□□□□□ -0.62
SH3RF1-203ENST00000508685 BEND5Q7L4P6 421 aa11.2□□□□□ -0.62
SH3RF1-203ENST00000508685 NUP93Q8N1F7 819 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms