RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 RPP40O75818 363 aaKnown RBP3.18□□□□□ -1.9
GYPB-209ENST00000508618 BAG4O95429 457 aaKnown RBP3.18□□□□□ -1.9
GYPB-209ENST00000508618 ANXA6P08133 673 aa3.18□□□□□ -1.9
GYPB-209ENST00000508618 ZNF883P0CG24 379 aa3.18□□□□□ -1.9
GYPB-209ENST00000508618 GOLGA6DP0CG33 693 aa3.18□□□□□ -1.9
GYPB-209ENST00000508618 CDKN1AP38936 164 aa3.18□□□□□ -1.9
GYPB-209ENST00000508618 PMP22Q01453 160 aa3.18□□□□□ -1.9
GYPB-209ENST00000508618 GRM4Q14833 912 aa3.18□□□□□ -1.9
GYPB-209ENST00000508618 SERPINA11Q86U17 422 aa3.18□□□□□ -1.9
GYPB-209ENST00000508618 CD101Q93033 1021 aa3.18□□□□□ -1.9
GYPB-209ENST00000508618 TMEM18Q96B42 140 aa3.18□□□□□ -1.9
GYPB-209ENST00000508618 DDX21Q9NR30 783 aaKnown RBP eCLIP3.18□□□□□ -1.9
GYPB-209ENST00000508618 GOLGA6AQ9NYA3 693 aa3.18□□□□□ -1.9
GYPB-209ENST00000508618 MST1RQ04912 1400 aa3.18□□□□□ -1.9
GYPB-209ENST00000508618 IGHV4OR15-8A0A075B7B6 117 aa3.17□□□□□ -1.9
GYPB-209ENST00000508618 TBC1D3DA0A087WVF3 549 aa3.17□□□□□ -1.9
GYPB-209ENST00000508618 TBC1D3IA0A087WXS9 549 aa3.17□□□□□ -1.9
GYPB-209ENST00000508618 TBC1D3EA0A087X179 549 aa3.17□□□□□ -1.9
GYPB-209ENST00000508618 TBC1D3KA0A087X1G2 549 aa3.17□□□□□ -1.9
GYPB-209ENST00000508618 TBC1D3BA6NDS4 549 aa3.17□□□□□ -1.9
GYPB-209ENST00000508618 TBC1D3FA6NER0 549 aaPredicted RBP3.17□□□□□ -1.9
GYPB-209ENST00000508618 TBC1D3LB9A6J9 549 aa3.17□□□□□ -1.9
GYPB-209ENST00000508618 KPNA5O15131 536 aa3.17□□□□□ -1.9
GYPB-209ENST00000508618 GAGE7O76087 117 aa3.17□□□□□ -1.9
GYPB-209ENST00000508618 TBC1D3HP0C7X1 549 aa3.17□□□□□ -1.9
GYPB-209ENST00000508618 GAGE12FP0CL80 117 aa3.17□□□□□ -1.9
GYPB-209ENST00000508618 GAGE12GP0CL81 117 aa3.17□□□□□ -1.9
GYPB-209ENST00000508618 GAGE12IP0CL82 117 aa3.17□□□□□ -1.9
GYPB-209ENST00000508618 IGHV4-30-4P0DP06 118 aa3.17□□□□□ -1.9
GYPB-209ENST00000508618 FMO4P31512 558 aa3.17□□□□□ -1.9
GYPB-209ENST00000508618 STT3AP46977 705 aa3.17□□□□□ -1.9
GYPB-209ENST00000508618 GAGE1Q13065 139 aa3.17□□□□□ -1.9
GYPB-209ENST00000508618 GAGE4Q13068 117 aa3.17□□□□□ -1.9
GYPB-209ENST00000508618 GFOD2Q3B7J2 385 aa3.17□□□□□ -1.9
GYPB-209ENST00000508618 SETMARQ53H47 684 aaPredicted RBP3.17□□□□□ -1.9
GYPB-209ENST00000508618 XKR9Q5GH70 373 aa3.17□□□□□ -1.9
GYPB-209ENST00000508618 TBC1D3GQ6DHY5 549 aa3.17□□□□□ -1.9
GYPB-209ENST00000508618 TBC1D3CQ6IPX1 549 aa3.17□□□□□ -1.9
GYPB-209ENST00000508618 TBC1D3Q8IZP1 549 aaPredicted RBP3.17□□□□□ -1.9
GYPB-209ENST00000508618 RBFAQ8N0V3 343 aa3.17□□□□□ -1.9
GYPB-209ENST00000508618 IL17RCQ8NAC3 791 aa3.17□□□□□ -1.9
GYPB-209ENST00000508618 CLEC4CQ8WTT0 213 aa3.17□□□□□ -1.9
GYPB-209ENST00000508618 FAR1Q8WVX9 515 aa3.17□□□□□ -1.9
GYPB-209ENST00000508618 USP13Q92995 863 aaPredicted RBP3.17□□□□□ -1.9
GYPB-209ENST00000508618 RBM4Q9BWF3 364 aaKnown RBP3.17□□□□□ -1.9
GYPB-209ENST00000508618 STARD7Q9NQZ5 370 aa3.17□□□□□ -1.9
GYPB-209ENST00000508618 A0A1B0GVM2 712 aa3.16□□□□□ -1.9
GYPB-209ENST00000508618 SLC38A8A6NNN8 435 aa3.16□□□□□ -1.9
GYPB-209ENST00000508618 TSPAN6O43657 245 aa3.16□□□□□ -1.9
GYPB-209ENST00000508618 LARGE1O95461 756 aa3.16□□□□□ -1.9
GYPB-209ENST00000508618 S100BP04271 92 aaPredicted RBP3.16□□□□□ -1.9
GYPB-209ENST00000508618 ST3GAL1Q11201 340 aa3.16□□□□□ -1.9
GYPB-209ENST00000508618 MYBPC2Q14324 1141 aa3.16□□□□□ -1.9
GYPB-209ENST00000508618 CALCRLQ16602 461 aa3.16□□□□□ -1.9
GYPB-209ENST00000508618 ZACNQ401N2 412 aa3.16□□□□□ -1.9
GYPB-209ENST00000508618 SYTL3Q4VX76 610 aa3.16□□□□□ -1.9
GYPB-209ENST00000508618 C14orf177Q52M58 125 aa3.16□□□□□ -1.9
GYPB-209ENST00000508618 RHBDF2Q6PJF5 856 aa3.16□□□□□ -1.9
GYPB-209ENST00000508618 TTC17Q96AE7 1141 aa3.16□□□□□ -1.9
GYPB-209ENST00000508618 CCDC134Q9H6E4 229 aa3.16□□□□□ -1.9
GYPB-209ENST00000508618 CLK4Q9HAZ1 481 aaKnown RBP3.16□□□□□ -1.9
GYPB-209ENST00000508618 SLC22A11Q9NSA0 550 aa3.16□□□□□ -1.9
GYPB-209ENST00000508618 KIF1CO43896 1103 aaKnown RBP3.15□□□□□ -1.91
GYPB-209ENST00000508618 DDAH2O95865 285 aa3.15□□□□□ -1.91
GYPB-209ENST00000508618 CH25HO95992 272 aa3.15□□□□□ -1.91
GYPB-209ENST00000508618 CRYAAP02489 173 aa3.15□□□□□ -1.91
GYPB-209ENST00000508618 AFPP02771 609 aaKnown RBP3.15□□□□□ -1.91
GYPB-209ENST00000508618 PRPH2P23942 346 aa3.15□□□□□ -1.91
GYPB-209ENST00000508618 TYK2P29597 1187 aa3.15□□□□□ -1.91
GYPB-209ENST00000508618 DCTDP32321 178 aa3.15□□□□□ -1.91
GYPB-209ENST00000508618 ALDH18A1P54886 795 aaKnown RBP3.15□□□□□ -1.91
GYPB-209ENST00000508618 SLC35G1Q2M3R5 365 aa3.15□□□□□ -1.91
GYPB-209ENST00000508618 ARL13BQ3SXY8 428 aa3.15□□□□□ -1.91
GYPB-209ENST00000508618 FBXO38Q6PIJ6 1188 aa3.15□□□□□ -1.91
GYPB-209ENST00000508618 WDR5BQ86VZ2 330 aa3.15□□□□□ -1.91
GYPB-209ENST00000508618 TMC8Q8IU68 726 aa3.15□□□□□ -1.91
GYPB-209ENST00000508618 KRTAP7-1Q8IUC3 87 aa3.15□□□□□ -1.91
GYPB-209ENST00000508618 NRSN1Q8IZ57 195 aa3.15□□□□□ -1.91
GYPB-209ENST00000508618 OR1N1Q8NGS0 311 aa3.15□□□□□ -1.91
GYPB-209ENST00000508618 DOCK7Q96N67 2140 aa3.15□□□□□ -1.91
GYPB-209ENST00000508618 IFT27Q9BW83 186 aa3.15□□□□□ -1.91
GYPB-209ENST00000508618 SCRT2Q9NQ03 307 aa3.15□□□□□ -1.91
GYPB-209ENST00000508618 TM7SF3Q9NS93 570 aa3.15□□□□□ -1.91
GYPB-209ENST00000508618 OBP2AQ9NY56 170 aa3.15□□□□□ -1.91
GYPB-209ENST00000508618 SMAD5-AS1Q9Y6J3 95 aa3.15□□□□□ -1.91
GYPB-209ENST00000508618 KDM4EB2RXH2 506 aaPredicted RBP3.14□□□□□ -1.91
GYPB-209ENST00000508618 HNRNPDLO14979 420 aaKnown RBP3.14□□□□□ -1.91
GYPB-209ENST00000508618 ZNF500O60304 480 aaPredicted RBP3.14□□□□□ -1.91
GYPB-209ENST00000508618 PQBP1O60828 265 aaKnown RBP3.14□□□□□ -1.91
GYPB-209ENST00000508618 PMS2P2O95744 297 aa3.14□□□□□ -1.91
GYPB-209ENST00000508618 PEPDP12955 493 aa3.14□□□□□ -1.91
GYPB-209ENST00000508618 NPPBP16860 134 aa3.14□□□□□ -1.91
GYPB-209ENST00000508618 CDK7P50613 346 aa3.14□□□□□ -1.91
GYPB-209ENST00000508618 PMS2P11Q13670 270 aa3.14□□□□□ -1.91
GYPB-209ENST00000508618 DHX34Q14147 1143 aaKnown RBP3.14□□□□□ -1.91
GYPB-209ENST00000508618 TRIM60Q495X7 471 aa3.14□□□□□ -1.91
GYPB-209ENST00000508618 FAM69BQ5VUD6 431 aa3.14□□□□□ -1.91
GYPB-209ENST00000508618 PLA2G4FQ68DD2 849 aa3.14□□□□□ -1.91
GYPB-209ENST00000508618 TYW3Q6IPR3 259 aaKnown RBP3.14□□□□□ -1.91
GYPB-209ENST00000508618 ANKRD13AQ8IZ07 590 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms