RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 CD6P30203 668 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 MYL6P60660 151 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 PPM1JQ5JR12 505 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 TIGD7Q6NT04 549 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-208ENST00000508342 TRIM72Q6ZMU5 477 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 DET1Q7L5Y6 550 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 LONP2Q86WA8 852 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 RASSF3Q86WH2 238 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 ZNF280BQ86YH2 543 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 CFAP52Q8N1V2 620 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 EID2Q8N6I1 236 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 DEFB124Q8NES8 71 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 PJA1Q8NG27 643 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 SPPL3Q8TCT6 385 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 JADE3Q92613 823 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 EDAQ92838 391 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 MPP4Q96JB8 637 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 TREX2Q9BQ50 279 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-208ENST00000508342 WRAP53Q9BUR4 548 aaKnown RBP3.01□□□□□ -1.93
NEDD4-208ENST00000508342 ZCWPW1Q9H0M4 648 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 CDT1Q9H211 546 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 THAP9Q9H5L6 903 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 SLC2A4RGQ9NR83 387 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 ZNF236Q9UL36 1845 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 COL4A1P02462 1669 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 GSAPA4D1B5 854 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 LSM1O15116 133 aaKnown RBP3.01□□□□□ -1.93
NEDD4-208ENST00000508342 MLYCDO95822 493 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 ZNF24P17028 368 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 CYP2F1P24903 491 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 MZF1P28698 734 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-208ENST00000508342 AVPR2P30518 371 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 CASP14P31944 242 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 RARRES1P49788 294 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 CDK7P50613 346 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 GSCP56915 257 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-208ENST00000508342 ROR1Q01973 937 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 TAF10Q12962 218 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 TUBB2AQ13885 445 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 DCAF12L1Q5VU92 463 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 NAA35Q5VZE5 725 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 ZPBP2Q6X784 338 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 MARK2Q7KZI7 788 aaKnown RBP3.01□□□□□ -1.93
NEDD4-208ENST00000508342 LUZP2Q86TE4 346 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 HID1Q8IV36 788 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 FUBP3Q96I24 572 aaKnown RBP eCLIP3.01□□□□□ -1.93
NEDD4-208ENST00000508342 OSBPL9Q96SU4 736 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 TUBB2BQ9BVA1 445 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 ZCCHC2Q9C0B9 1178 aaKnown RBP3.01□□□□□ -1.93
NEDD4-208ENST00000508342 FAM124BQ9H5Z6 455 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-208ENST00000508342 PIF1Q9H611 641 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 ZNF334Q9HCZ1 680 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-208ENST00000508342 WDR6Q9NNW5 1121 aaKnown RBP3.01□□□□□ -1.93
NEDD4-208ENST00000508342 DCAF16Q9NXF7 216 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 RWDD2AQ9UIY3 292 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 DNPEPQ9ULA0 475 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 DUSP12Q9UNI6 340 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 GPR34Q9UPC5 381 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 C3orf70A6NLC5 250 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-208ENST00000508342 PSMD3O43242 534 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 GALR2O43603 387 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-208ENST00000508342 TLR5O60602 858 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 TM7SF2O76062 418 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 KRT7P08729 469 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 HSD3B1P14060 373 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 ALDH4A1P30038 563 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 PCK1P35558 622 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 ARL2P36404 184 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 DSG1Q02413 1049 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 ZNF252P-AS1Q0IIN9 211 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 XRCC4Q13426 336 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 ADAM15Q13444 863 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 UPP1Q16831 310 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 GRAMD1BQ3KR37 738 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 BBS9Q3SYG4 887 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 RALGPS2Q86X27 583 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-208ENST00000508342 TMEM145Q8NBT3 493 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 LRRC8CQ8TDW0 803 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 PYROXD1Q8WU10 500 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 CHAC2Q8WUX2 184 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 C17orf50Q8WW18 174 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 RAPGEF5Q92565 580 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 PLEKHA8Q96JA3 519 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 ZFYVE19Q96K21 471 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 PPP1R2P1Q96PQ5 205 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 CDC6Q99741 560 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 RTKNQ9BST9 563 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 TASP1Q9H6P5 420 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 CYP3A43Q9HB55 503 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 ATP13A1Q9HD20 1204 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 TMPRSS4Q9NRS4 437 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 H2AFY2Q9P0M6 372 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-208ENST00000508342 SPAG17Q6Q759 2223 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 DCDC2BA2VCK2 349 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 FAM205CA6NFA0 338 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 PDLIM1O00151 329 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 HS6ST1O60243 411 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 KRT38O76015 456 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 MT-ND3P03897 115 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 ALPIP09923 528 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms