RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 IGSF6O95976 241 aa10.44□□□□□ -0.74
HTT-204ENST00000508321 PDGFBP01127 241 aaPredicted RBP10.44□□□□□ -0.74
HTT-204ENST00000508321 FGGP02679 453 aa10.44□□□□□ -0.74
HTT-204ENST00000508321 C7P10643 843 aa10.44□□□□□ -0.74
HTT-204ENST00000508321 SRCP12931 536 aa10.44□□□□□ -0.74
HTT-204ENST00000508321 PECAM1P16284 738 aaPredicted RBP10.44□□□□□ -0.74
HTT-204ENST00000508321 GLDCP23378 1020 aa10.44□□□□□ -0.74
HTT-204ENST00000508321 PRKCHP24723 683 aa10.44□□□□□ -0.74
HTT-204ENST00000508321 CASQ1P31415 396 aa10.44□□□□□ -0.74
HTT-204ENST00000508321 IL12RB1P42701 662 aa10.44□□□□□ -0.74
HTT-204ENST00000508321 CTSOP43234 321 aaPredicted RBP10.44□□□□□ -0.74
HTT-204ENST00000508321 RECQLP46063 649 aaPredicted RBP10.44□□□□□ -0.74
HTT-204ENST00000508321 SNRPD1P62314 119 aaKnown RBP10.44□□□□□ -0.74
HTT-204ENST00000508321 IFI35P80217 286 aaPredicted RBP10.44□□□□□ -0.74
HTT-204ENST00000508321 CAMK2GQ13555 558 aaPredicted RBP10.44□□□□□ -0.74
HTT-204ENST00000508321 ZNF235Q14590 738 aa10.44□□□□□ -0.74
HTT-204ENST00000508321 GRM3Q14832 879 aa10.44□□□□□ -0.74
HTT-204ENST00000508321 SLC45A4Q5BKX6 768 aa10.44□□□□□ -0.74
HTT-204ENST00000508321 DRICH1Q6PGQ1 229 aaPredicted RBP10.44□□□□□ -0.74
HTT-204ENST00000508321 Q6ZS52 159 aa10.44□□□□□ -0.74
HTT-204ENST00000508321 SFTPA1Q8IWL2 248 aa10.44□□□□□ -0.74
HTT-204ENST00000508321 C17orf53Q8N3J3 647 aaPredicted RBP10.44□□□□□ -0.74
HTT-204ENST00000508321 TXNDC5Q8NBS9 432 aaKnown RBP10.44□□□□□ -0.74
HTT-204ENST00000508321 ACTL9Q8TC94 416 aa10.44□□□□□ -0.74
HTT-204ENST00000508321 ACTRT1Q8TDG2 376 aa10.44□□□□□ -0.74
HTT-204ENST00000508321 SORCS1Q8WY21 1168 aa10.44□□□□□ -0.74
HTT-204ENST00000508321 LRIG1Q96JA1 1093 aa10.44□□□□□ -0.74
HTT-204ENST00000508321 C16orf45Q96MC5 204 aaPredicted RBP10.44□□□□□ -0.74
HTT-204ENST00000508321 GDAP1L1Q96MZ0 367 aa10.44□□□□□ -0.74
HTT-204ENST00000508321 PSKH2Q96QS6 385 aa10.44□□□□□ -0.74
HTT-204ENST00000508321 LRFN3Q9BTN0 628 aa10.44□□□□□ -0.74
HTT-204ENST00000508321 CINPQ9BW66 212 aaPredicted RBP10.44□□□□□ -0.74
HTT-204ENST00000508321 HEMGNQ9BXL5 484 aa10.44□□□□□ -0.74
HTT-204ENST00000508321 EPHX3Q9H6B9 360 aa10.44□□□□□ -0.74
HTT-204ENST00000508321 PRMT8Q9NR22 394 aaPredicted RBP10.44□□□□□ -0.74
HTT-204ENST00000508321 RBM12Q9NTZ6 932 aaKnown RBP10.44□□□□□ -0.74
HTT-204ENST00000508321 CACNA2D2Q9NY47 1150 aa10.44□□□□□ -0.74
HTT-204ENST00000508321 HCN2Q9UL51 889 aa10.44□□□□□ -0.74
HTT-204ENST00000508321 FARP1Q9Y4F1 1045 aaPredicted RBP10.44□□□□□ -0.74
HTT-204ENST00000508321 ATG2BQ96BY7 2078 aa10.44□□□□□ -0.74
HTT-204ENST00000508321 ANKRD36A6QL64 1941 aa10.43□□□□□ -0.74
HTT-204ENST00000508321 MATN3O15232 486 aa10.43□□□□□ -0.74
HTT-204ENST00000508321 ADAM23O75077 832 aa10.43□□□□□ -0.74
HTT-204ENST00000508321 NEBLO76041 1014 aa10.43□□□□□ -0.74
HTT-204ENST00000508321 ALDH1A2O94788 518 aa10.43□□□□□ -0.74
HTT-204ENST00000508321 STK10O94804 968 aaKnown RBP10.43□□□□□ -0.74
HTT-204ENST00000508321 EPHX1P07099 455 aa10.43□□□□□ -0.74
HTT-204ENST00000508321 CES1P23141 567 aa10.43□□□□□ -0.74
HTT-204ENST00000508321 HOXA6P31267 233 aa10.43□□□□□ -0.74
HTT-204ENST00000508321 MMP13P45452 471 aa10.43□□□□□ -0.74
HTT-204ENST00000508321 CSNK1DP48730 415 aa10.43□□□□□ -0.74
HTT-204ENST00000508321 STK19P49842 368 aaPredicted RBP10.43□□□□□ -0.74
HTT-204ENST00000508321 RHOAP61586 193 aa10.43□□□□□ -0.74
HTT-204ENST00000508321 OTUD4Q01804 1114 aaKnown RBP10.43□□□□□ -0.74
HTT-204ENST00000508321 ZBTB16Q05516 673 aa10.43□□□□□ -0.74
HTT-204ENST00000508321 ADCY2Q08462 1091 aa10.43□□□□□ -0.74
HTT-204ENST00000508321 SFSWAPQ12872 951 aaKnown RBP10.43□□□□□ -0.74
HTT-204ENST00000508321 SLC10A2Q12908 348 aaPredicted RBP10.43□□□□□ -0.74
HTT-204ENST00000508321 LBRQ14739 615 aaKnown RBP10.43□□□□□ -0.74
HTT-204ENST00000508321 CRY1Q16526 586 aa10.43□□□□□ -0.74
HTT-204ENST00000508321 LONRF2Q1L5Z9 754 aa10.43□□□□□ -0.74
HTT-204ENST00000508321 TMEM31Q5JXX7 168 aa10.43□□□□□ -0.74
HTT-204ENST00000508321 MARC1Q5VT66 337 aa10.43□□□□□ -0.74
HTT-204ENST00000508321 HEATR6Q6AI08 1181 aaKnown RBP10.43□□□□□ -0.74
HTT-204ENST00000508321 LINGO4Q6UY18 593 aa10.43□□□□□ -0.74
HTT-204ENST00000508321 CAMKK1Q8N5S9 505 aa10.43□□□□□ -0.74
HTT-204ENST00000508321 TEX26Q8N6G2 289 aa10.43□□□□□ -0.74
HTT-204ENST00000508321 CCNYQ8ND76 341 aa10.43□□□□□ -0.74
HTT-204ENST00000508321 OR2AP1Q8NGE2 309 aa10.43□□□□□ -0.74
HTT-204ENST00000508321 OR2T3Q8NH03 318 aa10.43□□□□□ -0.74
HTT-204ENST00000508321 FRS2Q8WU20 508 aa10.43□□□□□ -0.74
HTT-204ENST00000508321 NKD2Q969F2 451 aaPredicted RBP10.43□□□□□ -0.74
HTT-204ENST00000508321 RPL10LQ96L21 214 aaKnown RBP10.43□□□□□ -0.74
HTT-204ENST00000508321 PPP1R2P1Q96PQ5 205 aa10.43□□□□□ -0.74
HTT-204ENST00000508321 MGME1Q9BQP7 344 aa10.43□□□□□ -0.74
HTT-204ENST00000508321 C11orf16Q9NQ32 467 aa10.43□□□□□ -0.74
HTT-204ENST00000508321 SCML1Q9UN30 329 aa10.43□□□□□ -0.74
HTT-204ENST00000508321 ZNF318Q5VUA4 2279 aa10.43□□□□□ -0.74
HTT-204ENST00000508321 BCLAF3A2AJT9 711 aaKnown RBP10.42□□□□□ -0.74
HTT-204ENST00000508321 C1QTNF3-AMACRE9PGA6 284 aa10.42□□□□□ -0.74
HTT-204ENST00000508321 J3KR12 359 aa10.42□□□□□ -0.74
HTT-204ENST00000508321 SGK1O00141 431 aa10.42□□□□□ -0.74
HTT-204ENST00000508321 RNASEH1O60930 286 aaKnown RBP10.42□□□□□ -0.74
HTT-204ENST00000508321 APBB3O95704 486 aa10.42□□□□□ -0.74
HTT-204ENST00000508321 CD160O95971 181 aa10.42□□□□□ -0.74
HTT-204ENST00000508321 PEX11BO96011 259 aa10.42□□□□□ -0.74
HTT-204ENST00000508321 PRNPP04156 253 aa10.42□□□□□ -0.74
HTT-204ENST00000508321 DCNP07585 359 aaKnown RBP10.42□□□□□ -0.74
HTT-204ENST00000508321 RBP3P10745 1247 aa10.42□□□□□ -0.74
HTT-204ENST00000508321 CCNB1P14635 433 aa10.42□□□□□ -0.74
HTT-204ENST00000508321 CXCR5P32302 372 aa10.42□□□□□ -0.74
HTT-204ENST00000508321 CXCL12P48061 93 aa10.42□□□□□ -0.74
HTT-204ENST00000508321 EIF3EP60228 445 aaKnown RBP10.42□□□□□ -0.74
HTT-204ENST00000508321 AP1S1P61966 158 aa10.42□□□□□ -0.74
HTT-204ENST00000508321 RAD51Q06609 339 aa10.42□□□□□ -0.74
HTT-204ENST00000508321 NSUN2Q08J23 767 aaKnown RBP eCLIP10.42□□□□□ -0.74
HTT-204ENST00000508321 AP1B1Q10567 949 aa10.42□□□□□ -0.74
HTT-204ENST00000508321 MTAPQ13126 283 aa10.42□□□□□ -0.74
HTT-204ENST00000508321 TUBB2AQ13885 445 aa10.42□□□□□ -0.74
HTT-204ENST00000508321 DLG2Q15700 870 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms