RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 HEXBP07686 556 aa10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 ABHD2P08910 425 aa10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 SRCP12931 536 aa10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 STMN1P16949 149 aa10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 SPAM1P38567 509 aa10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 OPRL1P41146 370 aa10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 TSPAN5P62079 268 aa10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 RACK1P63244 317 aaKnown RBP10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 IFITM3Q01628 133 aa10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 ILF2Q12905 390 aaKnown RBP10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 STAT4Q14765 748 aa10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 IQCCQ4KMZ1 466 aa10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 AARDQ4LEZ3 155 aa10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 HES5Q5TA89 166 aa10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 KANK2Q63ZY3 851 aa10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 KDELC1Q6UW63 502 aa10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 NSMFQ6X4W1 530 aa10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 CREB3L2Q70SY1 520 aa10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 MFSD4AQ8N468 514 aa10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 FIBCD1Q8N539 461 aa10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 DPP10Q8N608 796 aa10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 METTL13Q8N6R0 699 aa10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 MCUQ8NE86 351 aa10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 SRFBP1Q8NEF9 429 aaKnown RBP10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 TCP10LQ8TDR4 215 aa10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 PBXIP1Q96AQ6 731 aa10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 OXNAD1Q96HP4 312 aaPredicted RBP10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 BTN2A3PQ96KV6 586 aa10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 THTPAQ9BU02 230 aa10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 PACSIN1Q9BY11 444 aa10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 BCL2L14Q9BZR8 327 aa10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 SLCO1B3Q9NPD5 702 aa10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 PCDHGB4Q9UN71 923 aa10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 USTQ9Y2C2 406 aa10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 PCDHGB5Q9Y5G0 923 aa10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 DMRT1Q9Y5R6 373 aa10.97□□□□□ -0.65
PDLIM5-210ENST00000508216 KIF1AQ12756 1690 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 UBE4BO95155 1302 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 MROH5Q6ZUA9 1318 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 PMS2P1A4D2B8 440 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 LINC00587B1AMM8 73 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 STMND1H3BQB6 276 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 FCHO1O14526 889 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 ALBP02768 609 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 TIMP2P16035 220 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 ALOX12P18054 663 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 CASP1P29466 404 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 CYP2C18P33260 490 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 SLC1A4P43007 532 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 ATP5OP48047 213 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 SERPINH1P50454 418 aaKnown RBP10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 ARFIP1P53367 373 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 PSMD4P55036 377 aaKnown RBP10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 INCA1Q0VD86 236 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 PDK1Q15118 436 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 SLC14A2Q15849 920 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 MTHFSDQ2M296 383 aaKnown RBP10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 ZNF181Q2M3W8 571 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 RABGAP1LQ5R372 815 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 MPP7Q5T2T1 576 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 SLC9A4Q6AI14 798 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 KRT80Q6KB66 452 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 DCUN1D2Q6PH85 259 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 TRAF7Q6Q0C0 670 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 CATSPERGQ6ZRH7 1159 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 KCNK18Q7Z418 384 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 TFAP2DQ7Z6R9 452 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 ZER1Q7Z7L7 766 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 TLK2Q86UE8 772 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 RETREG3Q86VR2 466 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 KIF18BQ86Y91 864 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 ERO1BQ86YB8 467 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 JAMLQ86YT9 394 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 CCDC60Q8IWA6 550 aaPredicted RBP10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 SYCE1Q8N0S2 351 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 CCDC185Q8N715 623 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 SLC26A7Q8TE54 656 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 ERLEC1Q96DZ1 483 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 MCRS1Q96EZ8 462 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 FAM227BQ96M60 508 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 TEKT3Q9BXF9 490 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 NMUR1Q9HB89 426 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 TRIM39Q9HCM9 518 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 TM9SF3Q9HD45 589 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 PRDM11Q9NQV5 511 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 TRMT6Q9UJA5 497 aaKnown RBP10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 TMX2Q9Y320 296 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 PLLPQ9Y342 182 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 PTCH2Q9Y6C5 1203 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 KIF13BQ9NQT8 1826 aa10.96□□□□□ -0.65
PDLIM5-210ENST00000508216 ZNF142P52746 1687 aaPredicted RBP10.96□□□□□ -0.66
PDLIM5-210ENST00000508216 HEG1Q9ULI3 1381 aa10.96□□□□□ -0.66
PDLIM5-210ENST00000508216 TRAV20A0A0B4J274 112 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 A0A0D9SFI3 127 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 TMEM82A0PJX8 343 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 A8MVJ9 347 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 WRBO00258 174 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 AURKAO14965 403 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 BUB1O43683 1085 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 MFN2O95140 757 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms