RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 PIK3R6Q5UE93 754 aa14.74□□□□□ -0.05
DDX41-208ENST00000507955 NAIF1Q69YI7 327 aaPredicted RBP14.74□□□□□ -0.05
DDX41-208ENST00000507955 ITPRIPL1Q6GPH6 555 aa14.74□□□□□ -0.05
DDX41-208ENST00000507955 ZNF280DQ6N043 979 aa14.74□□□□□ -0.05
DDX41-208ENST00000507955 MIB1Q86YT6 1006 aa14.74□□□□□ -0.05
DDX41-208ENST00000507955 KBTBD2Q8IY47 623 aa14.74□□□□□ -0.05
DDX41-208ENST00000507955 PIWIL2Q8TC59 973 aaKnown RBP14.74□□□□□ -0.05
DDX41-208ENST00000507955 URGCPQ8TCY9 931 aa14.74□□□□□ -0.05
DDX41-208ENST00000507955 VPS39Q96JC1 886 aa14.74□□□□□ -0.05
DDX41-208ENST00000507955 YIPF3Q9GZM5 350 aa14.74□□□□□ -0.05
DDX41-208ENST00000507955 BRD8Q9H0E9 1235 aa14.74□□□□□ -0.05
DDX41-208ENST00000507955 OSBPL2Q9H1P3 480 aa14.74□□□□□ -0.05
DDX41-208ENST00000507955 RBM22Q9NW64 420 aaKnown RBP eCLIP14.74□□□□□ -0.05
DDX41-208ENST00000507955 STOML1Q9UBI4 398 aa14.74□□□□□ -0.05
DDX41-208ENST00000507955 NT5C1B-RDH14C9J2C7 533 aa14.73□□□□□ -0.05
DDX41-208ENST00000507955 E9PAM4 449 aa14.73□□□□□ -0.05
DDX41-208ENST00000507955 TK2O00142 265 aa14.73□□□□□ -0.05
DDX41-208ENST00000507955 RALBP11234 206 aa14.73□□□□□ -0.05
DDX41-208ENST00000507955 CPA3P15088 417 aa14.73□□□□□ -0.05
DDX41-208ENST00000507955 CCDC6Q16204 474 aa14.73□□□□□ -0.05
DDX41-208ENST00000507955 RAPH1Q70E73 1250 aa14.73□□□□□ -0.05
DDX41-208ENST00000507955 CIR1Q86X95 450 aaPredicted RBP14.73□□□□□ -0.05
DDX41-208ENST00000507955 SLC25A41Q8N5S1 370 aa14.73□□□□□ -0.05
DDX41-208ENST00000507955 RBM15BQ8NDT2 890 aaKnown RBP14.73□□□□□ -0.05
DDX41-208ENST00000507955 ACMSDQ8TDX5 336 aa14.73□□□□□ -0.05
DDX41-208ENST00000507955 SCG3Q8WXD2 468 aaKnown RBP14.73□□□□□ -0.05
DDX41-208ENST00000507955 TUBB6Q9BUF5 446 aa14.73□□□□□ -0.05
DDX41-208ENST00000507955 TBC1D13Q9NVG8 400 aa14.73□□□□□ -0.05
DDX41-208ENST00000507955 PTPRDP23468 1912 aa14.73□□□□□ -0.05
DDX41-208ENST00000507955 J3KR12 359 aa14.73□□□□□ -0.05
DDX41-208ENST00000507955 CCL22O00626 93 aa14.73□□□□□ -0.05
DDX41-208ENST00000507955 AURKAO14965 403 aa14.73□□□□□ -0.05
DDX41-208ENST00000507955 MYCP01106 439 aaPredicted RBP14.73□□□□□ -0.05
DDX41-208ENST00000507955 AHSGP02765 367 aa14.73□□□□□ -0.05
DDX41-208ENST00000507955 PGM1P36871 562 aa14.73□□□□□ -0.05
DDX41-208ENST00000507955 TM4SF4P48230 202 aa14.73□□□□□ -0.05
DDX41-208ENST00000507955 EFEMP1Q12805 493 aa14.73□□□□□ -0.05
DDX41-208ENST00000507955 THOC5Q13769 683 aaKnown RBP14.73□□□□□ -0.05
DDX41-208ENST00000507955 FAM219BQ5XKK7 198 aa14.73□□□□□ -0.05
DDX41-208ENST00000507955 FAM91A1Q658Y4 838 aa14.73□□□□□ -0.05
DDX41-208ENST00000507955 DENND5AQ6IQ26 1287 aa14.73□□□□□ -0.05
DDX41-208ENST00000507955 GLB1LQ6UWU2 654 aa14.73□□□□□ -0.05
DDX41-208ENST00000507955 LRRC74BQ6ZQY2 392 aa14.73□□□□□ -0.05
DDX41-208ENST00000507955 IL22Q9GZX6 179 aa14.73□□□□□ -0.05
DDX41-208ENST00000507955 WWP1Q9H0M0 922 aa14.73□□□□□ -0.05
DDX41-208ENST00000507955 GMIPQ9P107 970 aa14.73□□□□□ -0.05
DDX41-208ENST00000507955 DSEQ9UL01 958 aa14.73□□□□□ -0.05
DDX41-208ENST00000507955 SOX13Q9UN79 622 aa14.73□□□□□ -0.05
DDX41-208ENST00000507955 G3V2L1 256 aa14.72□□□□□ -0.05
DDX41-208ENST00000507955 SLC34A1Q06495 639 aa14.72□□□□□ -0.05
DDX41-208ENST00000507955 TUBB3Q13509 450 aa14.72□□□□□ -0.05
DDX41-208ENST00000507955 IHHQ14623 411 aa14.72□□□□□ -0.05
DDX41-208ENST00000507955 CNGA3Q16281 694 aa14.72□□□□□ -0.05
DDX41-208ENST00000507955 PSMD5Q16401 504 aa14.72□□□□□ -0.05
DDX41-208ENST00000507955 TSNAXIP1Q2TAA8 658 aa14.72□□□□□ -0.05
DDX41-208ENST00000507955 ALFQ53S48 1182 aa14.72□□□□□ -0.05
DDX41-208ENST00000507955 MFSD6LQ8IWD5 586 aa14.72□□□□□ -0.05
DDX41-208ENST00000507955 ZNF781Q8N8C0 355 aa14.72□□□□□ -0.05
DDX41-208ENST00000507955 TBL1YQ9BQ87 522 aa14.72□□□□□ -0.05
DDX41-208ENST00000507955 CCDC106Q9BWC9 280 aa14.72□□□□□ -0.05
DDX41-208ENST00000507955 SMOC2Q9H3U7 446 aa14.72□□□□□ -0.05
DDX41-208ENST00000507955 NOL6Q9H6R4 1146 aaKnown RBP14.72□□□□□ -0.05
DDX41-208ENST00000507955 RAD54BQ9Y620 910 aa14.72□□□□□ -0.05
DDX41-208ENST00000507955 TLL2Q9Y6L7 1015 aa14.72□□□□□ -0.05
DDX41-208ENST00000507955 NYNRINQ9P2P1 1898 aaKnown RBP14.72□□□□□ -0.05
DDX41-208ENST00000507955 HAPLN1P10915 354 aaPredicted RBP14.72□□□□□ -0.05
DDX41-208ENST00000507955 ARNTP27540 789 aa14.72□□□□□ -0.05
DDX41-208ENST00000507955 SEPT6Q14141 434 aa14.72□□□□□ -0.05
DDX41-208ENST00000507955 PRPSAP1Q14558 356 aa14.72□□□□□ -0.05
DDX41-208ENST00000507955 MANEALQ5VSG8 457 aa14.72□□□□□ -0.05
DDX41-208ENST00000507955 NAPEPLDQ6IQ20 393 aa14.72□□□□□ -0.05
DDX41-208ENST00000507955 ZNF354CQ86Y25 554 aa14.72□□□□□ -0.05
DDX41-208ENST00000507955 SLC41A1Q8IVJ1 513 aa14.72□□□□□ -0.05
DDX41-208ENST00000507955 LMNTD2Q8IXW0 634 aa14.72□□□□□ -0.05
DDX41-208ENST00000507955 CRISPLD1Q9H336 500 aa14.72□□□□□ -0.05
DDX41-208ENST00000507955 MMADHCQ9H3L0 296 aaPredicted RBP14.72□□□□□ -0.05
DDX41-208ENST00000507955 GLOD4Q9HC38 313 aa14.72□□□□□ -0.05
DDX41-208ENST00000507955 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.72□□□□□ -0.05
DDX41-208ENST00000507955 PLA2G4CQ9UP65 541 aa14.72□□□□□ -0.05
DDX41-208ENST00000507955 MTSS1O43312 755 aa14.71□□□□□ -0.05
DDX41-208ENST00000507955 ZMPSTE24O75844 475 aa14.71□□□□□ -0.05
DDX41-208ENST00000507955 SERPINE1P05121 402 aa14.71□□□□□ -0.05
DDX41-208ENST00000507955 CHRNGP07510 517 aa14.71□□□□□ -0.05
DDX41-208ENST00000507955 CCNCP24863 283 aa14.71□□□□□ -0.05
DDX41-208ENST00000507955 NPY2RP49146 381 aa14.71□□□□□ -0.05
DDX41-208ENST00000507955 SERPINB8P50452 374 aa14.71□□□□□ -0.05
DDX41-208ENST00000507955 ITKQ08881 620 aa14.71□□□□□ -0.05
DDX41-208ENST00000507955 TRAF7Q6Q0C0 670 aa14.71□□□□□ -0.05
DDX41-208ENST00000507955 CEP97Q8IW35 865 aa14.71□□□□□ -0.05
DDX41-208ENST00000507955 COLGALT2Q8IYK4 626 aa14.71□□□□□ -0.05
DDX41-208ENST00000507955 MYEOVQ96EZ4 313 aa14.71□□□□□ -0.05
DDX41-208ENST00000507955 FAM161BQ96MY7 647 aa14.71□□□□□ -0.05
DDX41-208ENST00000507955 HAPLN3Q96S86 360 aa14.71□□□□□ -0.05
DDX41-208ENST00000507955 VAT1Q99536 393 aa14.71□□□□□ -0.05
DDX41-208ENST00000507955 GPR62Q9BZJ7 368 aa14.71□□□□□ -0.05
DDX41-208ENST00000507955 MYLKQ15746 1914 aa14.71□□□□□ -0.05
DDX41-208ENST00000507955 KCNU1A8MYU2 1149 aa14.71□□□□□ -0.06
DDX41-208ENST00000507955 MATN3O15232 486 aa14.71□□□□□ -0.06
DDX41-208ENST00000507955 TADA2AO75478 443 aa14.71□□□□□ -0.06
DDX41-208ENST00000507955 SORBS2O94875 1100 aaKnown RBP14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms