RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 LRRC26Q2I0M4 334 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 PAN2Q504Q3 1202 aaKnown RBP7.35□□□□□ -1.23
CLCN3-206ENST00000507875 FAM205BPQ63HN1 556 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 ANKRD33Q7Z3H0 272 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 ZER1Q7Z7L7 766 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 COLGALT2Q8IYK4 626 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 THNSL1Q8IYQ7 743 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 LRRC52Q8N7C0 313 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 MSANTD4Q8NCY6 345 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 BEST2Q8NFU1 509 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 TNIP2Q8NFZ5 429 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 TRIM58Q8NG06 486 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 OR1N1Q8NGS0 311 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 STYXQ8WUJ0 223 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 FBLIM1Q8WUP2 373 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 NANOS1Q8WY41 292 aaKnown RBP7.35□□□□□ -1.23
CLCN3-206ENST00000507875 SHC3Q92529 594 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 MUL1Q969V5 352 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 CNDP1Q96KN2 507 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 SNX27Q96L92 541 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 CDADC1Q9BWV3 514 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 FOXP3Q9BZS1 431 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 TSPYL1Q9H0U9 437 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 ANKZF1Q9H8Y5 726 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 CYP4F12Q9HCS2 524 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 RIMKLBQ9ULI2 386 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 UBQLN1Q9UMX0 589 aaKnown RBP7.35□□□□□ -1.23
CLCN3-206ENST00000507875 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.34□□□□□ -1.23
CLCN3-206ENST00000507875 BTNL10A8MVZ5 291 aa7.34□□□□□ -1.23
CLCN3-206ENST00000507875 LACTBL1A8MY62 500 aa7.34□□□□□ -1.23
CLCN3-206ENST00000507875 ASS1P00966 412 aaKnown RBP7.34□□□□□ -1.23
CLCN3-206ENST00000507875 CHRNA1P02708 482 aa7.34□□□□□ -1.23
CLCN3-206ENST00000507875 NID1P14543 1247 aa7.34□□□□□ -1.23
CLCN3-206ENST00000507875 THPOP40225 353 aa7.34□□□□□ -1.23
CLCN3-206ENST00000507875 MTHFRP42898 656 aa7.34□□□□□ -1.23
CLCN3-206ENST00000507875 MAGEA1P43355 309 aa7.34□□□□□ -1.23
CLCN3-206ENST00000507875 PREPP48147 710 aa7.34□□□□□ -1.23
CLCN3-206ENST00000507875 BCAR1P56945 870 aa7.34□□□□□ -1.23
CLCN3-206ENST00000507875 RBP5P82980 135 aa7.34□□□□□ -1.23
CLCN3-206ENST00000507875 GFPT1Q06210 699 aaPredicted RBP7.34□□□□□ -1.23
CLCN3-206ENST00000507875 KLHL30Q0D2K2 578 aa7.34□□□□□ -1.23
CLCN3-206ENST00000507875 PRKG2Q13237 762 aa7.34□□□□□ -1.23
CLCN3-206ENST00000507875 DRAP1Q14919 205 aaPredicted RBP7.34□□□□□ -1.23
CLCN3-206ENST00000507875 ZBTB6Q15916 424 aa7.34□□□□□ -1.23
CLCN3-206ENST00000507875 ARHGAP15Q53QZ3 475 aa7.34□□□□□ -1.23
CLCN3-206ENST00000507875 UBXN11Q5T124 520 aa7.34□□□□□ -1.23
CLCN3-206ENST00000507875 IRF2BP2Q7Z5L9 587 aa7.34□□□□□ -1.23
CLCN3-206ENST00000507875 LRRTM4Q86VH4 590 aa7.34□□□□□ -1.23
CLCN3-206ENST00000507875 NRSN1Q8IZ57 195 aa7.34□□□□□ -1.23
CLCN3-206ENST00000507875 SPATA18Q8TC71 538 aa7.34□□□□□ -1.23
CLCN3-206ENST00000507875 ADAMTS18Q8TE60 1221 aa7.34□□□□□ -1.23
CLCN3-206ENST00000507875 AUTS2Q8WXX7 1259 aa7.34□□□□□ -1.23
CLCN3-206ENST00000507875 CPB2Q96IY4 423 aa7.34□□□□□ -1.23
CLCN3-206ENST00000507875 MRPL9Q9BYD2 267 aaKnown RBP7.34□□□□□ -1.23
CLCN3-206ENST00000507875 ACSS3Q9H6R3 686 aa7.34□□□□□ -1.23
CLCN3-206ENST00000507875 NFKBIL1Q9UBC1 381 aaPredicted RBP7.34□□□□□ -1.23
CLCN3-206ENST00000507875 PCOLCE2Q9UKZ9 415 aa7.34□□□□□ -1.23
CLCN3-206ENST00000507875 RAB21Q9UL25 225 aa7.34□□□□□ -1.23
CLCN3-206ENST00000507875 PIN4Q9Y237 131 aaKnown RBP7.34□□□□□ -1.23
CLCN3-206ENST00000507875 JRKLQ9Y4A0 524 aa7.34□□□□□ -1.23
CLCN3-206ENST00000507875 PJA2O43164 708 aa7.34□□□□□ -1.24
CLCN3-206ENST00000507875 TACC1O75410 805 aa7.34□□□□□ -1.24
CLCN3-206ENST00000507875 SKAP2O75563 359 aaPredicted RBP7.34□□□□□ -1.24
CLCN3-206ENST00000507875 SEC31AO94979 1220 aaKnown RBP7.34□□□□□ -1.24
CLCN3-206ENST00000507875 NDST3O95803 873 aa7.34□□□□□ -1.24
CLCN3-206ENST00000507875 BRAFP15056 766 aa7.34□□□□□ -1.24
CLCN3-206ENST00000507875 SYN1P17600 705 aa7.34□□□□□ -1.24
CLCN3-206ENST00000507875 ALAS2P22557 587 aa7.34□□□□□ -1.24
CLCN3-206ENST00000507875 TNFSF9P41273 254 aa7.34□□□□□ -1.24
CLCN3-206ENST00000507875 MAN2A2P49641 1150 aa7.34□□□□□ -1.24
CLCN3-206ENST00000507875 LIMK1P53667 647 aa7.34□□□□□ -1.24
CLCN3-206ENST00000507875 SP140Q13342 867 aa7.34□□□□□ -1.24
CLCN3-206ENST00000507875 TDRD12Q587J7 1177 aaKnown RBP7.34□□□□□ -1.24
CLCN3-206ENST00000507875 SLC39A5Q6ZMH5 540 aa7.34□□□□□ -1.24
CLCN3-206ENST00000507875 TRIM72Q6ZMU5 477 aa7.34□□□□□ -1.24
CLCN3-206ENST00000507875 FAM126BQ8IXS8 530 aa7.34□□□□□ -1.24
CLCN3-206ENST00000507875 FAM71AQ8IYT1 594 aa7.34□□□□□ -1.24
CLCN3-206ENST00000507875 TAS1R2Q8TE23 839 aa7.34□□□□□ -1.24
CLCN3-206ENST00000507875 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.34□□□□□ -1.24
CLCN3-206ENST00000507875 RGMAQ96B86 450 aa7.34□□□□□ -1.24
CLCN3-206ENST00000507875 VRK1Q99986 396 aaPredicted RBP7.34□□□□□ -1.24
CLCN3-206ENST00000507875 GDF15Q99988 308 aa7.34□□□□□ -1.24
CLCN3-206ENST00000507875 ELAC1Q9H777 363 aaKnown RBP7.34□□□□□ -1.24
CLCN3-206ENST00000507875 UBE2TQ9NPD8 197 aaPredicted RBP7.34□□□□□ -1.24
CLCN3-206ENST00000507875 AASSQ9UDR5 926 aa7.34□□□□□ -1.24
CLCN3-206ENST00000507875 ST3GAL5Q9UNP4 418 aa7.34□□□□□ -1.24
CLCN3-206ENST00000507875 ATP11BQ9Y2G3 1177 aa7.34□□□□□ -1.24
CLCN3-206ENST00000507875 PCDHGB5Q9Y5G0 923 aa7.34□□□□□ -1.24
CLCN3-206ENST00000507875 PCDHA3Q9Y5H8 950 aa7.34□□□□□ -1.24
CLCN3-206ENST00000507875 TIMM13Q9Y5L4 95 aaPredicted RBP7.34□□□□□ -1.24
CLCN3-206ENST00000507875 LTBP2Q14767 1821 aa7.33□□□□□ -1.24
CLCN3-206ENST00000507875 ARHGEF37A1IGU5 675 aa7.33□□□□□ -1.24
CLCN3-206ENST00000507875 TULP2O00295 520 aa7.33□□□□□ -1.24
CLCN3-206ENST00000507875 FGF10O15520 208 aaPredicted RBP7.33□□□□□ -1.24
CLCN3-206ENST00000507875 SRGAP2O75044 1071 aa7.33□□□□□ -1.24
CLCN3-206ENST00000507875 TGDSO95455 350 aa7.33□□□□□ -1.24
CLCN3-206ENST00000507875 VNN1O95497 513 aa7.33□□□□□ -1.24
CLCN3-206ENST00000507875 TUBBP07437 444 aa7.33□□□□□ -1.24
CLCN3-206ENST00000507875 EPXP11678 715 aa7.33□□□□□ -1.24
CLCN3-206ENST00000507875 CKBP12277 381 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms