RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 SLC38A8A6NNN8 435 aa17.94■□□□□ 0.46
SFXN1-208ENST00000507823 CNTN5O94779 1100 aa17.94■□□□□ 0.46
SFXN1-208ENST00000507823 TOP3BO95985 862 aaKnown RBP17.94■□□□□ 0.46
SFXN1-208ENST00000507823 MPOP05164 745 aa17.94■□□□□ 0.46
SFXN1-208ENST00000507823 RENBPP51606 427 aa17.94■□□□□ 0.46
SFXN1-208ENST00000507823 ARPP19P56211 112 aa17.94■□□□□ 0.46
SFXN1-208ENST00000507823 DUSP4Q13115 394 aa17.94■□□□□ 0.46
SFXN1-208ENST00000507823 CTC1Q2NKJ3 1217 aa17.94■□□□□ 0.46
SFXN1-208ENST00000507823 C10orf120Q5SQS8 335 aa17.94■□□□□ 0.46
SFXN1-208ENST00000507823 MBLAC2Q68D91 279 aa17.94■□□□□ 0.46
SFXN1-208ENST00000507823 IGSF8Q969P0 613 aa17.94■□□□□ 0.46
SFXN1-208ENST00000507823 SKA1Q96BD8 255 aa17.94■□□□□ 0.46
SFXN1-208ENST00000507823 HMCESQ96FZ2 354 aa17.94■□□□□ 0.46
SFXN1-208ENST00000507823 CDK5RAP1Q96SZ6 601 aaKnown RBP17.94■□□□□ 0.46
SFXN1-208ENST00000507823 SEPT5Q99719 369 aaPredicted RBP17.94■□□□□ 0.46
SFXN1-208ENST00000507823 FICDQ9BVA6 458 aa17.94■□□□□ 0.46
SFXN1-208ENST00000507823 C20orf96Q9NUD7 363 aaPredicted RBP17.94■□□□□ 0.46
SFXN1-208ENST00000507823 TRAFD1O14545 582 aaPredicted RBP17.94■□□□□ 0.46
SFXN1-208ENST00000507823 T-ENOLP0DO92 83 aa17.94■□□□□ 0.46
SFXN1-208ENST00000507823 NEFHP12036 1026 aa17.94■□□□□ 0.46
SFXN1-208ENST00000507823 MAPKAPK2P49137 400 aa17.94■□□□□ 0.46
SFXN1-208ENST00000507823 ARFIP2P53365 341 aa17.94■□□□□ 0.46
SFXN1-208ENST00000507823 TMPRSS15P98073 1019 aa17.94■□□□□ 0.46
SFXN1-208ENST00000507823 FBXO22Q8NEZ5 403 aa17.94■□□□□ 0.46
SFXN1-208ENST00000507823 OR6Y1Q8NGX8 325 aa17.94■□□□□ 0.46
SFXN1-208ENST00000507823 VPS45Q9NRW7 570 aa17.94■□□□□ 0.46
SFXN1-208ENST00000507823 TREX1Q9NSU2 369 aa17.94■□□□□ 0.46
SFXN1-208ENST00000507823 KCNK4Q9NYG8 393 aa17.94■□□□□ 0.46
SFXN1-208ENST00000507823 HSFX1Q9UBD0 423 aa17.94■□□□□ 0.46
SFXN1-208ENST00000507823 TCAF1Q9Y4C2 921 aa17.94■□□□□ 0.46
SFXN1-208ENST00000507823 NT5C1B-RDH14C9J2C7 533 aa17.93■□□□□ 0.46
SFXN1-208ENST00000507823 TYK2P29597 1187 aa17.93■□□□□ 0.46
SFXN1-208ENST00000507823 ARCN1P48444 511 aaKnown RBP17.93■□□□□ 0.46
SFXN1-208ENST00000507823 RIPK1Q13546 671 aa17.93■□□□□ 0.46
SFXN1-208ENST00000507823 IPMKQ8NFU5 416 aa17.93■□□□□ 0.46
SFXN1-208ENST00000507823 INPP5DQ92835 1189 aa17.93■□□□□ 0.46
SFXN1-208ENST00000507823 KLHL29Q96CT2 875 aa17.93■□□□□ 0.46
SFXN1-208ENST00000507823 SCLYQ96I15 445 aa17.93■□□□□ 0.46
SFXN1-208ENST00000507823 ZNF778Q96MU6 729 aa17.93■□□□□ 0.46
SFXN1-208ENST00000507823 TOX2Q96NM4 488 aa17.93■□□□□ 0.46
SFXN1-208ENST00000507823 GPR22Q99680 433 aa17.93■□□□□ 0.46
SFXN1-208ENST00000507823 LRMDAQ9H2I8 198 aa17.93■□□□□ 0.46
SFXN1-208ENST00000507823 HIPK3Q9H422 1215 aa17.93■□□□□ 0.46
SFXN1-208ENST00000507823 THAP1Q9NVV9 213 aa17.93■□□□□ 0.46
SFXN1-208ENST00000507823 NUMBLQ9Y6R0 609 aa17.93■□□□□ 0.46
SFXN1-208ENST00000507823 SLC12A8A0AV02 714 aa17.93■□□□□ 0.46
SFXN1-208ENST00000507823 PQBP1O60828 265 aaKnown RBP17.93■□□□□ 0.46
SFXN1-208ENST00000507823 FGF3P11487 239 aaPredicted RBP17.93■□□□□ 0.46
SFXN1-208ENST00000507823 DNAJB1P25685 340 aa17.93■□□□□ 0.46
SFXN1-208ENST00000507823 YBEYP58557 167 aaPredicted RBP17.93■□□□□ 0.46
SFXN1-208ENST00000507823 PCLAFQ15004 111 aa17.93■□□□□ 0.46
SFXN1-208ENST00000507823 PARP15Q460N3 678 aa17.93■□□□□ 0.46
SFXN1-208ENST00000507823 CCDC153Q494R4 210 aa17.93■□□□□ 0.46
SFXN1-208ENST00000507823 FASTKD1Q53R41 847 aaKnown RBP17.93■□□□□ 0.46
SFXN1-208ENST00000507823 CLNKQ7Z7G1 428 aa17.93■□□□□ 0.46
SFXN1-208ENST00000507823 RANBP9Q96S59 729 aa17.93■□□□□ 0.46
SFXN1-208ENST00000507823 VN1R3Q9BXE9 311 aa17.93■□□□□ 0.46
SFXN1-208ENST00000507823 TMEM120AQ9BXJ8 343 aa17.93■□□□□ 0.46
SFXN1-208ENST00000507823 CWH43Q9H720 699 aa17.93■□□□□ 0.46
SFXN1-208ENST00000507823 DCTN4Q9UJW0 460 aa17.93■□□□□ 0.46
SFXN1-208ENST00000507823 TLR5O60602 858 aa17.92■□□□□ 0.46
SFXN1-208ENST00000507823 ATP5BP06576 529 aaKnown RBP17.92■□□□□ 0.46
SFXN1-208ENST00000507823 PBX3P40426 434 aa17.92■□□□□ 0.46
SFXN1-208ENST00000507823 POLD2P49005 469 aa17.92■□□□□ 0.46
SFXN1-208ENST00000507823 IL10RBQ08334 325 aa17.92■□□□□ 0.46
SFXN1-208ENST00000507823 USP41Q3LFD5 358 aa17.92■□□□□ 0.46
SFXN1-208ENST00000507823 NADSYN1Q6IA69 706 aa17.92■□□□□ 0.46
SFXN1-208ENST00000507823 KLHDC10Q6PID8 442 aa17.92■□□□□ 0.46
SFXN1-208ENST00000507823 PRSS55Q6UWB4 352 aaPredicted RBP17.92■□□□□ 0.46
SFXN1-208ENST00000507823 DEFB118Q96PH6 123 aa17.92■□□□□ 0.46
SFXN1-208ENST00000507823 TMEM237Q96Q45 408 aa17.92■□□□□ 0.46
SFXN1-208ENST00000507823 RHOJQ9H4E5 214 aa17.92■□□□□ 0.46
SFXN1-208ENST00000507823 CDY1Q9Y6F8 540 aa17.92■□□□□ 0.46
SFXN1-208ENST00000507823 HNRNPCL1O60812 293 aaKnown RBP17.92■□□□□ 0.46
SFXN1-208ENST00000507823 ARNTP27540 789 aa17.92■□□□□ 0.46
SFXN1-208ENST00000507823 KCNJ2P63252 427 aa17.92■□□□□ 0.46
SFXN1-208ENST00000507823 MSLNQ13421 630 aaPredicted RBP17.92■□□□□ 0.46
SFXN1-208ENST00000507823 HSF5Q4G112 596 aaPredicted RBP17.92■□□□□ 0.46
SFXN1-208ENST00000507823 PPM1JQ5JR12 505 aa17.92■□□□□ 0.46
SFXN1-208ENST00000507823 C1orf53Q5VUE5 145 aa17.92■□□□□ 0.46
SFXN1-208ENST00000507823 RAP1GAP2Q684P5 730 aa17.92■□□□□ 0.46
SFXN1-208ENST00000507823 C16orf46Q6P387 395 aa17.92■□□□□ 0.46
SFXN1-208ENST00000507823 TFAP2DQ7Z6R9 452 aa17.92■□□□□ 0.46
SFXN1-208ENST00000507823 LCA5Q86VQ0 697 aa17.92■□□□□ 0.46
SFXN1-208ENST00000507823 ZC3HC1Q86WB0 502 aaKnown RBP17.92■□□□□ 0.46
SFXN1-208ENST00000507823 PPHLN1Q8NEY8 458 aaKnown RBP17.92■□□□□ 0.46
SFXN1-208ENST00000507823 VPS39Q96JC1 886 aa17.92■□□□□ 0.46
SFXN1-208ENST00000507823 SIKE1Q9BRV8 207 aa17.92■□□□□ 0.46
SFXN1-208ENST00000507823 PRKD2Q9BZL6 878 aa17.92■□□□□ 0.46
SFXN1-208ENST00000507823 CCSER2Q9H7U1 834 aa17.92■□□□□ 0.46
SFXN1-208ENST00000507823 IARS2Q9NSE4 1012 aaKnown RBP17.92■□□□□ 0.46
SFXN1-208ENST00000507823 TMEM216Q9P0N5 145 aa17.92■□□□□ 0.46
SFXN1-208ENST00000507823 ZFP69BQ9UJL9 534 aa17.92■□□□□ 0.46
SFXN1-208ENST00000507823 J3KR12 359 aa17.91■□□□□ 0.46
SFXN1-208ENST00000507823 ADAM12O43184 909 aa17.91■□□□□ 0.46
SFXN1-208ENST00000507823 MMP2P08253 660 aa17.91■□□□□ 0.46
SFXN1-208ENST00000507823 TUFMP49411 452 aaKnown RBP17.91■□□□□ 0.46
SFXN1-208ENST00000507823 MNX1P50219 401 aaPredicted RBP17.91■□□□□ 0.46
SFXN1-208ENST00000507823 WNT3AP56704 352 aa17.91■□□□□ 0.46
SFXN1-208ENST00000507823 STX3Q13277 289 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms