RNA–Protein interactions for RNA: ENST00000507316.1

TUSC3-205, Transcript of tumor suppressor candidate 3, human

TSL 3

Gene TUSC3, Length 573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUSC3-205	ENST00000507316	CTAGE3P	Q8IX95	158 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	COLGALT2	Q8IYK4	626 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	LRRC34	Q8IZ02	419 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	OXR1	Q8N573	874 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	ZFP28	Q8NHY6	868 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	IFI44	Q8TCB0	444 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	HM13	Q8TCT9	377 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	FAM172A	Q8WUF8	416 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	SLC44A1	Q8WWI5	657 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	TRIB2	Q92519	343 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	NELL1	Q92832	810 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	RAD51AP1	Q96B01	352 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	CHFR	Q96EP1	664 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	MAGEB18	Q96M61	343 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	TTC25	Q96NG3	672 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	SLC29A1	Q99808	456 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	TMEM79	Q9BSE2	394 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	BTBD10	Q9BSF8	475 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	LRRC1	Q9BTT6	524 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	EFHD1	Q9BUP0	239 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	LSM14B	Q9BX40	385 aa	Known RBP	5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	ASPN	Q9BXN1	380 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	NYX	Q9GZU5	481 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	HOXD1	Q9GZZ0	328 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	PAIP1	Q9H074	479 aa	Known RBP	5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	NAPB	Q9H115	298 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	SLITRK6	Q9H5Y7	841 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	SP110	Q9HB58	689 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	KIAA1586	Q9HCI6	787 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	MRPL40	Q9NQ50	206 aa	Known RBP	5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	ANLN	Q9NQW6	1124 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	MAN1C1	Q9NR34	630 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	KLHL1	Q9NR64	748 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	OLFML3	Q9NRN5	406 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	SLC38A7	Q9NVC3	462 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	INTS7	Q9NVH2	962 aa	Known RBP	5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	DDX18	Q9NVP1	670 aa	Known RBP	5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	GDAP2	Q9NXN4	497 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	GPRC5D	Q9NZD1	345 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	DERA	Q9Y315	318 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	CHTOP	Q9Y3Y2	248 aa	Known RBP	5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	MTF2	Q9Y483	593 aa	Predicted RBP	5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	AFG3L2	Q9Y4W6	797 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	ASB4	Q9Y574	426 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	TRPV2	Q9Y5S1	764 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	MYH6	P13533	1939 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	PTPRU	Q92729	1446 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	ERVK-7	P63135	1459 aa		5.2	□□□□□ -1.58
TUSC3-205	ENST00000507316	ADCY10	Q96PN6	1610 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	LOC390937	A0A1W2PQ73	354 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316		A0A1W2PQC6	194 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	SSU72P8	A0A1W2PR75	194 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	ESYT2	A0FGR8	921 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	ACOD1	A6NK06	481 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	ATP6V1G2-DDX39B	F2Z307	99 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	ELL2	O00472	640 aa	Predicted RBP	5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	TXNDC9	O14530	226 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	PER2	O15055	1255 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	KIAA0355	O15063	1070 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	MAGEB2	O15479	319 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	RGS16	O15492	202 aa	Predicted RBP	5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	SLC7A4	O43246	635 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	SNAP91	O60641	907 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	TOM1	O60784	492 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	OR7A10	O76100	309 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	CSPG5	O95196	566 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	APOL3	O95236	402 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	ZBTB11	O95625	1053 aa	Predicted RBP	5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	FUCA1	P04066	466 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	ANXA6	P08133	673 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	SPATA31D3	P0C874	917 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	TRAPPC2	P0DI81	140 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	TRAPPC2B	P0DI82	140 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	CCDC130	P13994	396 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	PTPN1	P18031	435 aa	Known RBP	5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	SERPINB1	P30740	379 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	SLC5A2	P31639	672 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	PBX1	P40424	430 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	OR3A3	P47888	321 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	NPTX2	P47972	431 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	GIPR	P48546	466 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	CEBPA	P49715	358 aa	Predicted RBP	5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	EIF6	P56537	245 aa	Known RBP	5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	PEX3	P56589	373 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	RNASE9	P60153	205 aa	Known RBP	5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	FLI1	Q01543	452 aa	Predicted RBP	5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	CDC16	Q13042	620 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	APOF	Q13790	326 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	SPA17	Q15506	151 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	PFKFB3	Q16875	520 aa	Predicted RBP	5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	GRAMD1B	Q3KR37	738 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	NADK2	Q4G0N4	442 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	SEZ6	Q53EL9	994 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	ARSH	Q5FYA8	562 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	PITRM1	Q5JRX3	1037 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	ODR4	Q5SWX8	454 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	HES5	Q5TA89	166 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	NT5DC1	Q5TFE4	455 aa		5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	CCDC137	Q6PK04	289 aa	Known RBP	5.19	□□□□□ -1.58
TUSC3-205	ENST00000507316	UGT2A3	Q6UWM9	527 aa		5.19	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms