RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 ZSCAN5DPP0CG00 497 aa14.44□□□□□ -0.1
RNF4-208ENST00000507247 CHRM1P11229 460 aaPredicted RBP14.44□□□□□ -0.1
RNF4-208ENST00000507247 SRCP12931 536 aa14.44□□□□□ -0.1
RNF4-208ENST00000507247 CD72P21854 359 aa14.44□□□□□ -0.1
RNF4-208ENST00000507247 STIP1P31948 543 aaKnown RBP14.44□□□□□ -0.1
RNF4-208ENST00000507247 HNRNPDQ14103 355 aaKnown RBP14.44□□□□□ -0.1
RNF4-208ENST00000507247 EIF4HQ15056 248 aaKnown RBP14.44□□□□□ -0.1
RNF4-208ENST00000507247 PREPLQ4J6C6 727 aaPredicted RBP14.44□□□□□ -0.1
RNF4-208ENST00000507247 TEX44Q53QW1 395 aa14.44□□□□□ -0.1
RNF4-208ENST00000507247 EMC10Q5UCC4 262 aa14.44□□□□□ -0.1
RNF4-208ENST00000507247 RETSATQ6NUM9 610 aa14.44□□□□□ -0.1
RNF4-208ENST00000507247 PGBD5Q8N414 524 aa14.44□□□□□ -0.1
RNF4-208ENST00000507247 SH2D3CQ8N5H7 860 aa14.44□□□□□ -0.1
RNF4-208ENST00000507247 CCDC110Q8TBZ0 833 aa14.44□□□□□ -0.1
RNF4-208ENST00000507247 GRK7Q8WTQ7 553 aa14.44□□□□□ -0.1
RNF4-208ENST00000507247 FAM3CQ92520 227 aa14.44□□□□□ -0.1
RNF4-208ENST00000507247 MSANTD3Q96H12 275 aa14.44□□□□□ -0.1
RNF4-208ENST00000507247 TRIM51Q9BSJ1 452 aa14.44□□□□□ -0.1
RNF4-208ENST00000507247 ARHGEF3Q9NR81 526 aa14.44□□□□□ -0.1
RNF4-208ENST00000507247 LHX3Q9UBR4 397 aa14.44□□□□□ -0.1
RNF4-208ENST00000507247 SLCO3A1Q9UIG8 710 aa14.44□□□□□ -0.1
RNF4-208ENST00000507247 SLC25A13Q9UJS0 675 aa14.44□□□□□ -0.1
RNF4-208ENST00000507247 HS3ST2Q9Y278 367 aa14.44□□□□□ -0.1
RNF4-208ENST00000507247 FCF1Q9Y324 198 aaKnown RBP14.44□□□□□ -0.1
RNF4-208ENST00000507247 C5orf60A6NFR6 353 aa14.43□□□□□ -0.1
RNF4-208ENST00000507247 RIOK3O14730 519 aaKnown RBP14.43□□□□□ -0.1
RNF4-208ENST00000507247 ZNF821O75541 412 aaPredicted RBP14.43□□□□□ -0.1
RNF4-208ENST00000507247 ECEL1O95672 775 aa14.43□□□□□ -0.1
RNF4-208ENST00000507247 ATP5BP06576 529 aaKnown RBP14.43□□□□□ -0.1
RNF4-208ENST00000507247 CD68P34810 354 aaPredicted RBP14.43□□□□□ -0.1
RNF4-208ENST00000507247 MMP13P45452 471 aa14.43□□□□□ -0.1
RNF4-208ENST00000507247 RGRP47804 291 aa14.43□□□□□ -0.1
RNF4-208ENST00000507247 GEMIN4P57678 1058 aaKnown RBP14.43□□□□□ -0.1
RNF4-208ENST00000507247 DR1Q01658 176 aa14.43□□□□□ -0.1
RNF4-208ENST00000507247 LMNB2Q03252 620 aa14.43□□□□□ -0.1
RNF4-208ENST00000507247 SLC20A2Q08357 652 aa14.43□□□□□ -0.1
RNF4-208ENST00000507247 RFTN1Q14699 578 aaPredicted RBP14.43□□□□□ -0.1
RNF4-208ENST00000507247 TRIP13Q15645 432 aaPredicted RBP14.43□□□□□ -0.1
RNF4-208ENST00000507247 INO80DQ53TQ3 878 aaPredicted RBP14.43□□□□□ -0.1
RNF4-208ENST00000507247 ANKRD20A2Q5SQ80 823 aa14.43□□□□□ -0.1
RNF4-208ENST00000507247 ANKRD20A1Q5TYW2 823 aa14.43□□□□□ -0.1
RNF4-208ENST00000507247 MARC1Q5VT66 337 aa14.43□□□□□ -0.1
RNF4-208ENST00000507247 ANKRD20A3Q5VUR7 823 aa14.43□□□□□ -0.1
RNF4-208ENST00000507247 EGFLAMQ63HQ2 1017 aa14.43□□□□□ -0.1
RNF4-208ENST00000507247 GSTA5Q7RTV2 222 aa14.43□□□□□ -0.1
RNF4-208ENST00000507247 JAMLQ86YT9 394 aa14.43□□□□□ -0.1
RNF4-208ENST00000507247 ATP11CQ8NB49 1132 aa14.43□□□□□ -0.1
RNF4-208ENST00000507247 TSEN2Q8NCE0 465 aaKnown RBP14.43□□□□□ -0.1
RNF4-208ENST00000507247 NSMCE1Q8WV22 266 aa14.43□□□□□ -0.1
RNF4-208ENST00000507247 SPATA13Q96N96 652 aa14.43□□□□□ -0.1
RNF4-208ENST00000507247 RUNDC3BQ96NL0 473 aa14.43□□□□□ -0.1
RNF4-208ENST00000507247 AGAP3Q96P47 875 aa14.43□□□□□ -0.1
RNF4-208ENST00000507247 NT5MQ9NPB1 228 aa14.43□□□□□ -0.1
RNF4-208ENST00000507247 ZDHHC4Q9NPG8 344 aa14.43□□□□□ -0.1
RNF4-208ENST00000507247 RBM22Q9NW64 420 aaKnown RBP eCLIP14.43□□□□□ -0.11e-9■■■■■ 27.3
RNF4-208ENST00000507247 KLHL8Q9P2G9 620 aaPredicted RBP14.43□□□□□ -0.1
RNF4-208ENST00000507247 WNT16Q9UBV4 365 aa14.43□□□□□ -0.1
RNF4-208ENST00000507247 ATP8A1Q9Y2Q0 1164 aa14.43□□□□□ -0.1
RNF4-208ENST00000507247 BDP1A6H8Y1 2624 aa14.43□□□□□ -0.1
RNF4-208ENST00000507247 F5P12259 2224 aa14.42□□□□□ -0.1
RNF4-208ENST00000507247 ZBTB24O43167 697 aaPredicted RBP14.42□□□□□ -0.1
RNF4-208ENST00000507247 TIMM44O43615 452 aa14.42□□□□□ -0.1
RNF4-208ENST00000507247 GCATO75600 419 aa14.42□□□□□ -0.1
RNF4-208ENST00000507247 GJB3O75712 270 aa14.42□□□□□ -0.1
RNF4-208ENST00000507247 SLU7O95391 586 aaKnown RBP14.42□□□□□ -0.1
RNF4-208ENST00000507247 KRT14P02533 472 aa14.42□□□□□ -0.1
RNF4-208ENST00000507247 SRPRAP08240 638 aaKnown RBP14.42□□□□□ -0.1
RNF4-208ENST00000507247 RPL22P35268 128 aaKnown RBP14.42□□□□□ -0.1
RNF4-208ENST00000507247 TNFRSF4P43489 277 aa14.42□□□□□ -0.1
RNF4-208ENST00000507247 KIR2DL1P43626 348 aaPredicted RBP14.42□□□□□ -0.1
RNF4-208ENST00000507247 VASPP50552 380 aaPredicted RBP14.42□□□□□ -0.1
RNF4-208ENST00000507247 RENBPP51606 427 aa14.42□□□□□ -0.1
RNF4-208ENST00000507247 SEC13P55735 322 aa14.42□□□□□ -0.1
RNF4-208ENST00000507247 MAXP61244 160 aa14.42□□□□□ -0.1
RNF4-208ENST00000507247 PRKCQQ04759 706 aa14.42□□□□□ -0.1
RNF4-208ENST00000507247 PTK6Q13882 451 aa14.42□□□□□ -0.1
RNF4-208ENST00000507247 DHX34Q14147 1143 aaKnown RBP14.42□□□□□ -0.1
RNF4-208ENST00000507247 ZNF234Q14588 700 aa14.42□□□□□ -0.1
RNF4-208ENST00000507247 ZNF235Q14590 738 aa14.42□□□□□ -0.1
RNF4-208ENST00000507247 P3H1Q32P28 736 aa14.42□□□□□ -0.1
RNF4-208ENST00000507247 C22orf39Q6P5X5 142 aa14.42□□□□□ -0.1
RNF4-208ENST00000507247 PID1Q7Z2X4 250 aa14.42□□□□□ -0.1
RNF4-208ENST00000507247 UBALD2Q8IYN6 164 aa14.42□□□□□ -0.1
RNF4-208ENST00000507247 ZNF366Q8N895 744 aa14.42□□□□□ -0.1
RNF4-208ENST00000507247 CCDC89Q8N998 374 aa14.42□□□□□ -0.1
RNF4-208ENST00000507247 CASKIN2Q8WXE0 1202 aa14.42□□□□□ -0.1
RNF4-208ENST00000507247 EXOC2Q96KP1 924 aa14.42□□□□□ -0.1
RNF4-208ENST00000507247 TEKT5Q96M29 485 aa14.42□□□□□ -0.1
RNF4-208ENST00000507247 ACOX2Q99424 681 aa14.42□□□□□ -0.1
RNF4-208ENST00000507247 VAT1Q99536 393 aa14.42□□□□□ -0.1
RNF4-208ENST00000507247 LRRC1Q9BTT6 524 aa14.42□□□□□ -0.1
RNF4-208ENST00000507247 CINPQ9BW66 212 aaPredicted RBP14.42□□□□□ -0.1
RNF4-208ENST00000507247 PCDH9Q9HC56 1237 aa14.42□□□□□ -0.1
RNF4-208ENST00000507247 THAP10Q9P2Z0 257 aaPredicted RBP14.42□□□□□ -0.1
RNF4-208ENST00000507247 SEPT3Q9UH03 358 aa14.42□□□□□ -0.1
RNF4-208ENST00000507247 FBXL21Q9UKT6 434 aa14.42□□□□□ -0.1
RNF4-208ENST00000507247 NDRG2Q9UN36 371 aaKnown RBP14.42□□□□□ -0.1
RNF4-208ENST00000507247 STARD13Q9Y3M8 1113 aa14.42□□□□□ -0.1
RNF4-208ENST00000507247 CKAP5Q14008 2032 aa14.42□□□□□ -0.1
RNF4-208ENST00000507247 NCOR1O75376 2440 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms