RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 PDGFRAP16234 1089 aa16.13■□□□□ 0.17
SCLT1-208ENST00000506368 ADORA2AP29274 412 aa16.13■□□□□ 0.17
SCLT1-208ENST00000506368 EIF2B2P49770 351 aaKnown RBP16.13■□□□□ 0.17
SCLT1-208ENST00000506368 BMXP51813 675 aa16.13■□□□□ 0.17
SCLT1-208ENST00000506368 SOX10P56693 466 aa16.13■□□□□ 0.17
SCLT1-208ENST00000506368 FSTL1Q12841 308 aa16.13■□□□□ 0.17
SCLT1-208ENST00000506368 MERTKQ12866 999 aa16.13■□□□□ 0.17
SCLT1-208ENST00000506368 DCAF6Q58WW2 860 aa16.13■□□□□ 0.17
SCLT1-208ENST00000506368 SNRNP48Q6IEG0 339 aaKnown RBP16.13■□□□□ 0.17
SCLT1-208ENST00000506368 FAM45BPQ6NSW5 357 aa16.13■□□□□ 0.17
SCLT1-208ENST00000506368 ABRAXAS1Q6UWZ7 409 aa16.13■□□□□ 0.17
SCLT1-208ENST00000506368 CHSY3Q70JA7 882 aa16.13■□□□□ 0.17
SCLT1-208ENST00000506368 DCLK2Q8N568 766 aa16.13■□□□□ 0.17
SCLT1-208ENST00000506368 ANKRD52Q8NB46 1076 aa16.13■□□□□ 0.17
SCLT1-208ENST00000506368 FAM45AQ8TCE6 357 aa16.13■□□□□ 0.17
SCLT1-208ENST00000506368 NRBF2Q96F24 287 aa16.13■□□□□ 0.17
SCLT1-208ENST00000506368 CCDC97Q96F63 343 aaPredicted RBP16.13■□□□□ 0.17
SCLT1-208ENST00000506368 CDHR1Q96JP9 859 aa16.13■□□□□ 0.17
SCLT1-208ENST00000506368 SPATA13Q96N96 652 aa16.13■□□□□ 0.17
SCLT1-208ENST00000506368 SLC29A1Q99808 456 aa16.13■□□□□ 0.17
SCLT1-208ENST00000506368 BCO2Q9BYV7 579 aa16.13■□□□□ 0.17
SCLT1-208ENST00000506368 SEMA6AQ9H2E6 1030 aa16.13■□□□□ 0.17
SCLT1-208ENST00000506368 WDR55Q9H6Y2 383 aaPredicted RBP16.13■□□□□ 0.17
SCLT1-208ENST00000506368 CNOT6Q9ULM6 557 aaKnown RBP16.13■□□□□ 0.17
SCLT1-208ENST00000506368 TANC1Q9C0D5 1861 aa16.13■□□□□ 0.17
SCLT1-208ENST00000506368 A0A096LPK6 155 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 AQP12BA6NM10 295 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 CPNE6O95741 557 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 GSTT2P0CG29 244 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 GSTT2BP0CG30 244 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 GABRB3P28472 473 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 GNL1P36915 607 aaPredicted RBP16.12■□□□□ 0.17
SCLT1-208ENST00000506368 PRKCQQ04759 706 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 RAB39AQ14964 217 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 SLC36A3Q495N2 470 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 SPATS1Q496A3 300 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 PPM1JQ5JR12 505 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 AARS2Q5JTZ9 985 aaKnown RBP16.12■□□□□ 0.17
SCLT1-208ENST00000506368 EGFLAMQ63HQ2 1017 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 SCARA3Q6AZY7 606 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 AQP12AQ8IXF9 295 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 RAB2BQ8WUD1 216 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 RXFP2Q8WXD0 754 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 ARNTL2Q8WYA1 636 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 SLCO4A1Q96BD0 722 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 SLC45A3Q96JT2 553 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 ZNF641Q96N77 438 aaPredicted RBP16.12■□□□□ 0.17
SCLT1-208ENST00000506368 CIB1Q99828 191 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 TARS2Q9BW92 718 aaKnown RBP16.12■□□□□ 0.17
SCLT1-208ENST00000506368 NSMCE4AQ9NXX6 385 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 FBXO40Q9UH90 709 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 GTF2IRD1Q9UHL9 959 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 GIT1Q9Y2X7 761 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 COPG1Q9Y678 874 aaKnown RBP16.12■□□□□ 0.17
SCLT1-208ENST00000506368 TNNC2P02585 160 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 TFPTP0C1Z6 253 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 FCGR1AP12314 374 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 JUNBP17275 347 aaPredicted RBP16.12■□□□□ 0.17
SCLT1-208ENST00000506368 ARL2P36404 184 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 CAP2P40123 477 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 CDH15P55291 814 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 CTBSQ01459 385 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 PRKCEQ02156 737 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 NFATC3Q12968 1075 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 SQLEQ14534 574 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 CLPPQ16740 277 aaPredicted RBP16.12■□□□□ 0.17
SCLT1-208ENST00000506368 TRIM16LQ309B1 348 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 CST9Q5W186 159 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 THOC7Q6I9Y2 204 aaKnown RBP16.12■□□□□ 0.17
SCLT1-208ENST00000506368 NEK10Q6ZWH5 1172 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 TRMT1LQ7Z2T5 733 aaKnown RBP16.12■□□□□ 0.17
SCLT1-208ENST00000506368 TTC30BQ8N4P2 665 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 AFAP1L2Q8N4X5 818 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 RNF148Q8N7C7 305 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 GRIN3AQ8TCU5 1115 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 STARD8Q92502 1023 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 LPGAT1Q92604 370 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 PPWD1Q96BP3 646 aaKnown RBP16.12■□□□□ 0.17
SCLT1-208ENST00000506368 ZBTB45Q96K62 511 aaPredicted RBP16.12■□□□□ 0.17
SCLT1-208ENST00000506368 HEPHQ9BQS7 1158 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 MROQ9BYG7 248 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 MTMR12Q9C0I1 747 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 GPN2Q9H9Y4 310 aaPredicted RBP16.12■□□□□ 0.17
SCLT1-208ENST00000506368 PXMP2Q9NR77 195 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 NCKIPSDQ9NZQ3 722 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 TJP2Q9UDY2 1190 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 CD300AQ9UGN4 299 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 CROTQ9UKG9 612 aa16.12■□□□□ 0.17
SCLT1-208ENST00000506368 TRPM7Q96QT4 1865 aa16.11■□□□□ 0.17
SCLT1-208ENST00000506368 A0A1W2PPW3 197 aa16.11■□□□□ 0.17
SCLT1-208ENST00000506368 NEMP1O14524 444 aa16.11■□□□□ 0.17
SCLT1-208ENST00000506368 XPOTO43592 962 aaKnown RBP16.11■□□□□ 0.17
SCLT1-208ENST00000506368 PIGNO95427 931 aa16.11■□□□□ 0.17
SCLT1-208ENST00000506368 BCL10O95999 233 aa16.11■□□□□ 0.17
SCLT1-208ENST00000506368 VDRP11473 427 aa16.11■□□□□ 0.17
SCLT1-208ENST00000506368 PTPN2P17706 415 aa16.11■□□□□ 0.17
SCLT1-208ENST00000506368 MPSTP25325 297 aa16.11■□□□□ 0.17
SCLT1-208ENST00000506368 MSX2P35548 267 aaPredicted RBP16.11■□□□□ 0.17
SCLT1-208ENST00000506368 PTPN11Q06124 597 aaPredicted RBP16.11■□□□□ 0.17
SCLT1-208ENST00000506368 SNX17Q15036 470 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms