RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 TNFSF8P32971 234 aa4.34□□□□□ -1.71
TOPBP1-204ENST00000505804 DPP6P42658 865 aa4.34□□□□□ -1.71
TOPBP1-204ENST00000505804 NR4A2P43354 598 aa4.34□□□□□ -1.71
TOPBP1-204ENST00000505804 TMPRSS3P57727 454 aa4.34□□□□□ -1.71
TOPBP1-204ENST00000505804 GALNT2Q10471 571 aa4.34□□□□□ -1.71
TOPBP1-204ENST00000505804 SLC22A25Q6T423 547 aa4.34□□□□□ -1.71
TOPBP1-204ENST00000505804 FAM185AQ8N0U4 392 aa4.34□□□□□ -1.71
TOPBP1-204ENST00000505804 MMP21Q8N119 569 aa4.34□□□□□ -1.71
TOPBP1-204ENST00000505804 DNAAF1Q8NEP3 725 aa4.34□□□□□ -1.71
TOPBP1-204ENST00000505804 MPLKIPQ8TAP9 179 aa4.34□□□□□ -1.71
TOPBP1-204ENST00000505804 RAB40AQ8WXH6 277 aa4.34□□□□□ -1.71
TOPBP1-204ENST00000505804 ELP4Q96EB1 424 aa4.34□□□□□ -1.71
TOPBP1-204ENST00000505804 APOPT1Q96IL0 206 aa4.34□□□□□ -1.71
TOPBP1-204ENST00000505804 EYA3Q99504 573 aa4.34□□□□□ -1.71
TOPBP1-204ENST00000505804 C1QTNF7Q9BXJ2 289 aa4.34□□□□□ -1.71
TOPBP1-204ENST00000505804 EPHX3Q9H6B9 360 aa4.34□□□□□ -1.71
TOPBP1-204ENST00000505804 MAP6D1Q9H9H5 199 aa4.34□□□□□ -1.71
TOPBP1-204ENST00000505804 ATP8A2Q9NTI2 1148 aa4.34□□□□□ -1.71
TOPBP1-204ENST00000505804 GRHL1Q9NZI5 618 aa4.34□□□□□ -1.71
TOPBP1-204ENST00000505804 TBX20Q9UMR3 447 aa4.34□□□□□ -1.71
TOPBP1-204ENST00000505804 CNPY2Q9Y2B0 182 aa4.34□□□□□ -1.71
TOPBP1-204ENST00000505804 ZNF521Q96K83 1311 aa4.34□□□□□ -1.71
TOPBP1-204ENST00000505804 A6NLC8 198 aa4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 FAM157AC9JC47 383 aa4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 SOCS2O14508 198 aa4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 CEP104O60308 925 aa4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 GUCY1B2O75343 617 aa4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 ADAP00813 363 aa4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 SERPINC1P01008 464 aa4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 FGF2P09038 288 aa4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 LIFRP42702 1097 aa4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 ALDH7A1P49419 539 aaKnown RBP4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 PLCD1P51178 756 aa4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 CLCNKBP51801 687 aa4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 CDH15P55291 814 aa4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 RPP30P78346 268 aaKnown RBP4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 SRSF1Q07955 248 aaKnown RBP eCLIP4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 G3BP1Q13283 466 aaKnown RBP eCLIP4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 GPR68Q15743 365 aa4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 RPE65Q16518 533 aa4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 TBC1D9BQ66K14 1250 aa4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 CCDC70Q6NSX1 233 aa4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 C1QL2Q7Z5L3 287 aa4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 IRF2BP2Q7Z5L9 587 aa4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 MON1AQ86VX9 555 aa4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 HORMAD2Q8N7B1 307 aa4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 PAF1Q8N7H5 531 aa4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 KDM1BQ8NB78 822 aa4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 ST8SIA4Q92187 359 aa4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 SLC25A28Q96A46 364 aa4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 RRP36Q96EU6 259 aaKnown RBP4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 B3GNT4Q9C0J1 378 aa4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 PAIP1Q9H074 479 aaKnown RBP4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 INTS2Q9H0H0 1204 aaKnown RBP4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 FZD3Q9NPG1 666 aa4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 RNF146Q9NTX7 359 aa4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 POT1Q9NUX5 634 aa4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 TBC1D14Q9P2M4 693 aa4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 CLDN16Q9Y5I7 305 aa4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 SLC4A4Q9Y6R1 1079 aa4.33□□□□□ -1.72
TOPBP1-204ENST00000505804 IGLV5-39A0A0G2JS06 123 aa4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 CCDC196A0A1B0GTZ2 297 aa4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 TEX22C9J3V5 150 aa4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 STMND1H3BQB6 276 aa4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 HSPB6O14558 160 aa4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 RNMTO43148 476 aaKnown RBP4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 URODP06132 367 aa4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 UNGP13051 313 aaPredicted RBP4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 TNFRSF1BP20333 461 aa4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 RFC1P35251 1148 aaPredicted RBP4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 GGT5P36269 586 aa4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 NR1H2P55055 460 aa4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 CAMK1Q14012 370 aa4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 BAK1Q16611 211 aa4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 ME3Q16798 604 aa4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 ZNF766Q5HY98 468 aa4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 WASHC2DQ5SRD0 308 aa4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 INTS11Q5TA45 600 aaKnown RBP4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 JAKMIP3Q5VZ66 844 aa4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 TMEM71Q6P5X7 295 aa4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 IL20RBQ6UXL0 311 aa4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 COLCA1Q6ZS62 124 aa4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 SLC16A12Q6ZSM3 486 aa4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 PRSS45Q7RTY3 260 aa4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 CPXM2Q8N436 756 aa4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 TMEM199Q8N511 208 aa4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 ZNF366Q8N895 744 aa4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 RASSF8Q8NHQ8 419 aa4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 SMG7Q92540 1137 aaKnown RBP4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 INPP5DQ92835 1189 aa4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 ATOH1Q92858 354 aaPredicted RBP4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 RNF125Q96EQ8 232 aa4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 SEC62Q99442 399 aaKnown RBP4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 WDR77Q9BQA1 342 aaPredicted RBP4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 FUZQ9BT04 418 aa4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 POLDIP3Q9BY77 421 aaKnown RBP4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 TASP1Q9H6P5 420 aa4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 UBN1Q9NPG3 1134 aa4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 ENTPD7Q9NQZ7 604 aa4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 ZBTB40Q9NUA8 1239 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms