RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 CRTC2Q53ET0 693 aaPredicted RBP6.18□□□□□ -1.42
GYPB-204ENST00000504951 MS4A13Q5J8X5 152 aa6.18□□□□□ -1.42
GYPB-204ENST00000504951 PITRM1Q5JRX3 1037 aa6.18□□□□□ -1.42
GYPB-204ENST00000504951 MANEAQ5SRI9 462 aa6.18□□□□□ -1.42
GYPB-204ENST00000504951 PPP1R26Q5T8A7 1209 aaPredicted RBP6.18□□□□□ -1.42
GYPB-204ENST00000504951 PIP5KL1Q5T9C9 394 aa6.18□□□□□ -1.42
GYPB-204ENST00000504951 BORAQ6PGQ7 559 aa6.18□□□□□ -1.42
GYPB-204ENST00000504951 KYAT3Q6YP21 454 aaKnown RBP6.18□□□□□ -1.42
GYPB-204ENST00000504951 SV2AQ7L0J3 742 aa6.18□□□□□ -1.42
GYPB-204ENST00000504951 RAB11FIP2Q7L804 512 aa6.18□□□□□ -1.42
GYPB-204ENST00000504951 EFL1Q7Z2Z2 1120 aaKnown RBP6.18□□□□□ -1.42
GYPB-204ENST00000504951 CCDC117Q8IWD4 279 aaPredicted RBP6.18□□□□□ -1.42
GYPB-204ENST00000504951 SLC22A18ASQ8N1D0 253 aa6.18□□□□□ -1.42
GYPB-204ENST00000504951 FBXO39Q8N4B4 442 aa6.18□□□□□ -1.42
GYPB-204ENST00000504951 ZNF548Q8NEK5 533 aaPredicted RBP6.18□□□□□ -1.42
GYPB-204ENST00000504951 TMIEQ8NEW7 156 aa6.18□□□□□ -1.42
GYPB-204ENST00000504951 OR13H1Q8NG92 308 aa6.18□□□□□ -1.42
GYPB-204ENST00000504951 GPBAR1Q8TDU6 330 aa6.18□□□□□ -1.42
GYPB-204ENST00000504951 RNF139Q8WU17 664 aa6.18□□□□□ -1.42
GYPB-204ENST00000504951 OR8D1Q8WZ84 308 aa6.18□□□□□ -1.42
GYPB-204ENST00000504951 IRGQQ8WZA9 623 aa6.18□□□□□ -1.42
GYPB-204ENST00000504951 ERCC4Q92889 916 aaPredicted RBP6.18□□□□□ -1.42
GYPB-204ENST00000504951 BMFQ96LC9 184 aa6.18□□□□□ -1.42
GYPB-204ENST00000504951 TMEM74Q96NL1 305 aa6.18□□□□□ -1.42
GYPB-204ENST00000504951 HDAC8Q9BY41 377 aa6.18□□□□□ -1.42
GYPB-204ENST00000504951 STRADBQ9C0K7 418 aa6.18□□□□□ -1.42
GYPB-204ENST00000504951 CDH19Q9H159 772 aa6.18□□□□□ -1.42
GYPB-204ENST00000504951 OSBPL2Q9H1P3 480 aa6.18□□□□□ -1.42
GYPB-204ENST00000504951 KCTD10Q9H3F6 313 aa6.18□□□□□ -1.42
GYPB-204ENST00000504951 APOBEC3GQ9HC16 384 aaKnown RBP6.18□□□□□ -1.42
GYPB-204ENST00000504951 CNGB3Q9NQW8 809 aa6.18□□□□□ -1.42
GYPB-204ENST00000504951 PLEKHB1Q9UF11 243 aaPredicted RBP6.18□□□□□ -1.42
GYPB-204ENST00000504951 SERTAD1Q9UHV2 236 aa6.18□□□□□ -1.42
GYPB-204ENST00000504951 PCDHA7Q9UN72 937 aa6.18□□□□□ -1.42
GYPB-204ENST00000504951 CACNA1DQ01668 2161 aa6.18□□□□□ -1.42
GYPB-204ENST00000504951 PVALEFA0A1B0GWK0 134 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 A6NNZ2 444 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 C1QTNF3-AMACRE9PGA6 284 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 K7ELQ4 463 aaPredicted RBP6.17□□□□□ -1.42
GYPB-204ENST00000504951 XPO1O14980 1071 aaKnown RBP6.17□□□□□ -1.42
GYPB-204ENST00000504951 FFAR2O15552 330 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 AQP9O43315 295 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 AP1G1O43747 822 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 RTN2O75298 545 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 CLSTN1O94985 981 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 LUC7L3O95232 432 aaKnown RBP6.17□□□□□ -1.42
GYPB-204ENST00000504951 YEATS4O95619 227 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 SLC6A4P31645 630 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 RECQLP46063 649 aaPredicted RBP6.17□□□□□ -1.42
GYPB-204ENST00000504951 PSMD8P48556 350 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 TKTL1P51854 596 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 CNTN1Q12860 1018 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 KCNAB2Q13303 367 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 MTA1Q13330 715 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 SPIDRQ14159 915 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 CDKN3Q16667 212 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 CLPPQ16740 277 aaPredicted RBP6.17□□□□□ -1.42
GYPB-204ENST00000504951 FSCBQ5H9T9 825 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 RNF219Q5W0B1 726 aaPredicted RBP6.17□□□□□ -1.42
GYPB-204ENST00000504951 RESP18Q5W5W9 173 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 GUSBP11Q6P575 273 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 GCNT7Q6ZNI0 430 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 Q6ZSR6 202 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 VASH1Q7L8A9 365 aaPredicted RBP6.17□□□□□ -1.42
GYPB-204ENST00000504951 PARGQ86W56 976 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 TAS1R2Q8TE23 839 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 HTR3CQ8WXA8 447 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 PAGE5Q96GU1 130 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 SLC39A13Q96H72 371 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 C1QTNF2Q9BXJ5 285 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 MAGEF1Q9HAY2 307 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 SPASTQ9UBP0 616 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 SARDHQ9UL12 918 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 KIAA1257Q9ULG3 409 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 PCDHB11Q9Y5F2 797 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 DOCK9Q9BZ29 2069 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 C2CD3Q4AC94 2353 aa6.17□□□□□ -1.42
GYPB-204ENST00000504951 TDRD6O60522 2096 aaKnown RBP6.16□□□□□ -1.42
GYPB-204ENST00000504951 CXorf51AA0A1B0GTR3 108 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 A0A1W2PQU0 124 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 CPED1A4D0V7 1026 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 TTLL8A6PVC2 850 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 YJEFN3A6XGL0 299 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 E7ENQ6 273 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 SLC31A1O15431 190 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 KRT38O76015 456 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 DDAH2O95865 285 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 HLA-DRAP01903 254 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 NR3C1P04150 777 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 TRIM49P0CI25 452 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 TRIM49CP0CI26 452 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 ELAVL4P26378 380 aaKnown RBP6.16□□□□□ -1.42
GYPB-204ENST00000504951 MAT2AP31153 395 aaKnown RBP6.16□□□□□ -1.42
GYPB-204ENST00000504951 GCLMP48507 274 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 GSK3AP49840 483 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 DAOAP59103 153 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 PFN3P60673 137 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 YPEL5P62699 121 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 PPP3CAQ08209 521 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 EIF4EBP2Q13542 120 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms