RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 ECT2LQ008S8 904 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 IL10RBQ08334 325 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 XRCC4Q13426 336 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 CAMK2GQ13555 558 aaPredicted RBP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 HNRNPDQ14103 355 aaKnown RBP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 KRT81Q14533 505 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 POLD3Q15054 466 aaPredicted RBP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 KCTD19Q17RG1 926 aaPredicted RBP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 HNRNPA1L2Q32P51 320 aaKnown RBP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 FBXO43Q4G163 708 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 C9orf64Q5T6V5 341 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 TTC27Q6P3X3 843 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 LINGO4Q6UY18 593 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 SYT10Q6XYQ8 523 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 B4GALNT4Q76KP1 1039 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 PLPP6Q8IY26 295 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 ALLCQ8N6M5 410 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 UBL4BQ8N7F7 174 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 C12orf50Q8NA57 414 aaPredicted RBP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 TSEN2Q8NCE0 465 aaKnown RBP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 OR2A12Q8NGT7 310 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 ARRDC2Q8TBH0 407 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 WFIKKN2Q8TEU8 576 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 ATG4AQ8WYN0 398 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 ISG20Q96AZ6 181 aaKnown RBP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 C16orf45Q96MC5 204 aaPredicted RBP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 QKIQ96PU8 341 aaKnown RBP eCLIP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 PSKH2Q96QS6 385 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 FAM129BQ96TA1 746 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 NELL2Q99435 816 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 FAM118BQ9BPY3 351 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 MKRN2Q9H000 416 aaKnown RBP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 C10orf88Q9H8K7 445 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 CACNA2D2Q9NY47 1150 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 IPO11Q9UI26 975 aaKnown RBP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 VPS28Q9UK41 221 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 SARDHQ9UL12 918 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 DNPEPQ9ULA0 475 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 MMP17Q9ULZ9 603 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 RAD54BQ9Y620 910 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 WASF2Q9Y6W5 498 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 BCLAF3A2AJT9 711 aaKnown RBP5.03□□□□□ -1.6
LMNB1-208ENST00000504788 TBC1D3BA6NDS4 549 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 TMEM221A6NGB7 291 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 FAM170BA6NMN3 283 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 TTC34A8MYJ7 566 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 M0R296 226 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 KCNK1O00180 336 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 CBX4O00257 560 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 TRAFD1O14545 582 aaPredicted RBP5.03□□□□□ -1.6
LMNB1-208ENST00000504788 APOL1O14791 398 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 MATN3O15232 486 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 NCAM2O15394 837 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 SPINT1O43278 529 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 TIMM44O43615 452 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 LIASO43766 372 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 FZD6O60353 706 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 TMCC1O94876 653 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 ASLP04424 464 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 APODP05090 189 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 DCNP07585 359 aaKnown RBP5.03□□□□□ -1.6
LMNB1-208ENST00000504788 ALADP13716 330 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 HLA-EP13747 358 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 IVDP26440 423 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 SERPINB6P35237 376 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 CLCN5P51795 746 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 METAP1P53582 386 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 OXCT1P55809 520 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 DYNLT1P63172 113 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 MRPS21P82921 87 aaKnown RBP5.03□□□□□ -1.6
LMNB1-208ENST00000504788 MTAPQ13126 283 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 MSLNQ13421 630 aaPredicted RBP5.03□□□□□ -1.6
LMNB1-208ENST00000504788 TFDP2Q14188 446 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 CRY1Q16526 586 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 CCNG2Q16589 344 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 SLC45A4Q5BKX6 768 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 KAZNQ674X7 775 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 LEKR1Q6ZMV7 388 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 SYT13Q7L8C5 426 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 RASSF3Q86WH2 238 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 ZSWIM9Q86XI8 627 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 LRRC49Q8IUZ0 686 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 ZNF366Q8N895 744 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 ZNF513Q8N8E2 541 aaPredicted RBP5.03□□□□□ -1.6
LMNB1-208ENST00000504788 RPLP0P6Q8NHW5 317 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 ECHDC3Q96DC8 303 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 ZNF599Q96NL3 588 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 NAPGQ99747 312 aaPredicted RBP5.03□□□□□ -1.6
LMNB1-208ENST00000504788 MGME1Q9BQP7 344 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 C2orf49Q9BVC5 232 aaPredicted RBP5.03□□□□□ -1.6
LMNB1-208ENST00000504788 LMAN1LQ9HAT1 526 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 ATP13A1Q9HD20 1204 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 CD93Q9NPY3 652 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 PRSS16Q9NQE7 514 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 PRMT8Q9NR22 394 aaPredicted RBP5.03□□□□□ -1.6
LMNB1-208ENST00000504788 EBF1Q9UH73 591 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 NDRG2Q9UN36 371 aaKnown RBP5.03□□□□□ -1.6
LMNB1-208ENST00000504788 ATP8A1Q9Y2Q0 1164 aa5.03□□□□□ -1.6
LMNB1-208ENST00000504788 FCF1Q9Y324 198 aaKnown RBP5.03□□□□□ -1.6
LMNB1-208ENST00000504788 HEY1Q9Y5J3 304 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms