RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 GKN1Q9NS71 199 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 GDAP2Q9NXN4 497 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 FBXW11Q9UKB1 542 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 TBC1D3BA6NDS4 549 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 METTL18O95568 372 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 LAG3P18627 525 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 GRK2P25098 689 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 SERPINB3P29508 390 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 NUDT2P50583 147 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 CORO7P57737 925 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 CRYMQ14894 314 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 TRABD2AQ86V40 505 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 AGGF1Q8N302 714 aaeCLIP14.3□□□□□ -0.127e-7■□□□□ 10.6
TCOF1-207ENST00000504761 SLC40A1Q9NP59 571 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 FZD10Q9ULW2 581 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 GNEQ9Y223 722 aaKnown RBP14.3□□□□□ -0.12
TCOF1-207ENST00000504761 BCLAF3A2AJT9 711 aaKnown RBP14.29□□□□□ -0.12
TCOF1-207ENST00000504761 KCNU1A8MYU2 1149 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 ITGA2BP08514 1039 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 PDHA1P08559 390 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 ABHD2P08910 425 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 SYN1P17600 705 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 IGFBP4P22692 258 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 GRIA1P42261 906 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 PPP3CCP48454 512 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 UGT3A1Q6NUS8 523 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 POU5F2Q8N7G0 328 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 PRDM16Q9HAZ2 1276 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 SLC17A7Q9P2U7 560 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 BEST1O76090 585 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 PCDH8O95206 1070 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 CDK18Q07002 472 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 TBCCQ15814 346 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 TMCO4Q5TGY1 634 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 MYO1HQ8N1T3 1032 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 CKAP2Q8WWK9 683 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 SUSD3Q96L08 255 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 ACSS2Q9NR19 701 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 TAS2R13Q9NYV9 303 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 FBXO5Q9UKT4 447 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 RNF103-CHMP3A0A140T963 221 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 MAPRE2Q15555 327 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 TRIM60Q495X7 471 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 KRT80Q6KB66 452 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 MLPHQ9BV36 600 aaPredicted RBP14.29□□□□□ -0.12
TCOF1-207ENST00000504761 NDE1Q9NXR1 346 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 RCOR3Q9P2K3 495 aaPredicted RBP14.29□□□□□ -0.12
TCOF1-207ENST00000504761 AGO1Q9UL18 857 aaKnown RBP14.29□□□□□ -0.12
TCOF1-207ENST00000504761 TCRBV7S3A2A0A539 114 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 CASQ2O14958 399 aaPredicted RBP14.29□□□□□ -0.12
TCOF1-207ENST00000504761 MYO1DO94832 1006 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 CBX6O95503 412 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 SERPINE1P05121 402 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 CCDC166P0CW27 439 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 PRMT2P55345 433 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 DSC2Q02487 901 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 C7orf61Q8IZ16 206 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 NIPA2Q8N8Q9 360 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 SLC35B2Q8TB61 432 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 CASP10Q92851 521 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 TMEM237Q96Q45 408 aa14.29□□□□□ -0.12
TCOF1-207ENST00000504761 KATNA1O75449 491 aa14.28□□□□□ -0.12
TCOF1-207ENST00000504761 E2F6O75461 281 aa14.28□□□□□ -0.12
TCOF1-207ENST00000504761 TSPAN8P19075 237 aa14.28□□□□□ -0.12
TCOF1-207ENST00000504761 TACR2P21452 398 aa14.28□□□□□ -0.12
TCOF1-207ENST00000504761 COPAP53621 1224 aa14.28□□□□□ -0.12
TCOF1-207ENST00000504761 AIF1P55008 147 aa14.28□□□□□ -0.12
TCOF1-207ENST00000504761 ITIH4Q14624 930 aa14.28□□□□□ -0.12
TCOF1-207ENST00000504761 LDB1Q86U70 411 aaPredicted RBP14.28□□□□□ -0.12
TCOF1-207ENST00000504761 IRGQQ8WZA9 623 aa14.28□□□□□ -0.12
TCOF1-207ENST00000504761 QKIQ96PU8 341 aaKnown RBP eCLIP14.28□□□□□ -0.12
TCOF1-207ENST00000504761 FAM124BQ9H5Z6 455 aaPredicted RBP14.28□□□□□ -0.12
TCOF1-207ENST00000504761 ALG9Q9H6U8 611 aa14.28□□□□□ -0.12
TCOF1-207ENST00000504761 CYLDQ9NQC7 956 aa14.28□□□□□ -0.12
TCOF1-207ENST00000504761 POLR2EP19388 210 aaKnown RBP14.28□□□□□ -0.12
TCOF1-207ENST00000504761 SLC11A1P49279 550 aa14.28□□□□□ -0.12
TCOF1-207ENST00000504761 AP2B1P63010 937 aa14.28□□□□□ -0.12
TCOF1-207ENST00000504761 GAD2Q05329 585 aa14.28□□□□□ -0.12
TCOF1-207ENST00000504761 DPYSL2Q16555 572 aa14.28□□□□□ -0.12
TCOF1-207ENST00000504761 RAB6CQ53S08 254 aa14.28□□□□□ -0.12
TCOF1-207ENST00000504761 GPR158Q5T848 1215 aa14.28□□□□□ -0.12
TCOF1-207ENST00000504761 RASIP1Q5U651 963 aa14.28□□□□□ -0.12
TCOF1-207ENST00000504761 TTC7BQ86TV6 843 aa14.28□□□□□ -0.12
TCOF1-207ENST00000504761 PSMG2Q969U7 264 aa14.28□□□□□ -0.12
TCOF1-207ENST00000504761 PEBP4Q96S96 227 aa14.28□□□□□ -0.12
TCOF1-207ENST00000504761 RAB6CQ9H0N0 254 aa14.28□□□□□ -0.12
TCOF1-207ENST00000504761 MFHAS1Q9Y4C4 1052 aa14.28□□□□□ -0.12
TCOF1-207ENST00000504761 V9GYQ6 96 aa14.28□□□□□ -0.12
TCOF1-207ENST00000504761 BTN3A1O00481 513 aa14.28□□□□□ -0.12
TCOF1-207ENST00000504761 MPOP05164 745 aa14.28□□□□□ -0.12
TCOF1-207ENST00000504761 GJA1P17302 382 aa14.28□□□□□ -0.12
TCOF1-207ENST00000504761 SLC25A11Q02978 314 aaKnown RBP14.28□□□□□ -0.12
TCOF1-207ENST00000504761 CYP1B1Q16678 543 aa14.28□□□□□ -0.12
TCOF1-207ENST00000504761 RHBDF2Q6PJF5 856 aa14.28□□□□□ -0.12
TCOF1-207ENST00000504761 KCTD4Q8WVF5 259 aa14.28□□□□□ -0.12
TCOF1-207ENST00000504761 TPBGLP0DKB5 382 aa14.27□□□□□ -0.12
TCOF1-207ENST00000504761 SERPINA4P29622 427 aa14.27□□□□□ -0.12
TCOF1-207ENST00000504761 AFF1P51825 1210 aaKnown RBP14.27□□□□□ -0.12
TCOF1-207ENST00000504761 RPS24P62847 133 aaKnown RBP14.27□□□□□ -0.12
TCOF1-207ENST00000504761 MTA1Q13330 715 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms