RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 FBXO48Q5FWF7 155 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 MROH9Q5TGP6 573 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 CHST3Q7LGC8 479 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 BNIPLQ7Z465 357 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 NHLRC2Q8NBF2 726 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 OR9A1PQ8NGU1 263 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 FBXO32Q969P5 355 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 FAM162AQ96A26 154 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 TMCO6Q96DC7 493 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 HIST1H2AHQ96KK5 128 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 HIST1H2AJQ99878 128 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 DKK4Q9UBT3 224 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 RAB21Q9UL25 225 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 ASTN2O75129 1339 aaPredicted RBP5.37□□□□□ -1.55
NIPBL-204ENST00000504430 TRBC2A0A5B9 178 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 TARSL2A2RTX5 802 aaKnown RBP5.37□□□□□ -1.55
NIPBL-204ENST00000504430 FAM90A7PA6NKC0 464 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 FAM90A22PA8MWA6 464 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 FAM90A12PA8MX19 464 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 FAM90A23PA8MXZ1 464 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 HRKO00198 91 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 FUT1P19526 365 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 KCNA5P22460 613 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 TUBG1P23258 451 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 PSMA4P25789 261 aaKnown RBP5.37□□□□□ -1.55
NIPBL-204ENST00000504430 WNT5AP41221 380 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 PRAMEP78395 509 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 KLF10Q13118 480 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 NPY5RQ15761 445 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 TWISTNBQ3B726 338 aaPredicted RBP5.37□□□□□ -1.55
NIPBL-204ENST00000504430 SH2D4BQ5SQS7 431 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 CAPRIN2Q6IMN6 1127 aaKnown RBP5.37□□□□□ -1.55
NIPBL-204ENST00000504430 FAM214BQ7L5A3 538 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 ZDHHC17Q8IUH5 632 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 YAF2Q8IY57 180 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 FAM46DQ8NEK8 389 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 HUS1BQ8NHY5 278 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 ANKRD7Q92527 254 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 C8orf76Q96K31 380 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 IFT74Q96LB3 600 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 FIZ1Q96SL8 496 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 RBM15Q96T37 977 aaKnown RBP eCLIP5.37□□□□□ -1.553e-7■■■■■ 28.2
NIPBL-204ENST00000504430 TUBA1CQ9BQE3 449 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 CLSTN3Q9BQT9 956 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 FBRSL1Q9HCM7 1045 aaKnown RBP5.37□□□□□ -1.55
NIPBL-204ENST00000504430 WDR6Q9NNW5 1121 aaKnown RBP5.37□□□□□ -1.55
NIPBL-204ENST00000504430 GPR108Q9NPR9 543 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 ARHGEF3Q9NR81 526 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 TUBG2Q9NRH3 451 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 GPRC5DQ9NZD1 345 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 ANAPC2Q9UJX6 822 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 GMEB2Q9UKD1 530 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 CHKBQ9Y259 395 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 C15orf41Q9Y2V0 281 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 CENPJQ9HC77 1338 aaPredicted RBP5.37□□□□□ -1.55
NIPBL-204ENST00000504430 MFSD2BA6NFX1 497 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 AGPSO00116 658 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 E2F3O00716 465 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 NRG2O14511 850 aaPredicted RBP5.36□□□□□ -1.55
NIPBL-204ENST00000504430 MED7O43513 233 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 SMC2O95347 1197 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 FAM58BPP0C7Q3 252 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 ACP5P13686 325 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 UFM1P61960 85 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 XKR9Q5GH70 373 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 AFMIDQ63HM1 303 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 ARL6IP4Q66PJ3 421 aaKnown RBP5.36□□□□□ -1.55
NIPBL-204ENST00000504430 CACNA2D4Q7Z3S7 1137 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 ADCK1Q86TW2 530 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 CD302Q8IX05 232 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 ZCCHC7Q8N3Z6 543 aaKnown RBP5.36□□□□□ -1.55
NIPBL-204ENST00000504430 TEKT4Q8WW24 435 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 PEX13Q92968 403 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 KIAA1143Q96AT1 154 aaPredicted RBP5.36□□□□□ -1.55
NIPBL-204ENST00000504430 ELMOD3Q96FG2 381 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 HSPA12BQ96MM6 686 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 LRRC37BQ96QE4 947 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 MGME1Q9BQP7 344 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 PITHD1Q9GZP4 211 aaPredicted RBP5.36□□□□□ -1.55
NIPBL-204ENST00000504430 IKZF4Q9H2S9 585 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 CENPMQ9NSP4 180 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 DNAJC11Q9NVH1 559 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 SPATA7Q9P0W8 599 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 PRSS23O95084 383 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 S100A9P06702 114 aaKnown RBP5.36□□□□□ -1.55
NIPBL-204ENST00000504430 ABCB1P08183 1280 aaPredicted RBP5.36□□□□□ -1.55
NIPBL-204ENST00000504430 VIMP08670 466 aaKnown RBP5.36□□□□□ -1.55
NIPBL-204ENST00000504430 ELNP15502 786 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 CKMT2P17540 419 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 SAT1P21673 171 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 PTTG1IPP53801 180 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 ARSFP54793 590 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 THOC5Q13769 683 aaKnown RBP5.36□□□□□ -1.55
NIPBL-204ENST00000504430 Q5PR19 223 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 ETFRF1Q6IPR1 90 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 CES3Q6UWW8 571 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 SEZ6L2Q6UXD5 910 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 SPATA19Q7Z5L4 167 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 ABRAQ8N0Z2 381 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 FBXL20Q96IG2 436 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms