RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 ZFP36L1Q07352 338 aaKnown RBP12.85□□□□□ -0.35
LSM6-204ENST00000504181 INCA1Q0VD86 236 aa12.85□□□□□ -0.35
LSM6-204ENST00000504181 CDC20Q12834 499 aa12.85□□□□□ -0.35
LSM6-204ENST00000504181 TCEA2Q15560 299 aa12.85□□□□□ -0.35
LSM6-204ENST00000504181 SGSM1Q2NKQ1 1148 aa12.85□□□□□ -0.35
LSM6-204ENST00000504181 EIF2S3LQ2VIR3 472 aaKnown RBP12.85□□□□□ -0.35
LSM6-204ENST00000504181 TMEM259Q4ZIN3 620 aa12.85□□□□□ -0.35
LSM6-204ENST00000504181 PM20D1Q6GTS8 502 aa12.85□□□□□ -0.35
LSM6-204ENST00000504181 STXBP4Q6ZWJ1 553 aa12.85□□□□□ -0.35
LSM6-204ENST00000504181 PHACTR4Q8IZ21 702 aa12.85□□□□□ -0.35
LSM6-204ENST00000504181 ARL10Q8N8L6 244 aa12.85□□□□□ -0.35
LSM6-204ENST00000504181 Q8N9G6 341 aaPredicted RBP12.85□□□□□ -0.35
LSM6-204ENST00000504181 PDCD6IPQ8WUM4 868 aaKnown RBP12.85□□□□□ -0.35
LSM6-204ENST00000504181 PMEPA1Q969W9 287 aa12.85□□□□□ -0.35
LSM6-204ENST00000504181 EPAS1Q99814 870 aa12.85□□□□□ -0.35
LSM6-204ENST00000504181 NUCKS1Q9H1E3 243 aaKnown RBP12.85□□□□□ -0.35
LSM6-204ENST00000504181 GGT7Q9UJ14 662 aa12.85□□□□□ -0.35
LSM6-204ENST00000504181 PNMA8BQ9ULN7 279 aaPredicted RBP12.85□□□□□ -0.35
LSM6-204ENST00000504181 DOLKQ9UPQ8 538 aa12.85□□□□□ -0.35
LSM6-204ENST00000504181 RNF215Q9Y6U7 377 aa12.85□□□□□ -0.35
LSM6-204ENST00000504181 TACC2O95359 2948 aa12.85□□□□□ -0.35
LSM6-204ENST00000504181 KPNA3O00505 521 aaPredicted RBP12.84□□□□□ -0.35
LSM6-204ENST00000504181 MCF2LO15068 1137 aa12.84□□□□□ -0.35
LSM6-204ENST00000504181 ALOX15BO15296 676 aa12.84□□□□□ -0.35
LSM6-204ENST00000504181 TGFB1I1O43294 461 aa12.84□□□□□ -0.35
LSM6-204ENST00000504181 PAK4O96013 591 aaPredicted RBP12.84□□□□□ -0.35
LSM6-204ENST00000504181 IGLV3-27P01718 113 aa12.84□□□□□ -0.35
LSM6-204ENST00000504181 CTSLP07711 333 aa12.84□□□□□ -0.35
LSM6-204ENST00000504181 CCL4P13236 92 aa12.84□□□□□ -0.35
LSM6-204ENST00000504181 PRF1P14222 555 aa12.84□□□□□ -0.35
LSM6-204ENST00000504181 TSHRP16473 764 aa12.84□□□□□ -0.35
LSM6-204ENST00000504181 ITGB7P26010 798 aa12.84□□□□□ -0.35
LSM6-204ENST00000504181 OAS2P29728 719 aaKnown RBP12.84□□□□□ -0.35
LSM6-204ENST00000504181 UGT1A3P35503 534 aa12.84□□□□□ -0.35
LSM6-204ENST00000504181 C16orf72Q14CZ0 275 aa12.84□□□□□ -0.35
LSM6-204ENST00000504181 ZNF394Q53GI3 561 aa12.84□□□□□ -0.35
LSM6-204ENST00000504181 DCAF6Q58WW2 860 aa12.84□□□□□ -0.35
LSM6-204ENST00000504181 BSPRYQ5W0U4 402 aa12.84□□□□□ -0.35
LSM6-204ENST00000504181 CCNJLQ8IV13 435 aa12.84□□□□□ -0.35
LSM6-204ENST00000504181 UNC45BQ8IWX7 931 aa12.84□□□□□ -0.35
LSM6-204ENST00000504181 CACNA2D3Q8IZS8 1091 aa12.84□□□□□ -0.35
LSM6-204ENST00000504181 SLC17A9Q9BYT1 436 aa12.84□□□□□ -0.35
LSM6-204ENST00000504181 CDH19Q9H159 772 aa12.84□□□□□ -0.35
LSM6-204ENST00000504181 DIDO1Q9BTC0 2240 aaKnown RBP12.83□□□□□ -0.36
LSM6-204ENST00000504181 YJEFN3A6XGL0 299 aa12.83□□□□□ -0.36
LSM6-204ENST00000504181 E7ENQ6 273 aa12.83□□□□□ -0.36
LSM6-204ENST00000504181 TULP2O00295 520 aa12.83□□□□□ -0.36
LSM6-204ENST00000504181 FPGTO14772 594 aa12.83□□□□□ -0.36
LSM6-204ENST00000504181 PDGFRAP16234 1089 aa12.83□□□□□ -0.36
LSM6-204ENST00000504181 GJB2P29033 226 aa12.83□□□□□ -0.36
LSM6-204ENST00000504181 NAA30Q147X3 362 aaPredicted RBP12.83□□□□□ -0.36
LSM6-204ENST00000504181 DLG2Q15700 870 aa12.83□□□□□ -0.36
LSM6-204ENST00000504181 MS4A13Q5J8X5 152 aa12.83□□□□□ -0.36
LSM6-204ENST00000504181 RRAGBQ5VZM2 374 aa12.83□□□□□ -0.36
LSM6-204ENST00000504181 ASB18Q6ZVZ8 466 aa12.83□□□□□ -0.36
LSM6-204ENST00000504181 PCDH19Q8TAB3 1148 aa12.83□□□□□ -0.36
LSM6-204ENST00000504181 POM121Q96HA1 1249 aa12.83□□□□□ -0.36
LSM6-204ENST00000504181 SLC45A3Q96JT2 553 aa12.83□□□□□ -0.36
LSM6-204ENST00000504181 DDX50Q9BQ39 737 aaKnown RBP12.83□□□□□ -0.36
LSM6-204ENST00000504181 SRRTQ9BXP5 876 aaKnown RBP12.83□□□□□ -0.36
LSM6-204ENST00000504181 SLC13A1Q9BZW2 595 aa12.83□□□□□ -0.36
LSM6-204ENST00000504181 SEMA6CQ9H3T2 930 aa12.83□□□□□ -0.36
LSM6-204ENST00000504181 DYRK4Q9NR20 520 aa12.83□□□□□ -0.36
LSM6-204ENST00000504181 ABCC13Q9NSE7 274 aa12.83□□□□□ -0.36
LSM6-204ENST00000504181 CCDC39Q9UFE4 941 aa12.83□□□□□ -0.36
LSM6-204ENST00000504181 SLC25A13Q9UJS0 675 aa12.83□□□□□ -0.36
LSM6-204ENST00000504181 LIMCH1Q9UPQ0 1083 aa12.83□□□□□ -0.36
LSM6-204ENST00000504181 NAALADL1Q9UQQ1 740 aa12.83□□□□□ -0.36
LSM6-204ENST00000504181 RNF103O00237 685 aa12.82□□□□□ -0.36
LSM6-204ENST00000504181 ASS1P00966 412 aaKnown RBP12.82□□□□□ -0.36
LSM6-204ENST00000504181 LDLRP01130 860 aa12.82□□□□□ -0.36
LSM6-204ENST00000504181 AP3M2P53677 418 aa12.82□□□□□ -0.36
LSM6-204ENST00000504181 TBX4P57082 545 aa12.82□□□□□ -0.36
LSM6-204ENST00000504181 SULT2A1Q06520 285 aa12.82□□□□□ -0.36
LSM6-204ENST00000504181 ADIGQ0VDE8 80 aa12.82□□□□□ -0.36
LSM6-204ENST00000504181 MRPL49Q13405 166 aaKnown RBP12.82□□□□□ -0.36
LSM6-204ENST00000504181 ATP1A1-AS1Q5TC04 95 aa12.82□□□□□ -0.36
LSM6-204ENST00000504181 FAXCQ5TGI0 409 aa12.82□□□□□ -0.36
LSM6-204ENST00000504181 SLITRK4Q8IW52 837 aa12.82□□□□□ -0.36
LSM6-204ENST00000504181 NELFCDQ8IXH7 590 aa12.82□□□□□ -0.36
LSM6-204ENST00000504181 CCDC65Q8IXS2 484 aa12.82□□□□□ -0.36
LSM6-204ENST00000504181 PRR7Q8TB68 274 aa12.82□□□□□ -0.36
LSM6-204ENST00000504181 PARD3BQ8TEW8 1205 aa12.82□□□□□ -0.36
LSM6-204ENST00000504181 ERCC4Q92889 916 aaPredicted RBP12.82□□□□□ -0.36
LSM6-204ENST00000504181 TCTN2Q96GX1 697 aa12.82□□□□□ -0.36
LSM6-204ENST00000504181 UBXN6Q9BZV1 441 aa12.82□□□□□ -0.36
LSM6-204ENST00000504181 B3GNT4Q9C0J1 378 aa12.82□□□□□ -0.36
LSM6-204ENST00000504181 NIPBLQ6KC79 2804 aaeCLIP12.82□□□□□ -0.36
LSM6-204ENST00000504181 SPTLC2O15270 562 aa12.81□□□□□ -0.36
LSM6-204ENST00000504181 ATP9BO43861 1147 aa12.81□□□□□ -0.36
LSM6-204ENST00000504181 RAD1O60671 282 aa12.81□□□□□ -0.36
LSM6-204ENST00000504181 MOCS2O96007 188 aaPredicted RBP12.81□□□□□ -0.36
LSM6-204ENST00000504181 PIK3CAP42336 1068 aa12.81□□□□□ -0.36
LSM6-204ENST00000504181 RECQLP46063 649 aaPredicted RBP12.81□□□□□ -0.36
LSM6-204ENST00000504181 THOP1P52888 689 aa12.81□□□□□ -0.36
LSM6-204ENST00000504181 RPS21P63220 83 aaKnown RBP12.81□□□□□ -0.36
LSM6-204ENST00000504181 DLG4P78352 724 aa12.81□□□□□ -0.36
LSM6-204ENST00000504181 CCDC15Q0P6D6 951 aa12.81□□□□□ -0.36
LSM6-204ENST00000504181 PTK2BQ14289 1009 aa12.81□□□□□ -0.36
LSM6-204ENST00000504181 ARHGAP44Q17R89 818 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms