RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 OR2A12Q8NGT7 310 aa22.53■■□□□ 1.2
LSM6-203ENST00000503982 FAM172AQ8WUF8 416 aa22.53■■□□□ 1.2
LSM6-203ENST00000503982 PPP1R16AQ96I34 528 aa22.53■■□□□ 1.2
LSM6-203ENST00000503982 PREBQ9HCU5 417 aa22.53■■□□□ 1.2
LSM6-203ENST00000503982 PPARGC1AQ9UBK2 798 aaKnown RBP22.53■■□□□ 1.2
LSM6-203ENST00000503982 DNAI1Q9UI46 699 aa22.53■■□□□ 1.2
LSM6-203ENST00000503982 DMTF1Q9Y222 760 aa22.53■■□□□ 1.2
LSM6-203ENST00000503982 MAGEC1O60732 1142 aa22.52■■□□□ 1.2
LSM6-203ENST00000503982 PCDH8O95206 1070 aa22.52■■□□□ 1.2
LSM6-203ENST00000503982 UNGP13051 313 aaPredicted RBP22.52■■□□□ 1.2
LSM6-203ENST00000503982 GPD1P21695 349 aa22.52■■□□□ 1.2
LSM6-203ENST00000503982 ADRA1BP35368 520 aa22.52■■□□□ 1.2
LSM6-203ENST00000503982 NUDT1P36639 197 aa22.52■■□□□ 1.2
LSM6-203ENST00000503982 DNAJC24Q6P3W2 148 aa22.52■■□□□ 1.2
LSM6-203ENST00000503982 SCYL2Q6P3W7 929 aa22.52■■□□□ 1.2
LSM6-203ENST00000503982 BNIPLQ7Z465 357 aa22.52■■□□□ 1.2
LSM6-203ENST00000503982 TRIM69Q86WT6 500 aa22.52■■□□□ 1.2
LSM6-203ENST00000503982 OXR1Q8N573 874 aa22.52■■□□□ 1.2
LSM6-203ENST00000503982 TMIEQ8NEW7 156 aa22.52■■□□□ 1.2
LSM6-203ENST00000503982 BAHD1Q8TBE0 780 aaPredicted RBP22.52■■□□□ 1.2
LSM6-203ENST00000503982 ARRDC3Q96B67 414 aa22.52■■□□□ 1.2
LSM6-203ENST00000503982 PCDHB18PQ96TA0 734 aa22.52■■□□□ 1.2
LSM6-203ENST00000503982 HPCAL4Q9UM19 191 aa22.52■■□□□ 1.2
LSM6-203ENST00000503982 C2CD4BA6NLJ0 364 aa22.51■■□□□ 1.19
LSM6-203ENST00000503982 SLC31A1O15431 190 aa22.51■■□□□ 1.19
LSM6-203ENST00000503982 YKT6O15498 198 aa22.51■■□□□ 1.19
LSM6-203ENST00000503982 LATO43561 262 aa22.51■■□□□ 1.19
LSM6-203ENST00000503982 CCDC172P0C7W6 258 aa22.51■■□□□ 1.19
LSM6-203ENST00000503982 DESP17661 470 aa22.51■■□□□ 1.19
LSM6-203ENST00000503982 ETFBP38117 255 aa22.51■■□□□ 1.19
LSM6-203ENST00000503982 PTPN9P43378 593 aa22.51■■□□□ 1.19
LSM6-203ENST00000503982 SERPINH1P50454 418 aaKnown RBP22.51■■□□□ 1.19
LSM6-203ENST00000503982 NXPH1P58417 271 aa22.51■■□□□ 1.19
LSM6-203ENST00000503982 STRADAQ7RTN6 431 aa22.51■■□□□ 1.19
LSM6-203ENST00000503982 MFSD2AQ8NA29 543 aa22.51■■□□□ 1.19
LSM6-203ENST00000503982 TBC1D31Q96DN5 1066 aa22.51■■□□□ 1.19
LSM6-203ENST00000503982 AGPAT1Q99943 283 aa22.51■■□□□ 1.19
LSM6-203ENST00000503982 FCF1Q9Y324 198 aaKnown RBP22.51■■□□□ 1.19
LSM6-203ENST00000503982 PLXNB3Q9ULL4 1909 aa22.51■■□□□ 1.19
LSM6-203ENST00000503982 A0A1W2PQU0 124 aa22.5■■□□□ 1.19
LSM6-203ENST00000503982 PRAMEF26H0Y7S4 382 aa22.5■■□□□ 1.19
LSM6-203ENST00000503982 LEFTY1O75610 366 aa22.5■■□□□ 1.19
LSM6-203ENST00000503982 LDOC1O95751 146 aaPredicted RBP22.5■■□□□ 1.19
LSM6-203ENST00000503982 ACVRL1P37023 503 aa22.5■■□□□ 1.19
LSM6-203ENST00000503982 SLC20A2Q08357 652 aa22.5■■□□□ 1.19
LSM6-203ENST00000503982 DPY19L3Q6ZPD9 716 aa22.5■■□□□ 1.19
LSM6-203ENST00000503982 ERN2Q76MJ5 926 aaKnown RBP22.5■■□□□ 1.19
LSM6-203ENST00000503982 EID2Q8N6I1 236 aa22.5■■□□□ 1.19
LSM6-203ENST00000503982 PCDH20Q8N6Y1 951 aaKnown RBP22.5■■□□□ 1.19
LSM6-203ENST00000503982 KLHDC7BQ96G42 594 aa22.5■■□□□ 1.19
LSM6-203ENST00000503982 ERGIC2Q96RQ1 377 aa22.5■■□□□ 1.19
LSM6-203ENST00000503982 TM6SF2Q9BZW4 377 aa22.5■■□□□ 1.19
LSM6-203ENST00000503982 ZDHHC6Q9H6R6 413 aa22.5■■□□□ 1.19
LSM6-203ENST00000503982 ARHGAP20Q9P2F6 1191 aa22.5■■□□□ 1.19
LSM6-203ENST00000503982 CA5BQ9Y2D0 317 aa22.5■■□□□ 1.19
LSM6-203ENST00000503982 IGF2RP11717 2491 aa22.5■■□□□ 1.19
LSM6-203ENST00000503982 TDRD6O60522 2096 aaKnown RBP22.5■■□□□ 1.19
LSM6-203ENST00000503982 PLEKP08567 350 aaPredicted RBP22.49■■□□□ 1.19
LSM6-203ENST00000503982 PRLRP16471 622 aa22.49■■□□□ 1.19
LSM6-203ENST00000503982 RHOQP17081 205 aa22.49■■□□□ 1.19
LSM6-203ENST00000503982 RFC1P35251 1148 aaPredicted RBP22.49■■□□□ 1.19
LSM6-203ENST00000503982 MAPKAPK2P49137 400 aa22.49■■□□□ 1.19
LSM6-203ENST00000503982 CARD16Q5EG05 197 aa22.49■■□□□ 1.19
LSM6-203ENST00000503982 PIP5KL1Q5T9C9 394 aa22.49■■□□□ 1.19
LSM6-203ENST00000503982 APTXQ7Z2E3 356 aaKnown RBP22.49■■□□□ 1.19
LSM6-203ENST00000503982 PHF13Q86YI8 300 aaPredicted RBP22.49■■□□□ 1.19
LSM6-203ENST00000503982 CCDC185Q8N715 623 aa22.49■■□□□ 1.19
LSM6-203ENST00000503982 FAM131CQ96AQ9 280 aa22.49■■□□□ 1.19
LSM6-203ENST00000503982 CNDP2Q96KP4 475 aaKnown RBP22.49■■□□□ 1.19
LSM6-203ENST00000503982 HEPHQ9BQS7 1158 aa22.49■■□□□ 1.19
LSM6-203ENST00000503982 CEP44Q9C0F1 390 aa22.49■■□□□ 1.19
LSM6-203ENST00000503982 OSBPL2Q9H1P3 480 aa22.49■■□□□ 1.19
LSM6-203ENST00000503982 ACTL7AQ9Y615 435 aa22.49■■□□□ 1.19
LSM6-203ENST00000503982 FAM221BA6H8Z2 402 aa22.48■■□□□ 1.19
LSM6-203ENST00000503982 ENC1O14682 589 aa22.48■■□□□ 1.19
LSM6-203ENST00000503982 FERP16591 822 aa22.48■■□□□ 1.19
LSM6-203ENST00000503982 TNFAIP3P21580 790 aa22.48■■□□□ 1.19
LSM6-203ENST00000503982 EPHA8P29322 1005 aaPredicted RBP22.48■■□□□ 1.19
LSM6-203ENST00000503982 AKT2P31751 481 aa22.48■■□□□ 1.19
LSM6-203ENST00000503982 CCNHP51946 323 aaPredicted RBP22.48■■□□□ 1.19
LSM6-203ENST00000503982 TAS2R38P59533 333 aa22.48■■□□□ 1.19
LSM6-203ENST00000503982 ARF5P84085 180 aa22.48■■□□□ 1.19
LSM6-203ENST00000503982 SCAPQ12770 1279 aa22.48■■□□□ 1.19
LSM6-203ENST00000503982 PTP4A2Q12974 167 aa22.48■■□□□ 1.19
LSM6-203ENST00000503982 BNIP3Q12983 259 aa22.48■■□□□ 1.19
LSM6-203ENST00000503982 MAPK8IP2Q13387 824 aaPredicted RBP22.48■■□□□ 1.19
LSM6-203ENST00000503982 POLD3Q15054 466 aaPredicted RBP22.48■■□□□ 1.19
LSM6-203ENST00000503982 EFHC2Q5JST6 749 aa22.48■■□□□ 1.19
LSM6-203ENST00000503982 FBXL19Q6PCT2 694 aa22.48■■□□□ 1.19
LSM6-203ENST00000503982 DCUN1D2Q6PH85 259 aa22.48■■□□□ 1.19
LSM6-203ENST00000503982 WDR59Q6PJI9 974 aa22.48■■□□□ 1.19
LSM6-203ENST00000503982 LEKR1Q6ZMV7 388 aa22.48■■□□□ 1.19
LSM6-203ENST00000503982 SLFN11Q7Z7L1 901 aa22.48■■□□□ 1.19
LSM6-203ENST00000503982 HORMAD1Q86X24 394 aa22.48■■□□□ 1.19
LSM6-203ENST00000503982 GALNT15Q8N3T1 639 aa22.48■■□□□ 1.19
LSM6-203ENST00000503982 C3orf20Q8ND61 904 aa22.48■■□□□ 1.19
LSM6-203ENST00000503982 MCEEQ96PE7 176 aa22.48■■□□□ 1.19
LSM6-203ENST00000503982 MAGEB5Q9BZ81 275 aa22.48■■□□□ 1.19
LSM6-203ENST00000503982 CBX8Q9HC52 389 aa22.48■■□□□ 1.19
LSM6-203ENST00000503982 FZD3Q9NPG1 666 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms