RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 SCN8AQ9UQD0 1980 aa11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 OR2AT4A6NND4 320 aa11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 APBA3O96018 575 aa11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 ADD2P35612 726 aa11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 MAZP56270 477 aaKnown RBP11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 ZNF276Q8N554 614 aa11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 OR2L8Q8NGY9 312 aa11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 HDAC7Q8WUI4 952 aa11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 LXNQ9BS40 222 aa11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 GMPPBQ9Y5P6 360 aa11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 MAGI2Q86UL8 1455 aa11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 CASKO14936 926 aa11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 ZNF75CPQ92670 426 aaPredicted RBP11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 TMEM169Q96HH4 297 aa11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 RC3H2Q9HBD1 1191 aaKnown RBP11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 CEP170Q5SW79 1584 aa11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 USP17L3A6NCW0 530 aa11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 USP17L4A6NCW7 530 aa11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 OR56A5P0C7T3 313 aa11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 HSD17B2P37059 387 aa11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 PRCPP42785 496 aa11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 ABCA11PQ4W5N1 156 aa11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 NOL9Q5SY16 702 aaKnown RBP11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 RNF43Q68DV7 783 aa11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 USP17L1Q7RTZ2 530 aa11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 PHC3Q8NDX5 983 aa11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 OR52K2Q8NGK3 314 aa11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 TDRKHQ9Y2W6 561 aaKnown RBP11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 KANTRA0A1W2PQU2 76 aa11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 PET100P0DJ07 73 aa11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 JAMLQ86YT9 394 aa11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 APOBEC3FQ8IUX4 373 aaKnown RBP11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 FBXO39Q8N4B4 442 aa11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 GIPC3Q8TF64 312 aa11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 PLEKHG4BQ96PX9 1271 aa11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 PI4K2AQ9BTU6 479 aa11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 CDK12Q9NYV4 1490 aaPredicted RBP11.33□□□□□ -0.6
AC055713.1-201ENST00000498967 CST8O60676 142 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 MSL3P1P0C860 447 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 GSTT1P30711 240 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 DNASE1L1P49184 302 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 ARL10Q8N8L6 244 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 RASGRP4Q8TDF6 673 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 HDAC2Q92769 488 aaKnown RBP11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 KAT5Q92993 513 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 TMCO6Q96DC7 493 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 ZBTB14O43829 449 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 SLC28A2O43868 658 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 CHMP24386 653 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 ATF7IP2Q5U623 682 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 CCNI2Q6ZMN8 369 aaPredicted RBP11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 GALNT7Q86SF2 657 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 ZNF540Q8NDQ6 660 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 SPACA7Q96KW9 195 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 TELO2Q9Y4R8 837 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 OR10H2O60403 315 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 ITGA8P53708 1063 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 NAB2Q15742 525 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 ARMC10Q8N2F6 343 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 HNRNPLLQ8WVV9 542 aaKnown RBP11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 BHMTQ93088 406 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 RNF31Q96EP0 1072 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 TXN2Q99757 166 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 MTG1Q9BT17 334 aaPredicted RBP11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 LRRC1Q9BTT6 524 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 NOL11Q9H8H0 719 aaKnown RBP11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 FANCFQ9NPI8 374 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 MRPS33Q9Y291 106 aaKnown RBP11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 PCDHGB1Q9Y5G3 927 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 PPEF1O14829 653 aaPredicted RBP11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 KCNQ3O43525 872 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 HLA-DRAP01903 254 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 CDH13P55290 713 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 SQLEQ14534 574 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 SMAD1Q15797 465 aaKnown RBP11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 PIH1D2Q8WWB5 315 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 PNPLA3Q9NST1 481 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 IFT52Q9Y366 437 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 PCDHB7Q9Y5E2 793 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 TEX13CA0A0J9YWL9 993 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 SEC22BO75396 215 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 IFNA2P01563 188 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 NR2C2P49116 596 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 TSPAN5P62079 268 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 RASAL3Q86YV0 1011 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 SIPA1Q96FS4 1042 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 BTBD10Q9BSF8 475 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 PCDHA6Q9UN73 950 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 PCDHA8Q9Y5H6 950 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 TAF6LQ9Y6J9 622 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 AFF2P51816 1311 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 HOXA2O43364 376 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 IFNA4P05014 189 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 NAGLUP54802 743 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 E2F2Q14209 437 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 NOTUMQ6P988 496 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 ZNF720Q7Z2F6 126 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 CD101Q93033 1021 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms