RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 POM121BA6NF01 834 aa14.26□□□□□ -0.13
CCDC58-207ENST00000498466 CDRT15L2A8MXV6 281 aa14.26□□□□□ -0.13
CCDC58-207ENST00000498466 K7ERQ8 282 aa14.26□□□□□ -0.13
CCDC58-207ENST00000498466 AQP9O43315 295 aa14.26□□□□□ -0.13
CCDC58-207ENST00000498466 CLDN11O75508 207 aa14.26□□□□□ -0.13
CCDC58-207ENST00000498466 PAK4O96013 591 aaPredicted RBP14.26□□□□□ -0.13
CCDC58-207ENST00000498466 KRT5P13647 590 aa14.26□□□□□ -0.13
CCDC58-207ENST00000498466 NME1P15531 152 aaKnown RBP14.26□□□□□ -0.13
CCDC58-207ENST00000498466 GGCXP38435 758 aa14.26□□□□□ -0.13
CCDC58-207ENST00000498466 CSRP3P50461 194 aa14.26□□□□□ -0.13
CCDC58-207ENST00000498466 GCNT1Q02742 428 aa14.26□□□□□ -0.13
CCDC58-207ENST00000498466 LRRC63Q05C16 580 aa14.26□□□□□ -0.13
CCDC58-207ENST00000498466 CLN3Q13286 438 aa14.26□□□□□ -0.13
CCDC58-207ENST00000498466 PNOCQ13519 176 aa14.26□□□□□ -0.13
CCDC58-207ENST00000498466 FZD2Q14332 565 aa14.26□□□□□ -0.13
CCDC58-207ENST00000498466 NR0B2Q15466 257 aa14.26□□□□□ -0.13
CCDC58-207ENST00000498466 TAF5Q15542 800 aa14.26□□□□□ -0.13
CCDC58-207ENST00000498466 DEFB133Q30KQ1 61 aa14.26□□□□□ -0.13
CCDC58-207ENST00000498466 TMEM259Q4ZIN3 620 aa14.26□□□□□ -0.13
CCDC58-207ENST00000498466 ARSIQ5FYB1 569 aa14.26□□□□□ -0.13
CCDC58-207ENST00000498466 ZNF658Q5TYW1 1059 aaPredicted RBP14.26□□□□□ -0.13
CCDC58-207ENST00000498466 KYAT3Q6YP21 454 aaKnown RBP14.26□□□□□ -0.13
CCDC58-207ENST00000498466 TMEM110Q86TL2 294 aa14.26□□□□□ -0.13
CCDC58-207ENST00000498466 ARHGEF19Q8IW93 802 aa14.26□□□□□ -0.13
CCDC58-207ENST00000498466 HSCBQ8IWL3 235 aa14.26□□□□□ -0.13
CCDC58-207ENST00000498466 CHST14Q8NCH0 376 aa14.26□□□□□ -0.13
CCDC58-207ENST00000498466 PRR11Q96HE9 360 aaPredicted RBP14.26□□□□□ -0.13
CCDC58-207ENST00000498466 PPP1R16AQ96I34 528 aa14.26□□□□□ -0.13
CCDC58-207ENST00000498466 C2orf49Q9BVC5 232 aaPredicted RBP14.26□□□□□ -0.13
CCDC58-207ENST00000498466 HDAC8Q9BY41 377 aa14.26□□□□□ -0.13
CCDC58-207ENST00000498466 SLC17A9Q9BYT1 436 aa14.26□□□□□ -0.13
CCDC58-207ENST00000498466 TRIM4Q9C037 500 aa14.26□□□□□ -0.13
CCDC58-207ENST00000498466 IL36AQ9UHA7 158 aa14.26□□□□□ -0.13
CCDC58-207ENST00000498466 CSNK1G3Q9Y6M4 447 aa14.26□□□□□ -0.13
CCDC58-207ENST00000498466 SPTY2D1-AS1A0A0U1RR47 76 aa14.25□□□□□ -0.13
CCDC58-207ENST00000498466 PMS2P1A4D2B8 440 aa14.25□□□□□ -0.13
CCDC58-207ENST00000498466 EME2A4GXA9 379 aaPredicted RBP14.25□□□□□ -0.13
CCDC58-207ENST00000498466 RNF103O00237 685 aa14.25□□□□□ -0.13
CCDC58-207ENST00000498466 RIOK3O14730 519 aaKnown RBP14.25□□□□□ -0.13
CCDC58-207ENST00000498466 PMM2O15305 246 aa14.25□□□□□ -0.13
CCDC58-207ENST00000498466 MED7O43513 233 aa14.25□□□□□ -0.13
CCDC58-207ENST00000498466 SNAP91O60641 907 aa14.25□□□□□ -0.13
CCDC58-207ENST00000498466 TCEA3O75764 348 aa14.25□□□□□ -0.13
CCDC58-207ENST00000498466 TNFSF15O95150 251 aa14.25□□□□□ -0.13
CCDC58-207ENST00000498466 LETM1O95202 739 aaPredicted RBP14.25□□□□□ -0.13
CCDC58-207ENST00000498466 JUNDP17535 347 aa14.25□□□□□ -0.13
CCDC58-207ENST00000498466 RRM1P23921 792 aa14.25□□□□□ -0.13
CCDC58-207ENST00000498466 RABIFP47224 123 aa14.25□□□□□ -0.13
CCDC58-207ENST00000498466 CDH4P55283 916 aa14.25□□□□□ -0.13
CCDC58-207ENST00000498466 RPS21P63220 83 aaKnown RBP14.25□□□□□ -0.13
CCDC58-207ENST00000498466 NME3Q13232 169 aa14.25□□□□□ -0.13
CCDC58-207ENST00000498466 DRAP1Q14919 205 aaPredicted RBP14.25□□□□□ -0.13
CCDC58-207ENST00000498466 CCDC40Q4G0X9 1142 aa14.25□□□□□ -0.13
CCDC58-207ENST00000498466 DEFB106AQ8N104 65 aa14.25□□□□□ -0.13
CCDC58-207ENST00000498466 WDR36Q8NI36 951 aaKnown RBP14.25□□□□□ -0.13
CCDC58-207ENST00000498466 LMO3Q8TAP4 145 aa14.25□□□□□ -0.13
CCDC58-207ENST00000498466 LMX1AQ8TE12 382 aa14.25□□□□□ -0.13
CCDC58-207ENST00000498466 CCNL2Q96S94 520 aaPredicted RBP14.25□□□□□ -0.13
CCDC58-207ENST00000498466 IL12RB2Q99665 862 aa14.25□□□□□ -0.13
CCDC58-207ENST00000498466 SYNDIG1Q9H7V2 258 aa14.25□□□□□ -0.13
CCDC58-207ENST00000498466 GPR27Q9NS67 375 aa14.25□□□□□ -0.13
CCDC58-207ENST00000498466 VPS51Q9UID3 782 aa14.25□□□□□ -0.13
CCDC58-207ENST00000498466 SALL4Q9UJQ4 1053 aa14.25□□□□□ -0.13
CCDC58-207ENST00000498466 TBC1D30Q9Y2I9 924 aa14.25□□□□□ -0.13
CCDC58-207ENST00000498466 HS3ST4Q9Y661 456 aa14.25□□□□□ -0.13
CCDC58-207ENST00000498466 DOCK9Q9BZ29 2069 aa14.25□□□□□ -0.13
CCDC58-207ENST00000498466 PIEZO2Q9H5I5 2752 aa14.24□□□□□ -0.13
CCDC58-207ENST00000498466 A0A1W2PQ27 194 aa14.24□□□□□ -0.13
CCDC58-207ENST00000498466 A0A1W2PQ64 194 aa14.24□□□□□ -0.13
CCDC58-207ENST00000498466 MUSKO15146 869 aa14.24□□□□□ -0.13
CCDC58-207ENST00000498466 RAD51BO15315 384 aa14.24□□□□□ -0.13
CCDC58-207ENST00000498466 SMAD6O43541 496 aaKnown RBP14.24□□□□□ -0.13
CCDC58-207ENST00000498466 LEFTY1O75610 366 aa14.24□□□□□ -0.13
CCDC58-207ENST00000498466 ENDOD1O94919 500 aa14.24□□□□□ -0.13
CCDC58-207ENST00000498466 RHOCP08134 193 aa14.24□□□□□ -0.13
CCDC58-207ENST00000498466 RECQLP46063 649 aaPredicted RBP14.24□□□□□ -0.13
CCDC58-207ENST00000498466 NEK3P51956 506 aa14.24□□□□□ -0.13
CCDC58-207ENST00000498466 MTA1Q13330 715 aa14.24□□□□□ -0.13
CCDC58-207ENST00000498466 PDCLQ13371 301 aa14.24□□□□□ -0.13
CCDC58-207ENST00000498466 PDE1CQ14123 709 aaPredicted RBP14.24□□□□□ -0.13
CCDC58-207ENST00000498466 FGL2Q14314 439 aa14.24□□□□□ -0.13
CCDC58-207ENST00000498466 ARL13BQ3SXY8 428 aa14.24□□□□□ -0.13
CCDC58-207ENST00000498466 COBLL1Q53SF7 1204 aa14.24□□□□□ -0.13
CCDC58-207ENST00000498466 PERM1Q5SV97 790 aa14.24□□□□□ -0.13
CCDC58-207ENST00000498466 C6orf132Q5T0Z8 1188 aa14.24□□□□□ -0.13
CCDC58-207ENST00000498466 KIAA1161Q6NSJ0 714 aa14.24□□□□□ -0.13
CCDC58-207ENST00000498466 LINGO4Q6UY18 593 aa14.24□□□□□ -0.13
CCDC58-207ENST00000498466 C14orf80Q86SX3 495 aa14.24□□□□□ -0.13
CCDC58-207ENST00000498466 CLEC14AQ86T13 490 aa14.24□□□□□ -0.13
CCDC58-207ENST00000498466 GLMNQ92990 594 aa14.24□□□□□ -0.13
CCDC58-207ENST00000498466 FEM1CQ96JP0 617 aa14.24□□□□□ -0.13
CCDC58-207ENST00000498466 KREMEN1Q96MU8 473 aa14.24□□□□□ -0.13
CCDC58-207ENST00000498466 SLC2A13Q96QE2 648 aa14.24□□□□□ -0.13
CCDC58-207ENST00000498466 PSMB7Q99436 277 aa14.24□□□□□ -0.13
CCDC58-207ENST00000498466 SIK2Q9H0K1 926 aa14.24□□□□□ -0.13
CCDC58-207ENST00000498466 TNKS2Q9H2K2 1166 aa14.24□□□□□ -0.13
CCDC58-207ENST00000498466 IL17BQ9UHF5 180 aa14.24□□□□□ -0.13
CCDC58-207ENST00000498466 KLF15Q9UIH9 416 aa14.24□□□□□ -0.13
CCDC58-207ENST00000498466 NAV2Q8IVL1 2488 aa14.24□□□□□ -0.13
CCDC58-207ENST00000498466 CCDC187A0A096LP49 1063 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms