RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 FGGP02679 453 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 CXCL10P02778 98 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 ERBB2P04626 1255 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 RHOXF2BP0C7M4 288 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 FGFR1P11362 822 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 TYMPP19971 482 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 GPD1P21695 349 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 VAMP1P23763 118 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 PSMA2P25787 234 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 ADORA2BP29275 332 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 OR1G1P47890 313 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 CLCN5P51795 746 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 RNASE9P60153 205 aaKnown RBP5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 RPL7AP62424 266 aaKnown RBP5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 CBX1P83916 185 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 TSPY1Q01534 308 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 SLC6A3Q01959 620 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 C2orf54Q08AI8 447 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 ELAVL2Q12926 359 aaKnown RBP5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 MAPRE1Q15691 268 aaKnown RBP5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 MAP9Q49MG5 647 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 EFHC1Q5JVL4 640 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 FAM102AQ5T9C2 384 aaPredicted RBP5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 CYP4A22Q5TCH4 519 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 LRRC38Q5VT99 294 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 WSCD1Q658N2 575 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 C8orf74Q6P047 294 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 WDR93Q6P2C0 686 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 TMCO3Q6UWJ1 677 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 ARCQ7LC44 396 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 TMEM110Q86TL2 294 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 OSTM1Q86WC4 334 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 TTC30AQ86WT1 665 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 KATNAL2Q8IYT4 538 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 RCOR2Q8IZ40 523 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 NIPA2Q8N8Q9 360 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 SUMF1Q8NBK3 374 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 NOA1Q8NC60 698 aaKnown RBP5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 EXD1Q8NHP7 514 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 MYCBPAPQ8TBZ2 947 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 SLC2A14Q8TDB8 520 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 TSPAN17Q96FV3 270 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 RBM41Q96IZ5 413 aaKnown RBP5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 SLC6A18Q96N87 628 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 MCEEQ96PE7 176 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 CPXM1Q96SM3 734 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 SYT15Q9BQS2 421 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 RHOXF2Q9BQY4 288 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 ACBD6Q9BR61 282 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 SSBP3Q9BWW4 388 aaPredicted RBP5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 DUSP16Q9BY84 665 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 MRPL9Q9BYD2 267 aaKnown RBP5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 PARD6BQ9BYG5 372 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 UBXN6Q9BZV1 441 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 SEMA4AQ9H3S1 761 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 DPEP3Q9H4B8 488 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 RXFP1Q9HBX9 757 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 METTL5Q9NRN9 209 aaKnown RBP5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 HOMER3Q9NSC5 361 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 FAM49BQ9NUQ9 324 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 CYTH4Q9UIA0 394 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 RAB21Q9UL25 225 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 SCN1AP35498 2009 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 ZZEF1O43149 2961 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 CCDC151A5D8V7 595 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 E5RJQ4 531 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 SYN3O14994 580 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 FGF10O15520 208 aaPredicted RBP5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 ATP8B1O43520 1251 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 EFCAB14O75071 495 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 ATP2C2O75185 946 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 DDHD2O94830 711 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 FBXO21O94952 628 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 PROS1P07225 676 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 KRT7P08729 469 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 FAM200BP0CF97 657 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 PYGMP11217 842 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 CCDC130P13994 396 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 H2AFXP16104 143 aaPredicted RBP5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 PDGFRAP16234 1089 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 ZNF16P17020 682 aaPredicted RBP5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 SP100P23497 879 aaPredicted RBP5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 ACAT1P24752 427 aaKnown RBP5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 SDC4P31431 198 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 CHRNA3P32297 505 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 RFC1P35251 1148 aaPredicted RBP5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 BRCC3P46736 316 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 RPL34P49207 117 aaKnown RBP5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 RGS7P49802 495 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 NDUFV1P49821 464 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 ZNF143P52747 638 aaPredicted RBP5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 HTRA4P83105 476 aaPredicted RBP5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 DAB2P98082 770 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 YWHAHQ04917 246 aaPredicted RBP5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 DSC1Q08554 894 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 SMC1AQ14683 1233 aaKnown RBP5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 MDH1BQ5I0G3 518 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 CLLU1OSQ5K130 101 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 PMF1Q6P1K2 205 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 BORAQ6PGQ7 559 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms