RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 NLRP14Q86W24 1093 aa7.85□□□□□ -1.15
CDC42-205ENST00000498236 KRT222Q8N1A0 295 aa7.85□□□□□ -1.15
CDC42-205ENST00000498236 NPWQ8N729 165 aa7.85□□□□□ -1.15
CDC42-205ENST00000498236 NAT8LQ8N9F0 302 aa7.85□□□□□ -1.15
CDC42-205ENST00000498236 HTR3CQ8WXA8 447 aa7.85□□□□□ -1.15
CDC42-205ENST00000498236 CPT1BQ92523 772 aa7.85□□□□□ -1.15
CDC42-205ENST00000498236 PRCCQ92733 491 aaPredicted RBP7.85□□□□□ -1.15
CDC42-205ENST00000498236 DPF3Q92784 378 aa7.85□□□□□ -1.15
CDC42-205ENST00000498236 FATE1Q969F0 183 aa7.85□□□□□ -1.15
CDC42-205ENST00000498236 HDAC11Q96DB2 347 aa7.85□□□□□ -1.15
CDC42-205ENST00000498236 TSGA13Q96PP4 275 aa7.85□□□□□ -1.15
CDC42-205ENST00000498236 VAT1Q99536 393 aa7.85□□□□□ -1.15
CDC42-205ENST00000498236 PRMT1Q99873 361 aaKnown RBP7.85□□□□□ -1.15
CDC42-205ENST00000498236 TCF25Q9BQ70 676 aa7.85□□□□□ -1.15
CDC42-205ENST00000498236 ADAM19Q9H013 955 aa7.85□□□□□ -1.15
CDC42-205ENST00000498236 MUC3BQ9H195 1237 aa7.85□□□□□ -1.15
CDC42-205ENST00000498236 EPB41L4BQ9H329 900 aa7.85□□□□□ -1.15
CDC42-205ENST00000498236 PRDM12Q9H4Q4 367 aa7.85□□□□□ -1.15
CDC42-205ENST00000498236 SRA1Q9HD15 236 aaKnown RBP7.85□□□□□ -1.15
CDC42-205ENST00000498236 TLR9Q9NR96 1032 aa7.85□□□□□ -1.15
CDC42-205ENST00000498236 NUDT5Q9UKK9 219 aa7.85□□□□□ -1.15
CDC42-205ENST00000498236 ZMYND8Q9ULU4 1186 aaPredicted RBP7.85□□□□□ -1.15
CDC42-205ENST00000498236 MAGED2Q9UNF1 606 aaPredicted RBP7.85□□□□□ -1.15
CDC42-205ENST00000498236 MFHAS1Q9Y4C4 1052 aa7.85□□□□□ -1.15
CDC42-205ENST00000498236 PCDHGB7Q9Y5F8 929 aa7.85□□□□□ -1.15
CDC42-205ENST00000498236 NFS1Q9Y697 457 aa7.85□□□□□ -1.15
CDC42-205ENST00000498236 A0A0A0MRY4 1105 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 E7ESA3 106 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 COCHO43405 550 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 OPA1O60313 960 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 RGS9O75916 674 aaPredicted RBP7.84□□□□□ -1.15
CDC42-205ENST00000498236 FGF19O95750 216 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 LATS1O95835 1130 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 GLUD1P00367 558 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 POU2F2P09086 479 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 SRGAP2BP0DMP2 458 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 EPXP11678 715 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 VAV1P15498 845 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 TPSB2P20231 275 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 HOXA9P31269 272 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 CHKAP35790 457 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 FDFT1P37268 417 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 GARSP41250 739 aaKnown RBP7.84□□□□□ -1.15
CDC42-205ENST00000498236 VPS41P49754 854 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 NDST2P52849 883 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 ERVFC1P60507 584 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 RACK1P63244 317 aaKnown RBP7.84□□□□□ -1.15
CDC42-205ENST00000498236 CDK16Q00536 496 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 WASHC5Q12768 1159 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 SEMA5AQ13591 1074 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 AUHQ13825 339 aaKnown RBP7.84□□□□□ -1.15
CDC42-205ENST00000498236 TPSAB1Q15661 275 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 TAF12Q16514 161 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 KCTD19Q17RG1 926 aaPredicted RBP7.84□□□□□ -1.15
CDC42-205ENST00000498236 MS4A13Q5J8X5 152 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 XP32Q5T750 250 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 LRRC31Q6UY01 552 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 PPP1R21Q6ZMI0 780 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 TMEM150AQ86TG1 271 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 MIB1Q86YT6 1006 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 ARHGAP12Q8IWW6 846 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 CACTIN-AS1Q8N1I8 211 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 UMODL1-AS1Q8N2C9 162 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 RTL3Q8N8U3 475 aaKnown RBP7.84□□□□□ -1.15
CDC42-205ENST00000498236 KREMEN2Q8NCW0 462 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 MCUQ8NE86 351 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 POF1BQ8WVV4 589 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 P2RY11Q96G91 374 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 SPATA13Q96N96 652 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 ZIM3Q96PE6 472 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 RBM15Q96T37 977 aaKnown RBP eCLIP7.84□□□□□ -1.15
CDC42-205ENST00000498236 LGMNQ99538 433 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 SPOCK3Q9BQ16 436 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 TMEM109Q9BVC6 243 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 LRRC3Q9BY71 257 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 ZYG11BQ9C0D3 744 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 SIK2Q9H0K1 926 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 CLEC4MQ9H2X3 399 aaPredicted RBP7.84□□□□□ -1.15
CDC42-205ENST00000498236 C10orf88Q9H8K7 445 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 ENTPD7Q9NQZ7 604 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 EIF2B3Q9NR50 452 aaKnown RBP7.84□□□□□ -1.15
CDC42-205ENST00000498236 TMEM248Q9NWD8 314 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 XPO7Q9UIA9 1087 aaKnown RBP7.84□□□□□ -1.15
CDC42-205ENST00000498236 STOML2Q9UJZ1 356 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 TRHDEQ9UKU6 1024 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 SOX13Q9UN79 622 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 TRIM33Q9UPN9 1127 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 ATP8A1Q9Y2Q0 1164 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 PCDHA11Q9Y5I1 949 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 SNX10Q9Y5X0 201 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 NR2E3Q9Y5X4 410 aa7.84□□□□□ -1.15
CDC42-205ENST00000498236 PLXNA4Q9HCM2 1894 aa7.83□□□□□ -1.16
CDC42-205ENST00000498236 RNF103O00237 685 aa7.83□□□□□ -1.16
CDC42-205ENST00000498236 ALOX15BO15296 676 aa7.83□□□□□ -1.16
CDC42-205ENST00000498236 RIPK2O43353 540 aa7.83□□□□□ -1.16
CDC42-205ENST00000498236 TCEA3O75764 348 aa7.83□□□□□ -1.16
CDC42-205ENST00000498236 PAPLNO95428 1278 aa7.83□□□□□ -1.16
CDC42-205ENST00000498236 TTC4O95801 387 aa7.83□□□□□ -1.16
CDC42-205ENST00000498236 SYF2O95926 243 aaKnown RBP7.83□□□□□ -1.16
CDC42-205ENST00000498236 MOCS2O96007 188 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms