RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 PPP1R10Q96QC0 940 aaKnown RBP4.07□□□□□ -1.76
CD46-218ENST00000496723 HERPUD2Q9BSE4 406 aa4.07□□□□□ -1.76
CD46-218ENST00000496723 CTDSP1Q9GZU7 261 aa4.07□□□□□ -1.76
CD46-218ENST00000496723 SLCO5A1Q9H2Y9 848 aa4.07□□□□□ -1.76
CD46-218ENST00000496723 KRCC1Q9NPI7 259 aaPredicted RBP4.07□□□□□ -1.76
CD46-218ENST00000496723 ICKQ9UPZ9 632 aa4.07□□□□□ -1.76
CD46-218ENST00000496723 DHDHQ9UQ10 334 aa4.07□□□□□ -1.76
CD46-218ENST00000496723 OSGIN2Q9Y236 505 aa4.07□□□□□ -1.76
CD46-218ENST00000496723 DNAJC16Q9Y2G8 782 aa4.07□□□□□ -1.76
CD46-218ENST00000496723 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.06□□□□□ -1.76
CD46-218ENST00000496723 TARSL2A2RTX5 802 aaKnown RBP4.06□□□□□ -1.76
CD46-218ENST00000496723 SAC3D1A6NKF1 404 aa4.06□□□□□ -1.76
CD46-218ENST00000496723 C4orf47A7E2U8 309 aa4.06□□□□□ -1.76
CD46-218ENST00000496723 C17orf100A8MU93 164 aa4.06□□□□□ -1.76
CD46-218ENST00000496723 BECN2A8MW95 431 aa4.06□□□□□ -1.76
CD46-218ENST00000496723 CYP1A2P05177 515 aa4.06□□□□□ -1.76
CD46-218ENST00000496723 CHRNB2P17787 502 aa4.06□□□□□ -1.76
CD46-218ENST00000496723 ARRB2P32121 409 aa4.06□□□□□ -1.76
CD46-218ENST00000496723 MTNR1AP48039 350 aa4.06□□□□□ -1.76
CD46-218ENST00000496723 RFX2P48378 723 aa4.06□□□□□ -1.76
CD46-218ENST00000496723 ENTPD1P49961 510 aa4.06□□□□□ -1.76
CD46-218ENST00000496723 CLCNKBP51801 687 aa4.06□□□□□ -1.76
CD46-218ENST00000496723 SELENOVP59797 346 aa4.06□□□□□ -1.76
CD46-218ENST00000496723 GOLGA8FQ08AF8 430 aa4.06□□□□□ -1.76
CD46-218ENST00000496723 IL13RA2Q14627 380 aa4.06□□□□□ -1.76
CD46-218ENST00000496723 CBWD5Q5RIA9 395 aa4.06□□□□□ -1.76
CD46-218ENST00000496723 DCAF12L2Q5VW00 463 aa4.06□□□□□ -1.76
CD46-218ENST00000496723 TMEM71Q6P5X7 295 aa4.06□□□□□ -1.76
CD46-218ENST00000496723 HERC6Q8IVU3 1022 aa4.06□□□□□ -1.76
CD46-218ENST00000496723 OIT3Q8WWZ8 545 aa4.06□□□□□ -1.76
CD46-218ENST00000496723 NCSTNQ92542 709 aa4.06□□□□□ -1.76
CD46-218ENST00000496723 MASTLQ96GX5 879 aa4.06□□□□□ -1.76
CD46-218ENST00000496723 URB1-AS1Q96HZ7 61 aa4.06□□□□□ -1.76
CD46-218ENST00000496723 COG8Q96MW5 612 aa4.06□□□□□ -1.76
CD46-218ENST00000496723 TEFMQ96QE5 360 aaKnown RBP4.06□□□□□ -1.76
CD46-218ENST00000496723 ZPBPQ9BS86 351 aa4.06□□□□□ -1.76
CD46-218ENST00000496723 SF3B5Q9BWJ5 86 aaKnown RBP4.06□□□□□ -1.76
CD46-218ENST00000496723 PLAC1Q9HBJ0 212 aa4.06□□□□□ -1.76
CD46-218ENST00000496723 NCKIPSDQ9NZQ3 722 aa4.06□□□□□ -1.76
CD46-218ENST00000496723 SELENONQ9NZV5 590 aa4.06□□□□□ -1.76
CD46-218ENST00000496723 PCDHGB3Q9Y5G1 929 aa4.06□□□□□ -1.76
CD46-218ENST00000496723 OR6C68A6NDL8 312 aa4.05□□□□□ -1.76
CD46-218ENST00000496723 DDTLA6NHG4 134 aaPredicted RBP4.05□□□□□ -1.76
CD46-218ENST00000496723 LACTBL1A8MY62 500 aa4.05□□□□□ -1.76
CD46-218ENST00000496723 SPTLC2O15270 562 aa4.05□□□□□ -1.76
CD46-218ENST00000496723 RNMTO43148 476 aaKnown RBP4.05□□□□□ -1.76
CD46-218ENST00000496723 CPA1P15085 419 aa4.05□□□□□ -1.76
CD46-218ENST00000496723 ARSBP15848 533 aa4.05□□□□□ -1.76
CD46-218ENST00000496723 HOXA11P31270 313 aaPredicted RBP4.05□□□□□ -1.76
CD46-218ENST00000496723 GJC1P36383 396 aa4.05□□□□□ -1.76
CD46-218ENST00000496723 AVPR1AP37288 418 aa4.05□□□□□ -1.76
CD46-218ENST00000496723 KCNJ4P48050 445 aa4.05□□□□□ -1.76
CD46-218ENST00000496723 PPP3CCP48454 512 aa4.05□□□□□ -1.76
CD46-218ENST00000496723 PAPOLAP51003 745 aaKnown RBP4.05□□□□□ -1.76
CD46-218ENST00000496723 TRAF1Q13077 416 aa4.05□□□□□ -1.76
CD46-218ENST00000496723 DUSP6Q16828 381 aa4.05□□□□□ -1.76
CD46-218ENST00000496723 SH2D4BQ5SQS7 431 aa4.05□□□□□ -1.76
CD46-218ENST00000496723 DENND1BQ6P3S1 775 aa4.05□□□□□ -1.76
CD46-218ENST00000496723 LDHAL6AQ6ZMR3 332 aa4.05□□□□□ -1.76
CD46-218ENST00000496723 TRIM74Q86UV6 250 aa4.05□□□□□ -1.76
CD46-218ENST00000496723 TRIM73Q86UV7 250 aa4.05□□□□□ -1.76
CD46-218ENST00000496723 DCP1BQ8IZD4 617 aaKnown RBP4.05□□□□□ -1.76
CD46-218ENST00000496723 ANKRD42Q8N9B4 389 aa4.05□□□□□ -1.76
CD46-218ENST00000496723 CEP76Q8TAP6 659 aa4.05□□□□□ -1.76
CD46-218ENST00000496723 RNFT2Q96EX2 444 aa4.05□□□□□ -1.76
CD46-218ENST00000496723 ZNF333Q96JL9 665 aa4.05□□□□□ -1.76
CD46-218ENST00000496723 TMEM204Q9BSN7 226 aa4.05□□□□□ -1.76
CD46-218ENST00000496723 ISCA1Q9BUE6 129 aa4.05□□□□□ -1.76
CD46-218ENST00000496723 NOD2Q9HC29 1040 aa4.05□□□□□ -1.76
CD46-218ENST00000496723 RASSF1Q9NS23 344 aa4.05□□□□□ -1.76
CD46-218ENST00000496723 CD207Q9UJ71 328 aa4.05□□□□□ -1.76
CD46-218ENST00000496723 C17orf102A2RUQ5 167 aa4.04□□□□□ -1.76
CD46-218ENST00000496723 I6L893 689 aaPredicted RBP4.04□□□□□ -1.76
CD46-218ENST00000496723 HSPB6O14558 160 aa4.04□□□□□ -1.76
CD46-218ENST00000496723 ANP32CO43423 234 aa4.04□□□□□ -1.76
CD46-218ENST00000496723 SLC28A2O43868 658 aa4.04□□□□□ -1.76
CD46-218ENST00000496723 DHX16O60231 1041 aaKnown RBP4.04□□□□□ -1.76
CD46-218ENST00000496723 HBP1O60381 514 aa4.04□□□□□ -1.76
CD46-218ENST00000496723 RFC1P35251 1148 aaPredicted RBP4.04□□□□□ -1.76
CD46-218ENST00000496723 DPP6P42658 865 aa4.04□□□□□ -1.76
CD46-218ENST00000496723 PTPN9P43378 593 aa4.04□□□□□ -1.76
CD46-218ENST00000496723 RFX5P48382 616 aaPredicted RBP4.04□□□□□ -1.76
CD46-218ENST00000496723 ROR2Q01974 943 aaKnown RBP4.04□□□□□ -1.76
CD46-218ENST00000496723 KRTAP27-1Q3LI81 207 aa4.04□□□□□ -1.76
CD46-218ENST00000496723 FBXO47Q5MNV8 452 aa4.04□□□□□ -1.76
CD46-218ENST00000496723 OTUD1Q5VV17 481 aaPredicted RBP4.04□□□□□ -1.76
CD46-218ENST00000496723 HEPHL1Q6MZM0 1159 aa4.04□□□□□ -1.76
CD46-218ENST00000496723 PDXDC1Q6P996 788 aa4.04□□□□□ -1.76
CD46-218ENST00000496723 GJB7Q6PEY0 223 aa4.04□□□□□ -1.76
CD46-218ENST00000496723 USP43Q70EL4 1123 aa4.04□□□□□ -1.76
CD46-218ENST00000496723 SERPINA11Q86U17 422 aa4.04□□□□□ -1.76
CD46-218ENST00000496723 CADM3Q8N126 398 aa4.04□□□□□ -1.76
CD46-218ENST00000496723 B4GALNT2Q8NHY0 566 aa4.04□□□□□ -1.76
CD46-218ENST00000496723 BICD2Q8TD16 824 aa4.04□□□□□ -1.76
CD46-218ENST00000496723 MEIS3Q99687 375 aa4.04□□□□□ -1.76
CD46-218ENST00000496723 PYM1Q9BRP8 204 aaKnown RBP4.04□□□□□ -1.76
CD46-218ENST00000496723 NPLQ9BXD5 320 aaPredicted RBP4.04□□□□□ -1.76
CD46-218ENST00000496723 KLHL31Q9H511 634 aa4.04□□□□□ -1.76
CD46-218ENST00000496723 CXorf56Q9H5V9 222 aa4.04□□□□□ -1.76
CD46-218ENST00000496723 CATSPERBQ9H7T0 1116 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms