RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 RHOQP17081 205 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 NDST2P52849 883 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 ABCE1P61221 599 aaKnown RBP13.25□□□□□ -0.29
GARNL3-220ENST00000496711 IRF9Q00978 393 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 EFEMP1Q12805 493 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 GRM3Q14832 879 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 DLG2Q15700 870 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 UGP2Q16851 508 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 MS4A13Q5J8X5 152 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 WASHC2DQ5SRD0 308 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 FAM171A1Q5VUB5 890 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 RINLQ6ZS11 566 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 ZC3HC1Q86WB0 502 aaKnown RBP13.25□□□□□ -0.29
GARNL3-220ENST00000496711 CNTN4Q8IWV2 1026 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 ZNF683Q8IZ20 524 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 TTC9BQ8N6N2 239 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 ATP6V0D2Q8N8Y2 350 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 PXYLP1Q8TE99 480 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 SREK1Q8WXA9 508 aaKnown RBP13.25□□□□□ -0.29
GARNL3-220ENST00000496711 FBXO32Q969P5 355 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 RILPQ96NA2 401 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 SORT1Q99523 831 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 ZYG11BQ9C0D3 744 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 NOL6Q9H6R4 1146 aaKnown RBP13.25□□□□□ -0.29
GARNL3-220ENST00000496711 ELAC1Q9H777 363 aaKnown RBP13.25□□□□□ -0.29
GARNL3-220ENST00000496711 EBF2Q9HAK2 575 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 OLA1Q9NTK5 396 aaKnown RBP13.25□□□□□ -0.29
GARNL3-220ENST00000496711 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.25□□□□□ -0.29
GARNL3-220ENST00000496711 TMEM248Q9NWD8 314 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 NOP53Q9NZM5 478 aaKnown RBP13.25□□□□□ -0.29
GARNL3-220ENST00000496711 MID2Q9UJV3 735 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 ANKRD6Q9Y2G4 727 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.25□□□□□ -0.29
GARNL3-220ENST00000496711 FAM92AA1XBS5 289 aa13.24□□□□□ -0.29
GARNL3-220ENST00000496711 PMPCBO75439 489 aa13.24□□□□□ -0.29
GARNL3-220ENST00000496711 RTN3O95197 1032 aaPredicted RBP13.24□□□□□ -0.29
GARNL3-220ENST00000496711 CPB1P15086 417 aa13.24□□□□□ -0.29
GARNL3-220ENST00000496711 SELPP16109 830 aa13.24□□□□□ -0.29
GARNL3-220ENST00000496711 YWHAQP27348 245 aa13.24□□□□□ -0.29
GARNL3-220ENST00000496711 HARS2P49590 506 aaKnown RBP13.24□□□□□ -0.29
GARNL3-220ENST00000496711 CSRP3P50461 194 aa13.24□□□□□ -0.29
GARNL3-220ENST00000496711 ITGA9Q13797 1035 aa13.24□□□□□ -0.29
GARNL3-220ENST00000496711 MRPL58Q14197 206 aaKnown RBP13.24□□□□□ -0.29
GARNL3-220ENST00000496711 ATAD1Q8NBU5 361 aa13.24□□□□□ -0.29
GARNL3-220ENST00000496711 FATE1Q969F0 183 aa13.24□□□□□ -0.29
GARNL3-220ENST00000496711 MRGPRX2Q96LB1 330 aa13.24□□□□□ -0.29
GARNL3-220ENST00000496711 EBF4Q9BQW3 602 aa13.24□□□□□ -0.29
GARNL3-220ENST00000496711 DONSONQ9NYP3 566 aa13.24□□□□□ -0.29
GARNL3-220ENST00000496711 CLIC5Q9NZA1 410 aa13.24□□□□□ -0.29
GARNL3-220ENST00000496711 SLC39A10Q9ULF5 831 aa13.24□□□□□ -0.29
GARNL3-220ENST00000496711 TMEM114B3SHH9 223 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 ARVCFO00192 962 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 GSC2O15499 205 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 PEX11AO75192 247 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 H2AFYO75367 372 aaKnown RBP13.23□□□□□ -0.29
GARNL3-220ENST00000496711 INHAP05111 366 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 APOA4P06727 396 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 ALOX15P16050 662 aaPredicted RBP13.23□□□□□ -0.29
GARNL3-220ENST00000496711 PAMP19021 973 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 FGFR3P22607 806 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 PSEN1P49768 467 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 ALDH18A1P54886 795 aaKnown RBP13.23□□□□□ -0.29
GARNL3-220ENST00000496711 TRIP4Q15650 581 aaPredicted RBP13.23□□□□□ -0.29
GARNL3-220ENST00000496711 PSMD5Q16401 504 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 LHX8Q68G74 356 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 RAPH1Q70E73 1250 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 TFAP2DQ7Z6R9 452 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 LCA5Q86VQ0 697 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 TREML1Q86YW5 311 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 TNS4Q8IZW8 715 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 TEX9Q8N6V9 391 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 ACVR1CQ8NER5 493 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 OR6Y1Q8NGX8 325 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 SH3TC2Q8TF17 1288 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 MCUR1Q96AQ8 359 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 BTN2A3PQ96KV6 586 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 TSNARE1Q96NA8 513 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 CCDC106Q9BWC9 280 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 SLC25A51Q9H1U9 297 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 RNPEPL1Q9HAU8 725 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 NMRAL1Q9HBL8 299 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 TLR8Q9NR97 1041 aaKnown RBP13.23□□□□□ -0.29
GARNL3-220ENST00000496711 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.23□□□□□ -0.29
GARNL3-220ENST00000496711 DNAJC28Q9NX36 388 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 MARCH5Q9NX47 278 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 SORCS3Q9UPU3 1222 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 CHD5Q8TDI0 1954 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 IGLV3-10A0A075B6K4 115 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 MTMR11A4FU01 709 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 G3V2L1 256 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 VAPBO95292 243 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 PEX11BO96011 259 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 ENO1P06733 434 aaKnown RBP13.23□□□□□ -0.29
GARNL3-220ENST00000496711 ARRB2P32121 409 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 ARPP19P56211 112 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 TUBB3Q13509 450 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 HNRNPDQ14103 355 aaKnown RBP13.23□□□□□ -0.29
GARNL3-220ENST00000496711 RCN2Q14257 317 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 ARMC3Q5W041 872 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 KIAA0930Q6ICG6 404 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms