RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 RAB7BQ96AH8 199 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 PACSIN2Q9UNF0 486 aaPredicted RBP8.78□□□□□ -1
U2AF1-212ENST00000496462 STON1Q9Y6Q2 735 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 NLRC5Q86WI3 1866 aa8.77□□□□□ -1
U2AF1-212ENST00000496462 CXorf51AA0A1B0GTR3 108 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 C2orf81A6NN90 581 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 MATN3O15232 486 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 PHF2O75151 1096 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 RALBP11234 206 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 PSMD8P48556 350 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 TNK2Q07912 1038 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 SEPT6Q14141 434 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 ELAVL3Q14576 367 aaKnown RBP8.77□□□□□ -1.01
U2AF1-212ENST00000496462 TEX35Q5T0J7 233 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 Q6ZNB5 142 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 TAOK1Q7L7X3 1001 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 TTC7BQ86TV6 843 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 FAM126AQ9BYI3 521 aaPredicted RBP8.77□□□□□ -1.01
U2AF1-212ENST00000496462 BTBD1Q9H0C5 482 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 STOML2Q9UJZ1 356 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 CAPN6Q9Y6Q1 641 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 COL4A4P53420 1690 aaPredicted RBP8.77□□□□□ -1.01
U2AF1-212ENST00000496462 REV3LO60673 3130 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 RNF40O75150 1001 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 MOSPD3O75425 235 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 RNASEH2AO75792 299 aaKnown RBP8.77□□□□□ -1.01
U2AF1-212ENST00000496462 CRTAMO95727 393 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 KELP23276 732 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 CXCR5P32302 372 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 ATXN1P54253 815 aaKnown RBP8.77□□□□□ -1.01
U2AF1-212ENST00000496462 DR1Q01658 176 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 SRLQ86TD4 932 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 CIR1Q86X95 450 aaPredicted RBP8.77□□□□□ -1.01
U2AF1-212ENST00000496462 TXNDC5Q8NBS9 432 aaKnown RBP8.77□□□□□ -1.01
U2AF1-212ENST00000496462 OR2AP1Q8NGE2 309 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 HMCESQ96FZ2 354 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 AGAP3Q96P47 875 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 TUBGCP5Q96RT8 1024 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 LRRC40Q9H9A6 602 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 FAM114A2Q9NRY5 505 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 TBC1D30Q9Y2I9 924 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 COMMD10Q9Y6G5 202 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 FAM47DPA6NHR8 397 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 EFCAB8A8MWE9 144 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 AXIN1O15169 862 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 IGLV3-25P01717 112 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 KRT14P02533 472 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 PTPN7P35236 360 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 ILF2Q12905 390 aaKnown RBP8.77□□□□□ -1.01
U2AF1-212ENST00000496462 PAFAH1B3Q15102 231 aaKnown RBP8.77□□□□□ -1.01
U2AF1-212ENST00000496462 C22orf39Q6P5X5 142 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 NLRP9Q7RTR0 991 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 PPHLN1Q8NEY8 458 aaKnown RBP8.77□□□□□ -1.01
U2AF1-212ENST00000496462 RAPGEF5Q92565 580 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 CDKL2Q92772 493 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 TSSK1BQ9BXA7 367 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 TM6SF2Q9BZW4 377 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 PKD2L2Q9NZM6 624 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 TRIM10Q9UDY6 481 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 DUSP10Q9Y6W6 482 aa8.77□□□□□ -1.01
U2AF1-212ENST00000496462 FYNP06241 537 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 PHBP35232 272 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 GARSP41250 739 aaKnown RBP8.76□□□□□ -1.01
U2AF1-212ENST00000496462 VPS41P49754 854 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 GPS2Q13227 327 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 THOC5Q13769 683 aaKnown RBP8.76□□□□□ -1.01
U2AF1-212ENST00000496462 GLE1Q53GS7 698 aaKnown RBP8.76□□□□□ -1.01
U2AF1-212ENST00000496462 SH3PXD2AQ5TCZ1 1133 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 FYB2Q5VWT5 728 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 ZDHHC20Q5W0Z9 365 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 ASTLQ6HA08 431 aaPredicted RBP8.76□□□□□ -1.01
U2AF1-212ENST00000496462 BRAT1Q6PJG6 821 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 CCDC137Q6PK04 289 aaKnown RBP8.76□□□□□ -1.01
U2AF1-212ENST00000496462 C14orf80Q86SX3 495 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 GRIN3AQ8TCU5 1115 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 ACTRT1Q8TDG2 376 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 HES6Q96HZ4 224 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 TRIM7Q9C029 511 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 IL36AQ9UHA7 158 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 RAPGEFL1Q9UHV5 662 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 SLC30A1Q9Y6M5 507 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 PIEZO1Q92508 2521 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 TBC1D3DA0A087WVF3 549 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 TBC1D3IA0A087WXS9 549 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 TBC1D3EA0A087X179 549 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 TBC1D3KA0A087X1G2 549 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 TBC1D3FA6NER0 549 aaPredicted RBP8.76□□□□□ -1.01
U2AF1-212ENST00000496462 TBC1D3LB9A6J9 549 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 STX7O15400 261 aaKnown RBP8.76□□□□□ -1.01
U2AF1-212ENST00000496462 ZW10O43264 779 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 CPP00450 1065 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 TBC1D3HP0C7X1 549 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 NEK3P51956 506 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 PLK1P53350 603 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 FAM193AP78312 1265 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 PITX1P78337 314 aaPredicted RBP8.76□□□□□ -1.01
U2AF1-212ENST00000496462 OGDHQ02218 1023 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 SLC25A11Q02978 314 aaKnown RBP8.76□□□□□ -1.01
U2AF1-212ENST00000496462 MPP3Q13368 585 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 SERINC3Q13530 473 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms