RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 NLRP14Q86W24 1093 aa14.6□□□□□ -0.07
VTI1A-209ENST00000496445 FAM72BQ86X60 149 aa14.6□□□□□ -0.07
VTI1A-209ENST00000496445 PHF13Q86YI8 300 aaPredicted RBP14.6□□□□□ -0.07
VTI1A-209ENST00000496445 DRC7Q8IY82 874 aa14.6□□□□□ -0.07
VTI1A-209ENST00000496445 ANKRD20A12PQ8NF67 263 aa14.6□□□□□ -0.07
VTI1A-209ENST00000496445 FAM172AQ8WUF8 416 aa14.6□□□□□ -0.07
VTI1A-209ENST00000496445 PCMTD1Q96MG8 357 aaPredicted RBP14.6□□□□□ -0.07
VTI1A-209ENST00000496445 ELF4Q99607 663 aaPredicted RBP14.6□□□□□ -0.07
VTI1A-209ENST00000496445 TNKS2Q9H2K2 1166 aa14.6□□□□□ -0.07
VTI1A-209ENST00000496445 KDM4CQ9H3R0 1056 aa14.6□□□□□ -0.07
VTI1A-209ENST00000496445 ATP13A1Q9HD20 1204 aa14.6□□□□□ -0.07
VTI1A-209ENST00000496445 ADAM22Q9P0K1 906 aa14.6□□□□□ -0.07
VTI1A-209ENST00000496445 TPX2Q9ULW0 747 aaKnown RBP14.6□□□□□ -0.07
VTI1A-209ENST00000496445 ACTL7AQ9Y615 435 aa14.6□□□□□ -0.07
VTI1A-209ENST00000496445 TCRBV5S1A1TA0A578 114 aa14.59□□□□□ -0.07
VTI1A-209ENST00000496445 CBX4O00257 560 aa14.59□□□□□ -0.07
VTI1A-209ENST00000496445 CD160O95971 181 aa14.59□□□□□ -0.07
VTI1A-209ENST00000496445 CHRNA3P32297 505 aa14.59□□□□□ -0.07
VTI1A-209ENST00000496445 RFC1P35251 1148 aaPredicted RBP14.59□□□□□ -0.07
VTI1A-209ENST00000496445 ADRA1BP35368 520 aa14.59□□□□□ -0.07
VTI1A-209ENST00000496445 GRK6P43250 576 aa14.59□□□□□ -0.07
VTI1A-209ENST00000496445 NXPH1P58417 271 aa14.59□□□□□ -0.07
VTI1A-209ENST00000496445 GNA12Q03113 381 aa14.59□□□□□ -0.07
VTI1A-209ENST00000496445 GATAD2AQ86YP4 633 aa14.59□□□□□ -0.07
VTI1A-209ENST00000496445 C3orf20Q8ND61 904 aa14.59□□□□□ -0.07
VTI1A-209ENST00000496445 TMIEQ8NEW7 156 aa14.59□□□□□ -0.07
VTI1A-209ENST00000496445 GRIN3AQ8TCU5 1115 aa14.59□□□□□ -0.07
VTI1A-209ENST00000496445 CDC6Q99741 560 aa14.59□□□□□ -0.07
VTI1A-209ENST00000496445 OSBPL2Q9H1P3 480 aa14.59□□□□□ -0.07
VTI1A-209ENST00000496445 OR12D3Q9UGF7 316 aa14.59□□□□□ -0.07
VTI1A-209ENST00000496445 APOBEC2Q9Y235 224 aaKnown RBP14.59□□□□□ -0.07
VTI1A-209ENST00000496445 WASF2Q9Y6W5 498 aa14.59□□□□□ -0.07
VTI1A-209ENST00000496445 TMEM8BA6NDV4 472 aa14.58□□□□□ -0.08
VTI1A-209ENST00000496445 TLR4O00206 839 aa14.58□□□□□ -0.08
VTI1A-209ENST00000496445 KPNA3O00505 521 aaPredicted RBP14.58□□□□□ -0.08
VTI1A-209ENST00000496445 CCP110O43303 1012 aa14.58□□□□□ -0.08
VTI1A-209ENST00000496445 LRIG2O94898 1065 aa14.58□□□□□ -0.08
VTI1A-209ENST00000496445 CALB1P05937 261 aa14.58□□□□□ -0.08
VTI1A-209ENST00000496445 KRT3P12035 628 aa14.58□□□□□ -0.08
VTI1A-209ENST00000496445 CDK11BP21127 795 aaKnown RBP14.58□□□□□ -0.08
VTI1A-209ENST00000496445 GPD1P21695 349 aa14.58□□□□□ -0.08
VTI1A-209ENST00000496445 ACVRL1P37023 503 aa14.58□□□□□ -0.08
VTI1A-209ENST00000496445 ANO6Q4KMQ2 910 aa14.58□□□□□ -0.08
VTI1A-209ENST00000496445 WDR59Q6PJI9 974 aa14.58□□□□□ -0.08
VTI1A-209ENST00000496445 DPY19L3Q6ZPD9 716 aa14.58□□□□□ -0.08
VTI1A-209ENST00000496445 SPATS2Q86XZ4 545 aaKnown RBP14.58□□□□□ -0.08
VTI1A-209ENST00000496445 SAP25Q8TEE9 199 aa14.58□□□□□ -0.08
VTI1A-209ENST00000496445 ZCCHC14Q8WYQ9 949 aaKnown RBP14.58□□□□□ -0.08
VTI1A-209ENST00000496445 CCDC114Q96M63 670 aa14.58□□□□□ -0.08
VTI1A-209ENST00000496445 AGPAT1Q99943 283 aa14.58□□□□□ -0.08
VTI1A-209ENST00000496445 SPON2Q9BUD6 331 aa14.58□□□□□ -0.08
VTI1A-209ENST00000496445 CEP44Q9C0F1 390 aa14.58□□□□□ -0.08
VTI1A-209ENST00000496445 PREBQ9HCU5 417 aa14.58□□□□□ -0.08
VTI1A-209ENST00000496445 GDF3Q9NR23 364 aa14.58□□□□□ -0.08
VTI1A-209ENST00000496445 IL36AQ9UHA7 158 aa14.58□□□□□ -0.08
VTI1A-209ENST00000496445 CA5BQ9Y2D0 317 aa14.58□□□□□ -0.08
VTI1A-209ENST00000496445 FCF1Q9Y324 198 aaKnown RBP14.58□□□□□ -0.08
VTI1A-209ENST00000496445 ZFYVE26Q68DK2 2539 aa14.57□□□□□ -0.08
VTI1A-209ENST00000496445 TEX33O43247 280 aa14.57□□□□□ -0.08
VTI1A-209ENST00000496445 DFNA5O60443 496 aa14.57□□□□□ -0.08
VTI1A-209ENST00000496445 RNGTTO60942 597 aaKnown RBP14.57□□□□□ -0.08
VTI1A-209ENST00000496445 LEFTY1O75610 366 aa14.57□□□□□ -0.08
VTI1A-209ENST00000496445 PRNPP04156 253 aa14.57□□□□□ -0.08
VTI1A-209ENST00000496445 CAPNS1P04632 268 aa14.57□□□□□ -0.08
VTI1A-209ENST00000496445 RHOQP17081 205 aa14.57□□□□□ -0.08
VTI1A-209ENST00000496445 EPHA8P29322 1005 aaPredicted RBP14.57□□□□□ -0.08
VTI1A-209ENST00000496445 MAPKAPK2P49137 400 aa14.57□□□□□ -0.08
VTI1A-209ENST00000496445 SCAPQ12770 1279 aa14.57□□□□□ -0.08
VTI1A-209ENST00000496445 ARL13BQ3SXY8 428 aa14.57□□□□□ -0.08
VTI1A-209ENST00000496445 PPP1R15BQ5SWA1 713 aa14.57□□□□□ -0.08
VTI1A-209ENST00000496445 RETSATQ6NUM9 610 aa14.57□□□□□ -0.08
VTI1A-209ENST00000496445 PRPF39Q86UA1 669 aaKnown RBP14.57□□□□□ -0.08
VTI1A-209ENST00000496445 PYROXD2Q8N2H3 581 aa14.57□□□□□ -0.08
VTI1A-209ENST00000496445 TMEM145Q8NBT3 493 aa14.57□□□□□ -0.08
VTI1A-209ENST00000496445 BAP1Q92560 729 aa14.57□□□□□ -0.08
VTI1A-209ENST00000496445 NTAN1Q96AB6 310 aa14.57□□□□□ -0.08
VTI1A-209ENST00000496445 VOPP1Q96AW1 172 aa14.57□□□□□ -0.08
VTI1A-209ENST00000496445 SKA1Q96BD8 255 aa14.57□□□□□ -0.08
VTI1A-209ENST00000496445 TBC1D31Q96DN5 1066 aa14.57□□□□□ -0.08
VTI1A-209ENST00000496445 SYT11Q9BT88 431 aa14.57□□□□□ -0.08
VTI1A-209ENST00000496445 SELENOOQ9BVL4 669 aa14.57□□□□□ -0.08
VTI1A-209ENST00000496445 SEPT11Q9NVA2 429 aaKnown RBP14.57□□□□□ -0.08
VTI1A-209ENST00000496445 TMEM248Q9NWD8 314 aa14.57□□□□□ -0.08
VTI1A-209ENST00000496445 DNAI1Q9UI46 699 aa14.57□□□□□ -0.08
VTI1A-209ENST00000496445 DMTF1Q9Y222 760 aa14.57□□□□□ -0.08
VTI1A-209ENST00000496445 FARP1Q9Y4F1 1045 aaPredicted RBP14.57□□□□□ -0.08
VTI1A-209ENST00000496445 TRPM6Q9BX84 2022 aa14.57□□□□□ -0.08
VTI1A-209ENST00000496445 ARID1BQ8NFD5 2236 aaPredicted RBP14.57□□□□□ -0.08
VTI1A-209ENST00000496445 A0A1W2PQU0 124 aa14.56□□□□□ -0.08
VTI1A-209ENST00000496445 SIGLEC16A6NMB1 481 aa14.56□□□□□ -0.08
VTI1A-209ENST00000496445 GOLGA8CPA6NN73 597 aa14.56□□□□□ -0.08
VTI1A-209ENST00000496445 TNFSF14O43557 240 aa14.56□□□□□ -0.08
VTI1A-209ENST00000496445 PLEKP08567 350 aaPredicted RBP14.56□□□□□ -0.08
VTI1A-209ENST00000496445 NUDT1P36639 197 aa14.56□□□□□ -0.08
VTI1A-209ENST00000496445 CCNHP51946 323 aaPredicted RBP14.56□□□□□ -0.08
VTI1A-209ENST00000496445 RPL7AP62424 266 aaKnown RBP14.56□□□□□ -0.08
VTI1A-209ENST00000496445 SETMARQ53H47 684 aaPredicted RBP14.56□□□□□ -0.08
VTI1A-209ENST00000496445 SLC45A4Q5BKX6 768 aa14.56□□□□□ -0.08
VTI1A-209ENST00000496445 ARSIQ5FYB1 569 aa14.56□□□□□ -0.08
VTI1A-209ENST00000496445 RWDD4Q6NW29 188 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms