RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 LAYNQ6UX15 382 aa14.78□□□□□ -0.04
PDAP1-204ENST00000496335 DPY19L3Q6ZPD9 716 aa14.78□□□□□ -0.04
PDAP1-204ENST00000496335 TBC1D3Q8IZP1 549 aaPredicted RBP14.78□□□□□ -0.04
PDAP1-204ENST00000496335 RTL3Q8N8U3 475 aaKnown RBP14.78□□□□□ -0.04
PDAP1-204ENST00000496335 FAM131CQ96AQ9 280 aa14.78□□□□□ -0.04
PDAP1-204ENST00000496335 IQCDQ96DY2 449 aa14.78□□□□□ -0.04
PDAP1-204ENST00000496335 PEBP4Q96S96 227 aa14.78□□□□□ -0.04
PDAP1-204ENST00000496335 EPAS1Q99814 870 aa14.78□□□□□ -0.04
PDAP1-204ENST00000496335 RETREG1Q9H6L5 497 aa14.78□□□□□ -0.04
PDAP1-204ENST00000496335 NOL6Q9H6R4 1146 aaKnown RBP14.78□□□□□ -0.04
PDAP1-204ENST00000496335 ARHGAP20Q9P2F6 1191 aa14.78□□□□□ -0.04
PDAP1-204ENST00000496335 FARP1Q9Y4F1 1045 aaPredicted RBP14.78□□□□□ -0.04
PDAP1-204ENST00000496335 SCINQ9Y6U3 715 aa14.78□□□□□ -0.04
PDAP1-204ENST00000496335 TP53BP1Q12888 1972 aaPredicted RBP14.78□□□□□ -0.04
PDAP1-204ENST00000496335 A0A1W2PPC4 97 aa14.77□□□□□ -0.05
PDAP1-204ENST00000496335 C10orf142B7Z368 130 aa14.77□□□□□ -0.05
PDAP1-204ENST00000496335 KPNA3O00505 521 aaPredicted RBP14.77□□□□□ -0.05
PDAP1-204ENST00000496335 OPHN1O60890 802 aa14.77□□□□□ -0.05
PDAP1-204ENST00000496335 RNF8O76064 485 aa14.77□□□□□ -0.05
PDAP1-204ENST00000496335 TPM3P06753 285 aa14.77□□□□□ -0.05
PDAP1-204ENST00000496335 MYBL1P10243 752 aa14.77□□□□□ -0.05
PDAP1-204ENST00000496335 MIPP30301 263 aa14.77□□□□□ -0.05
PDAP1-204ENST00000496335 ETFBP38117 255 aa14.77□□□□□ -0.05
PDAP1-204ENST00000496335 RECQLP46063 649 aaPredicted RBP14.77□□□□□ -0.05
PDAP1-204ENST00000496335 AFF3P51826 1226 aaKnown RBP14.77□□□□□ -0.05
PDAP1-204ENST00000496335 PPP2CBP62714 309 aa14.77□□□□□ -0.05
PDAP1-204ENST00000496335 PPP2CAP67775 309 aa14.77□□□□□ -0.05
PDAP1-204ENST00000496335 ARSIQ5FYB1 569 aa14.77□□□□□ -0.05
PDAP1-204ENST00000496335 N4BP2L1Q5TBK1 243 aaPredicted RBP14.77□□□□□ -0.05
PDAP1-204ENST00000496335 AGBL4Q5VU57 503 aa14.77□□□□□ -0.05
PDAP1-204ENST00000496335 CYP4V2Q6ZWL3 525 aaPredicted RBP14.77□□□□□ -0.05
PDAP1-204ENST00000496335 VPS36Q86VN1 386 aa14.77□□□□□ -0.05
PDAP1-204ENST00000496335 ZNF354CQ86Y25 554 aa14.77□□□□□ -0.05
PDAP1-204ENST00000496335 DEFB124Q8NES8 71 aa14.77□□□□□ -0.05
PDAP1-204ENST00000496335 TMIEQ8NEW7 156 aa14.77□□□□□ -0.05
PDAP1-204ENST00000496335 GRIN3AQ8TCU5 1115 aa14.77□□□□□ -0.05
PDAP1-204ENST00000496335 FNIP1Q8TF40 1166 aa14.77□□□□□ -0.05
PDAP1-204ENST00000496335 ARRDC3Q96B67 414 aa14.77□□□□□ -0.05
PDAP1-204ENST00000496335 TRIM11Q96F44 468 aa14.77□□□□□ -0.05
PDAP1-204ENST00000496335 CCDC114Q96M63 670 aa14.77□□□□□ -0.05
PDAP1-204ENST00000496335 SNRNP25Q9BV90 132 aaKnown RBP14.77□□□□□ -0.05
PDAP1-204ENST00000496335 TM6SF2Q9BZW4 377 aa14.77□□□□□ -0.05
PDAP1-204ENST00000496335 KLC2Q9H0B6 622 aa14.77□□□□□ -0.05
PDAP1-204ENST00000496335 THAP2Q9H0W7 228 aa14.77□□□□□ -0.05
PDAP1-204ENST00000496335 DHX35Q9H5Z1 703 aaKnown RBP14.77□□□□□ -0.05
PDAP1-204ENST00000496335 IL21RQ9HBE5 538 aa14.77□□□□□ -0.05
PDAP1-204ENST00000496335 MRPL47Q9HD33 250 aaKnown RBP14.77□□□□□ -0.05
PDAP1-204ENST00000496335 DNAAF2Q9NVR5 837 aaKnown RBP14.77□□□□□ -0.05
PDAP1-204ENST00000496335 AP4E1Q9UPM8 1137 aa14.77□□□□□ -0.05
PDAP1-204ENST00000496335 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.77□□□□□ -0.059e-15■■■□□ 18.5
PDAP1-204ENST00000496335 TPRP12270 2363 aaKnown RBP14.77□□□□□ -0.05
PDAP1-204ENST00000496335 WNT9AO14904 365 aa14.76□□□□□ -0.05
PDAP1-204ENST00000496335 CBFA2T2O43439 604 aa14.76□□□□□ -0.05
PDAP1-204ENST00000496335 PLRG1O43660 514 aaKnown RBP14.76□□□□□ -0.05
PDAP1-204ENST00000496335 KDELR3O43731 214 aa14.76□□□□□ -0.05
PDAP1-204ENST00000496335 LRCH4O75427 683 aa14.76□□□□□ -0.05
PDAP1-204ENST00000496335 LEFTY1O75610 366 aa14.76□□□□□ -0.05
PDAP1-204ENST00000496335 GJB3O75712 270 aa14.76□□□□□ -0.05
PDAP1-204ENST00000496335 ADRB1P08588 477 aa14.76□□□□□ -0.05
PDAP1-204ENST00000496335 CCR5P51681 352 aa14.76□□□□□ -0.05
PDAP1-204ENST00000496335 TPI1P60174 286 aa14.76□□□□□ -0.05
PDAP1-204ENST00000496335 CARD16Q5EG05 197 aa14.76□□□□□ -0.05
PDAP1-204ENST00000496335 KCNT1Q5JUK3 1230 aa14.76□□□□□ -0.05
PDAP1-204ENST00000496335 ERMARDQ5T6L9 678 aa14.76□□□□□ -0.05
PDAP1-204ENST00000496335 PCDH20Q8N6Y1 951 aaKnown RBP14.76□□□□□ -0.05
PDAP1-204ENST00000496335 NETO2Q8NC67 525 aa14.76□□□□□ -0.05
PDAP1-204ENST00000496335 SLC6A18Q96N87 628 aa14.76□□□□□ -0.05
PDAP1-204ENST00000496335 KCTD15Q96SI1 283 aaPredicted RBP14.76□□□□□ -0.05
PDAP1-204ENST00000496335 ZDHHC5Q9C0B5 715 aa14.76□□□□□ -0.05
PDAP1-204ENST00000496335 CEP44Q9C0F1 390 aa14.76□□□□□ -0.05
PDAP1-204ENST00000496335 GAREM1Q9H706 876 aa14.76□□□□□ -0.05
PDAP1-204ENST00000496335 OSGEPQ9NPF4 335 aa14.76□□□□□ -0.05
PDAP1-204ENST00000496335 IL36AQ9UHA7 158 aa14.76□□□□□ -0.05
PDAP1-204ENST00000496335 HPCAL4Q9UM19 191 aa14.76□□□□□ -0.05
PDAP1-204ENST00000496335 WASF2Q9Y6W5 498 aa14.76□□□□□ -0.05
PDAP1-204ENST00000496335 TRPM6Q9BX84 2022 aa14.75□□□□□ -0.05
PDAP1-204ENST00000496335 WASH4PA8MWX3 477 aa14.75□□□□□ -0.05
PDAP1-204ENST00000496335 RASA4BC9J798 803 aa14.75□□□□□ -0.05
PDAP1-204ENST00000496335 KCNK3O14649 394 aa14.75□□□□□ -0.05
PDAP1-204ENST00000496335 SLC7A4O43246 635 aa14.75□□□□□ -0.05
PDAP1-204ENST00000496335 RASA4O43374 803 aa14.75□□□□□ -0.05
PDAP1-204ENST00000496335 BUB1O43683 1085 aa14.75□□□□□ -0.05
PDAP1-204ENST00000496335 PRPSAP2O60256 369 aa14.75□□□□□ -0.05
PDAP1-204ENST00000496335 PRNPP04156 253 aa14.75□□□□□ -0.05
PDAP1-204ENST00000496335 CD59P13987 128 aa14.75□□□□□ -0.05
PDAP1-204ENST00000496335 TCF4P15884 667 aa14.75□□□□□ -0.05
PDAP1-204ENST00000496335 CSRP1P21291 193 aaKnown RBP14.75□□□□□ -0.05
PDAP1-204ENST00000496335 MAT2AP31153 395 aaKnown RBP14.75□□□□□ -0.05
PDAP1-204ENST00000496335 HNRNPH3P31942 346 aaKnown RBP14.75□□□□□ -0.05
PDAP1-204ENST00000496335 GKP32189 559 aa14.75□□□□□ -0.05
PDAP1-204ENST00000496335 EIF4A3P38919 411 aaKnown RBP14.75□□□□□ -0.05
PDAP1-204ENST00000496335 GRIA4P48058 902 aa14.75□□□□□ -0.05
PDAP1-204ENST00000496335 CCNHP51946 323 aaPredicted RBP14.75□□□□□ -0.05
PDAP1-204ENST00000496335 TAS2R38P59533 333 aa14.75□□□□□ -0.05
PDAP1-204ENST00000496335 TEAD4Q15561 434 aa14.75□□□□□ -0.05
PDAP1-204ENST00000496335 KIF19Q2TAC6 998 aa14.75□□□□□ -0.05
PDAP1-204ENST00000496335 HLA-BQ31612 363 aa14.75□□□□□ -0.05
PDAP1-204ENST00000496335 CCDC122Q5T0U0 273 aa14.75□□□□□ -0.05
PDAP1-204ENST00000496335 PIP5KL1Q5T9C9 394 aa14.75□□□□□ -0.05
PDAP1-204ENST00000496335 SPECC1LQ69YQ0 1117 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms