RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 RAB6CQ9H0N0 254 aa13.02□□□□□ -0.33
PTPRF-214ENST00000496043 HSD3B7Q9H2F3 369 aa13.02□□□□□ -0.33
PTPRF-214ENST00000496043 TNKS2Q9H2K2 1166 aa13.02□□□□□ -0.33
PTPRF-214ENST00000496043 ERVMER34-1Q9H9K5 563 aa13.02□□□□□ -0.33
PTPRF-214ENST00000496043 ZNF212Q9UDV6 495 aa13.02□□□□□ -0.33
PTPRF-214ENST00000496043 IL36AQ9UHA7 158 aa13.02□□□□□ -0.33
PTPRF-214ENST00000496043 HPCAL4Q9UM19 191 aa13.02□□□□□ -0.33
PTPRF-214ENST00000496043 BTBD3Q9Y2F9 522 aa13.02□□□□□ -0.33
PTPRF-214ENST00000496043 CXorf51AA0A1B0GTR3 108 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 GOLGA8CPA6NN73 597 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 PRAMEF26H0Y7S4 382 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 RNGTTO60942 597 aaKnown RBP13.01□□□□□ -0.33
PTPRF-214ENST00000496043 ATXN1LP0C7T5 689 aaKnown RBP13.01□□□□□ -0.33
PTPRF-214ENST00000496043 ATP1A3P13637 1013 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 MAPKAPK2P49137 400 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 ARRB1P49407 418 aaPredicted RBP13.01□□□□□ -0.33
PTPRF-214ENST00000496043 HDAC4P56524 1084 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 NXPH1P58417 271 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 IL9RQ01113 521 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 OVGP1Q12889 678 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 ANO6Q4KMQ2 910 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 FILIP1LQ4L180 1135 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 SETMARQ53H47 684 aaPredicted RBP13.01□□□□□ -0.33
PTPRF-214ENST00000496043 CARD16Q5EG05 197 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 MANEALQ5VSG8 457 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 ACAD10Q6JQN1 1059 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 SCYL2Q6P3W7 929 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 C22orf39Q6P5X5 142 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 DPY19L3Q6ZPD9 716 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 ERN2Q76MJ5 926 aaKnown RBP13.01□□□□□ -0.33
PTPRF-214ENST00000496043 SLFN11Q7Z7L1 901 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 OXR1Q8N573 874 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 PCDH20Q8N6Y1 951 aaKnown RBP13.01□□□□□ -0.33
PTPRF-214ENST00000496043 NTAN1Q96AB6 310 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 ARRDC3Q96B67 414 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 TBC1D31Q96DN5 1066 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 PPP1R16AQ96I34 528 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 BPIFA3Q9BQP9 254 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 HEPHQ9BQS7 1158 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 HDAC8Q9BY41 377 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 MAGEB5Q9BZ81 275 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 MAGEH1Q9H213 219 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 TMEM248Q9NWD8 314 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 TMEM63CQ9P1W3 806 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 DNAI1Q9UI46 699 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 ZMIZ1Q9ULJ6 1067 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 MYO6Q9UM54 1294 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 EPG5Q9HCE0 2579 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 CHD8Q9HCK8 2581 aa13.01□□□□□ -0.33
PTPRF-214ENST00000496043 CACNA1BQ00975 2339 aa13□□□□□ -0.33
PTPRF-214ENST00000496043 FAM72CH0Y354 149 aa13□□□□□ -0.33
PTPRF-214ENST00000496043 TEX33O43247 280 aa13□□□□□ -0.33
PTPRF-214ENST00000496043 ZNF821O75541 412 aaPredicted RBP13□□□□□ -0.33
PTPRF-214ENST00000496043 LEFTY1O75610 366 aa13□□□□□ -0.33
PTPRF-214ENST00000496043 LRIG2O94898 1065 aa13□□□□□ -0.33
PTPRF-214ENST00000496043 PCDH8O95206 1070 aa13□□□□□ -0.33
PTPRF-214ENST00000496043 DESP17661 470 aa13□□□□□ -0.33
PTPRF-214ENST00000496043 ACVRL1P37023 503 aa13□□□□□ -0.33
PTPRF-214ENST00000496043 RXRGP48443 463 aa13□□□□□ -0.33
PTPRF-214ENST00000496043 SERPINH1P50454 418 aaKnown RBP13□□□□□ -0.33
PTPRF-214ENST00000496043 ZNF143P52747 638 aaPredicted RBP13□□□□□ -0.33
PTPRF-214ENST00000496043 GEMIN4P57678 1058 aaKnown RBP13□□□□□ -0.33
PTPRF-214ENST00000496043 TAS2R38P59533 333 aa13□□□□□ -0.33
PTPRF-214ENST00000496043 POLD3Q15054 466 aaPredicted RBP13□□□□□ -0.33
PTPRF-214ENST00000496043 PIP5KL1Q5T9C9 394 aa13□□□□□ -0.33
PTPRF-214ENST00000496043 FAM72AQ5TYM5 149 aa13□□□□□ -0.33
PTPRF-214ENST00000496043 FAM72DQ6L9T8 149 aa13□□□□□ -0.33
PTPRF-214ENST00000496043 PPP1R2P3Q6NXS1 205 aa13□□□□□ -0.33
PTPRF-214ENST00000496043 DNAJC24Q6P3W2 148 aa13□□□□□ -0.33
PTPRF-214ENST00000496043 CCNI2Q6ZMN8 369 aaPredicted RBP13□□□□□ -0.33
PTPRF-214ENST00000496043 MON1BQ7L1V2 547 aa13□□□□□ -0.33
PTPRF-214ENST00000496043 IRF2BP2Q7Z5L9 587 aa13□□□□□ -0.33
PTPRF-214ENST00000496043 NLRP14Q86W24 1093 aa13□□□□□ -0.33
PTPRF-214ENST00000496043 HORMAD1Q86X24 394 aa13□□□□□ -0.33
PTPRF-214ENST00000496043 FAM72BQ86X60 149 aa13□□□□□ -0.33
PTPRF-214ENST00000496043 GATAD2AQ86YP4 633 aa13□□□□□ -0.33
PTPRF-214ENST00000496043 PLPP6Q8IY26 295 aa13□□□□□ -0.33
PTPRF-214ENST00000496043 MCOLN2Q8IZK6 566 aa13□□□□□ -0.33
PTPRF-214ENST00000496043 CCDC185Q8N715 623 aa13□□□□□ -0.33
PTPRF-214ENST00000496043 SAP25Q8TEE9 199 aa13□□□□□ -0.33
PTPRF-214ENST00000496043 ARHGEF2Q92974 986 aaKnown RBP13□□□□□ -0.33
PTPRF-214ENST00000496043 ISG20Q96AZ6 181 aaKnown RBP13□□□□□ -0.33
PTPRF-214ENST00000496043 KLHDC7BQ96G42 594 aa13□□□□□ -0.33
PTPRF-214ENST00000496043 RTN4Q9NQC3 1192 aaKnown RBP13□□□□□ -0.33
PTPRF-214ENST00000496043 CABIN1Q9Y6J0 2220 aa13□□□□□ -0.33
PTPRF-214ENST00000496043 A0A1W2PQU0 124 aa12.99□□□□□ -0.33
PTPRF-214ENST00000496043 TCRBV5S1A1TA0A578 114 aa12.99□□□□□ -0.33
PTPRF-214ENST00000496043 SLC31A1O15431 190 aa12.99□□□□□ -0.33
PTPRF-214ENST00000496043 RAMP2O60895 175 aa12.99□□□□□ -0.33
PTPRF-214ENST00000496043 DKK1O94907 266 aa12.99□□□□□ -0.33
PTPRF-214ENST00000496043 LDOC1O95751 146 aaPredicted RBP12.99□□□□□ -0.33
PTPRF-214ENST00000496043 L1CAMP32004 1257 aa12.99□□□□□ -0.33
PTPRF-214ENST00000496043 ARF5P84085 180 aa12.99□□□□□ -0.33
PTPRF-214ENST00000496043 BNIP3Q12983 259 aa12.99□□□□□ -0.33
PTPRF-214ENST00000496043 SHBQ15464 509 aa12.99□□□□□ -0.33
PTPRF-214ENST00000496043 EFHC2Q5JST6 749 aa12.99□□□□□ -0.33
PTPRF-214ENST00000496043 FBXL19Q6PCT2 694 aa12.99□□□□□ -0.33
PTPRF-214ENST00000496043 DCUN1D2Q6PH85 259 aa12.99□□□□□ -0.33
PTPRF-214ENST00000496043 TMPRSS7Q7RTY8 843 aa12.99□□□□□ -0.33
PTPRF-214ENST00000496043 SPATS2Q86XZ4 545 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms