RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 PLPP6Q8IY26 295 aa20.42■□□□□ 0.86
LMO4-204ENST00000495705 RNF25Q96BH1 459 aaPredicted RBP20.42■□□□□ 0.86
LMO4-204ENST00000495705 FAM129BQ96TA1 746 aa20.42■□□□□ 0.86
LMO4-204ENST00000495705 MAK16Q9BXY0 300 aaKnown RBP20.42■□□□□ 0.86
LMO4-204ENST00000495705 ITM2CQ9NQX7 267 aa20.42■□□□□ 0.86
LMO4-204ENST00000495705 USP36Q9P275 1121 aaKnown RBP20.42■□□□□ 0.86
LMO4-204ENST00000495705 IPO11Q9UI26 975 aaKnown RBP20.42■□□□□ 0.86
LMO4-204ENST00000495705 AMFRQ9UKV5 643 aa20.42■□□□□ 0.86
LMO4-204ENST00000495705 GUCA1BQ9UMX6 200 aa20.42■□□□□ 0.86
LMO4-204ENST00000495705 PCDHA3Q9Y5H8 950 aa20.42■□□□□ 0.86
LMO4-204ENST00000495705 MFSD11O43934 449 aa20.41■□□□□ 0.86
LMO4-204ENST00000495705 BNIP3LO60238 219 aa20.41■□□□□ 0.86
LMO4-204ENST00000495705 PALMO75781 387 aa20.41■□□□□ 0.86
LMO4-204ENST00000495705 TMCC1O94876 653 aa20.41■□□□□ 0.86
LMO4-204ENST00000495705 ZRANB2O95218 330 aaKnown RBP eCLIP20.41■□□□□ 0.86
LMO4-204ENST00000495705 ZFXP17010 805 aaPredicted RBP20.41■□□□□ 0.86
LMO4-204ENST00000495705 SRSF5Q13243 272 aaKnown RBP20.41■□□□□ 0.86
LMO4-204ENST00000495705 CST6Q15828 149 aa20.41■□□□□ 0.86
LMO4-204ENST00000495705 MFSD7Q6UXD7 560 aa20.41■□□□□ 0.86
LMO4-204ENST00000495705 PEX26Q7Z412 305 aa20.41■□□□□ 0.86
LMO4-204ENST00000495705 MMAAQ8IVH4 418 aaKnown RBP20.41■□□□□ 0.86
LMO4-204ENST00000495705 ATPAF2Q8N5M1 289 aa20.41■□□□□ 0.86
LMO4-204ENST00000495705 PQLC3Q8N755 202 aa20.41■□□□□ 0.86
LMO4-204ENST00000495705 OR2A12Q8NGT7 310 aa20.41■□□□□ 0.86
LMO4-204ENST00000495705 EXD1Q8NHP7 514 aa20.41■□□□□ 0.86
LMO4-204ENST00000495705 UBE2Q2Q8WVN8 375 aa20.41■□□□□ 0.86
LMO4-204ENST00000495705 RLN3Q8WXF3 142 aa20.41■□□□□ 0.86
LMO4-204ENST00000495705 ZNF599Q96NL3 588 aa20.41■□□□□ 0.86
LMO4-204ENST00000495705 TNKS2Q9H2K2 1166 aa20.41■□□□□ 0.86
LMO4-204ENST00000495705 RAB23Q9ULC3 237 aa20.41■□□□□ 0.86
LMO4-204ENST00000495705 CYP8B1Q9UNU6 501 aa20.41■□□□□ 0.86
LMO4-204ENST00000495705 ACTL7AQ9Y615 435 aa20.41■□□□□ 0.86
LMO4-204ENST00000495705 MIF4GDA9UHW6 222 aaKnown RBP20.4■□□□□ 0.86
LMO4-204ENST00000495705 C1QTNF3-AMACRE9PGA6 284 aa20.4■□□□□ 0.86
LMO4-204ENST00000495705 J3KR12 359 aa20.4■□□□□ 0.86
LMO4-204ENST00000495705 APOL1O14791 398 aa20.4■□□□□ 0.86
LMO4-204ENST00000495705 ZNF821O75541 412 aaPredicted RBP20.4■□□□□ 0.86
LMO4-204ENST00000495705 GSRP00390 522 aa20.4■□□□□ 0.86
LMO4-204ENST00000495705 IL1BP01584 269 aa20.4■□□□□ 0.86
LMO4-204ENST00000495705 IGLV3-19P01714 112 aa20.4■□□□□ 0.86
LMO4-204ENST00000495705 OXTRP30559 389 aa20.4■□□□□ 0.86
LMO4-204ENST00000495705 MARCKSL1P49006 195 aa20.4■□□□□ 0.86
LMO4-204ENST00000495705 TPMTP51580 245 aa20.4■□□□□ 0.86
LMO4-204ENST00000495705 SNRPD1P62314 119 aaKnown RBP20.4■□□□□ 0.86
LMO4-204ENST00000495705 RFTN1Q14699 578 aaPredicted RBP20.4■□□□□ 0.86
LMO4-204ENST00000495705 CARD16Q5EG05 197 aa20.4■□□□□ 0.86
LMO4-204ENST00000495705 FAM46CQ5VWP2 391 aa20.4■□□□□ 0.86
LMO4-204ENST00000495705 SLC9A4Q6AI14 798 aa20.4■□□□□ 0.86
LMO4-204ENST00000495705 SLC36A4Q6YBV0 504 aa20.4■□□□□ 0.86
LMO4-204ENST00000495705 LEKR1Q6ZMV7 388 aa20.4■□□□□ 0.86
LMO4-204ENST00000495705 SPOCD1Q6ZMY3 1216 aa20.4■□□□□ 0.86
LMO4-204ENST00000495705 PRR23BQ6ZRT6 265 aa20.4■□□□□ 0.86
LMO4-204ENST00000495705 NT5DC3Q86UY8 548 aa20.4■□□□□ 0.86
LMO4-204ENST00000495705 RCOR2Q8IZ40 523 aa20.4■□□□□ 0.86
LMO4-204ENST00000495705 NETO2Q8NC67 525 aa20.4■□□□□ 0.86
LMO4-204ENST00000495705 KRT35Q92764 455 aa20.4■□□□□ 0.86
LMO4-204ENST00000495705 NKD2Q969F2 451 aaPredicted RBP20.4■□□□□ 0.86
LMO4-204ENST00000495705 PABPC3Q9H361 631 aaKnown RBP20.4■□□□□ 0.86
LMO4-204ENST00000495705 SMG5Q9UPR3 1016 aaKnown RBP20.4■□□□□ 0.86
LMO4-204ENST00000495705 PPP2R2CQ9Y2T4 447 aa20.4■□□□□ 0.86
LMO4-204ENST00000495705 CAPN6Q9Y6Q1 641 aa20.4■□□□□ 0.86
LMO4-204ENST00000495705 SHROOM3Q8TF72 1996 aa20.39■□□□□ 0.86
LMO4-204ENST00000495705 IGHV1OR15-9A0A0B4J2B8 117 aa20.39■□□□□ 0.85
LMO4-204ENST00000495705 PRNPP04156 253 aa20.39■□□□□ 0.85
LMO4-204ENST00000495705 MX2P20592 715 aa20.39■□□□□ 0.85
LMO4-204ENST00000495705 C5AR1P21730 350 aa20.39■□□□□ 0.85
LMO4-204ENST00000495705 CHRNA3P32297 505 aa20.39■□□□□ 0.85
LMO4-204ENST00000495705 CDKN2BP42772 138 aa20.39■□□□□ 0.85
LMO4-204ENST00000495705 PSMD8P48556 350 aa20.39■□□□□ 0.85
LMO4-204ENST00000495705 DNA2P51530 1060 aa20.39■□□□□ 0.85
LMO4-204ENST00000495705 RHOAP61586 193 aa20.39■□□□□ 0.85
LMO4-204ENST00000495705 GALNT2Q10471 571 aa20.39■□□□□ 0.85
LMO4-204ENST00000495705 TFDP2Q14188 446 aa20.39■□□□□ 0.85
LMO4-204ENST00000495705 ELF2Q15723 593 aa20.39■□□□□ 0.85
LMO4-204ENST00000495705 TAZQ16635 292 aa20.39■□□□□ 0.85
LMO4-204ENST00000495705 TFDP3Q5H9I0 405 aa20.39■□□□□ 0.85
LMO4-204ENST00000495705 TMCO4Q5TGY1 634 aa20.39■□□□□ 0.85
LMO4-204ENST00000495705 DPY19L3Q6ZPD9 716 aa20.39■□□□□ 0.85
LMO4-204ENST00000495705 ARHGAP36Q6ZRI8 547 aa20.39■□□□□ 0.85
LMO4-204ENST00000495705 USP30Q70CQ3 517 aa20.39■□□□□ 0.85
LMO4-204ENST00000495705 KBTBD6Q86V97 674 aa20.39■□□□□ 0.85
LMO4-204ENST00000495705 RFX6Q8HWS3 928 aa20.39■□□□□ 0.85
LMO4-204ENST00000495705 CCDC50Q8IVM0 306 aa20.39■□□□□ 0.85
LMO4-204ENST00000495705 TP53INP2Q8IXH6 220 aa20.39■□□□□ 0.85
LMO4-204ENST00000495705 PLD5Q8N7P1 536 aa20.39■□□□□ 0.85
LMO4-204ENST00000495705 OR2AP1Q8NGE2 309 aa20.39■□□□□ 0.85
LMO4-204ENST00000495705 ZC3H10Q96K80 434 aaKnown RBP20.39■□□□□ 0.85
LMO4-204ENST00000495705 GDAP1L1Q96MZ0 367 aa20.39■□□□□ 0.85
LMO4-204ENST00000495705 ZNF830Q96NB3 372 aaPredicted RBP20.39■□□□□ 0.85
LMO4-204ENST00000495705 TM6SF2Q9BZW4 377 aa20.39■□□□□ 0.85
LMO4-204ENST00000495705 INVSQ9Y283 1065 aa20.39■□□□□ 0.85
LMO4-204ENST00000495705 NCKAP1Q9Y2A7 1128 aa20.39■□□□□ 0.85
LMO4-204ENST00000495705 THADAQ6YHU6 1953 aa20.38■□□□□ 0.85
LMO4-204ENST00000495705 MID1O15344 667 aa20.38■□□□□ 0.85
LMO4-204ENST00000495705 MAP3K13O43283 966 aa20.38■□□□□ 0.85
LMO4-204ENST00000495705 IGSF6O95976 241 aa20.38■□□□□ 0.85
LMO4-204ENST00000495705 LMNAP02545 664 aaKnown RBP20.38■□□□□ 0.85
LMO4-204ENST00000495705 CD6P30203 668 aa20.38■□□□□ 0.85
LMO4-204ENST00000495705 SLC8A1P32418 973 aa20.38■□□□□ 0.85
LMO4-204ENST00000495705 GARSP41250 739 aaKnown RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms