RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, human

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-208	ENST00000495327	ACVRL1	P37023	503 aa		13.61	□□□□□ -0.23
RBM28-208	ENST00000495327	NOVA1	P51513	510 aa	Known RBP	13.61	□□□□□ -0.23
RBM28-208	ENST00000495327	RACK1	P63244	317 aa	Known RBP	13.61	□□□□□ -0.23
RBM28-208	ENST00000495327	BNC1	Q01954	994 aa		13.61	□□□□□ -0.23
RBM28-208	ENST00000495327	TEAD4	Q15561	434 aa		13.61	□□□□□ -0.23
RBM28-208	ENST00000495327	VPS36	Q86VN1	386 aa		13.61	□□□□□ -0.23
RBM28-208	ENST00000495327	DNAAF5	Q86Y56	855 aa		13.61	□□□□□ -0.23
RBM28-208	ENST00000495327	OR2I1P	Q8NGU4	316 aa		13.61	□□□□□ -0.23
RBM28-208	ENST00000495327	OR14C36	Q8NHC7	312 aa		13.61	□□□□□ -0.23
RBM28-208	ENST00000495327	ISG20	Q96AZ6	181 aa	Known RBP	13.61	□□□□□ -0.23
RBM28-208	ENST00000495327	XPO4	Q9C0E2	1151 aa	Known RBP	13.61	□□□□□ -0.23
RBM28-208	ENST00000495327	CATSPERB	Q9H7T0	1116 aa		13.61	□□□□□ -0.23
RBM28-208	ENST00000495327	MRPL47	Q9HD33	250 aa	Known RBP	13.61	□□□□□ -0.23
RBM28-208	ENST00000495327	AP4E1	Q9UPM8	1137 aa		13.61	□□□□□ -0.23
RBM28-208	ENST00000495327	LUC7L2	Q9Y383	392 aa	Known RBP	13.61	□□□□□ -0.23
RBM28-208	ENST00000495327	ANKRD36	A6QL64	1941 aa		13.6	□□□□□ -0.23
RBM28-208	ENST00000495327	BNIP3L	O60238	219 aa		13.6	□□□□□ -0.23
RBM28-208	ENST00000495327	RNF8	O76064	485 aa		13.6	□□□□□ -0.23
RBM28-208	ENST00000495327	CD59	P13987	128 aa		13.6	□□□□□ -0.23
RBM28-208	ENST00000495327	KCNA4	P22459	653 aa		13.6	□□□□□ -0.23
RBM28-208	ENST00000495327	NUDT1	P36639	197 aa		13.6	□□□□□ -0.23
RBM28-208	ENST00000495327	RECQL	P46063	649 aa	Predicted RBP	13.6	□□□□□ -0.23
RBM28-208	ENST00000495327	YBEY	P58557	167 aa	Predicted RBP	13.6	□□□□□ -0.23
RBM28-208	ENST00000495327	PPP2CB	P62714	309 aa		13.6	□□□□□ -0.23
RBM28-208	ENST00000495327	PPP2CA	P67775	309 aa		13.6	□□□□□ -0.23
RBM28-208	ENST00000495327	CNTN1	Q12860	1018 aa		13.6	□□□□□ -0.23
RBM28-208	ENST00000495327	POLD3	Q15054	466 aa	Predicted RBP	13.6	□□□□□ -0.23
RBM28-208	ENST00000495327	PIP5KL1	Q5T9C9	394 aa		13.6	□□□□□ -0.23
RBM28-208	ENST00000495327	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	13.6	□□□□□ -0.23
RBM28-208	ENST00000495327	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	13.6	□□□□□ -0.23
RBM28-208	ENST00000495327	DPY19L3	Q6ZPD9	716 aa		13.6	□□□□□ -0.23
RBM28-208	ENST00000495327	TRIM69	Q86WT6	500 aa		13.6	□□□□□ -0.23
RBM28-208	ENST00000495327	PSTK	Q8IV42	348 aa	Known RBP	13.6	□□□□□ -0.23
RBM28-208	ENST00000495327	PLPP6	Q8IY26	295 aa		13.6	□□□□□ -0.23
RBM28-208	ENST00000495327	ARFGAP1	Q8N6T3	406 aa		13.6	□□□□□ -0.23
RBM28-208	ENST00000495327	CHST14	Q8NCH0	376 aa		13.6	□□□□□ -0.23
RBM28-208	ENST00000495327	PPP1R16A	Q96I34	528 aa		13.6	□□□□□ -0.23
RBM28-208	ENST00000495327	PEBP4	Q96S96	227 aa		13.6	□□□□□ -0.23
RBM28-208	ENST00000495327	NCAPG	Q9BPX3	1015 aa		13.6	□□□□□ -0.23
RBM28-208	ENST00000495327	TNKS2	Q9H2K2	1166 aa		13.6	□□□□□ -0.23
RBM28-208	ENST00000495327	SLC32A1	Q9H598	525 aa		13.6	□□□□□ -0.23
RBM28-208	ENST00000495327	NOL6	Q9H6R4	1146 aa	Known RBP	13.6	□□□□□ -0.23
RBM28-208	ENST00000495327	PREB	Q9HCU5	417 aa		13.6	□□□□□ -0.23
RBM28-208	ENST00000495327	DONSON	Q9NYP3	566 aa		13.6	□□□□□ -0.23
RBM28-208	ENST00000495327	IL36A	Q9UHA7	158 aa		13.6	□□□□□ -0.23
RBM28-208	ENST00000495327	HPCAL4	Q9UM19	191 aa		13.6	□□□□□ -0.23
RBM28-208	ENST00000495327	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	13.6	□□□□□ -0.23	1e-9	■■□□□ 13.8
RBM28-208	ENST00000495327		A0A1B0GVT2	93 aa		13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	KPNA3	O00505	521 aa	Predicted RBP	13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	CBFA2T2	O43439	604 aa		13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	CREB3	O43889	395 aa		13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	LRCH4	O75427	683 aa		13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	PML	P29590	882 aa		13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	HNRNPH3	P31942	346 aa	Known RBP	13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	CSNK1E	P49674	416 aa	Known RBP	13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	CCNH	P51946	323 aa	Predicted RBP	13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	ZNF135	P52742	658 aa	Predicted RBP	13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	TPI1	P60174	286 aa		13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	CCDC15	Q0P6D6	951 aa		13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	TRIM14	Q14142	442 aa		13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	ACAP1	Q15027	740 aa		13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	PARP15	Q460N3	678 aa		13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	CARD16	Q5EG05	197 aa		13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	UMODL1-AS1	Q8N2C9	162 aa		13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	DEFB124	Q8NES8	71 aa		13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	GRIN3A	Q8TCU5	1115 aa		13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	CASKIN2	Q8WXE0	1202 aa		13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	ARRDC3	Q96B67	414 aa		13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	SLC6A18	Q96N87	628 aa		13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	SNRNP25	Q9BV90	132 aa	Known RBP	13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	HDAC8	Q9BY41	377 aa		13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	TRIM7	Q9C029	511 aa		13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	TSPY26P	Q9H489	355 aa		13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	GAREM1	Q9H706	876 aa		13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	EBF2	Q9HAK2	575 aa		13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	FCF1	Q9Y324	198 aa	Known RBP	13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	WASF2	Q9Y6W5	498 aa		13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	COL5A1	P20908	1838 aa	Predicted RBP	13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	TRPM6	Q9BX84	2022 aa		13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	CEP295	Q9C0D2	2601 aa		13.59	□□□□□ -0.23
RBM28-208	ENST00000495327	KNL1	Q8NG31	2342 aa		13.58	□□□□□ -0.23
RBM28-208	ENST00000495327	TBC1D3D	A0A087WVF3	549 aa		13.58	□□□□□ -0.24
RBM28-208	ENST00000495327	TBC1D3I	A0A087WXS9	549 aa		13.58	□□□□□ -0.24
RBM28-208	ENST00000495327		A0A087X0T9	212 aa		13.58	□□□□□ -0.24
RBM28-208	ENST00000495327	TBC1D3E	A0A087X179	549 aa		13.58	□□□□□ -0.24
RBM28-208	ENST00000495327	TBC1D3K	A0A087X1G2	549 aa		13.58	□□□□□ -0.24
RBM28-208	ENST00000495327	TBC1D3F	A6NER0	549 aa	Predicted RBP	13.58	□□□□□ -0.24
RBM28-208	ENST00000495327	TBC1D3L	B9A6J9	549 aa		13.58	□□□□□ -0.24
RBM28-208	ENST00000495327	PLK4	O00444	970 aa		13.58	□□□□□ -0.24
RBM28-208	ENST00000495327	GIPC1	O14908	333 aa		13.58	□□□□□ -0.24
RBM28-208	ENST00000495327	VILL	O15195	856 aa		13.58	□□□□□ -0.24
RBM28-208	ENST00000495327	KDELR3	O43731	214 aa		13.58	□□□□□ -0.24
RBM28-208	ENST00000495327	PRPSAP2	O60256	369 aa		13.58	□□□□□ -0.24
RBM28-208	ENST00000495327	LEFTY1	O75610	366 aa		13.58	□□□□□ -0.24
RBM28-208	ENST00000495327	GSR	P00390	522 aa		13.58	□□□□□ -0.24
RBM28-208	ENST00000495327	TBC1D3H	P0C7X1	549 aa		13.58	□□□□□ -0.24
RBM28-208	ENST00000495327	FAM228B	P0C875	321 aa		13.58	□□□□□ -0.24
RBM28-208	ENST00000495327	ITGB7	P26010	798 aa		13.58	□□□□□ -0.24
RBM28-208	ENST00000495327	CASP14	P31944	242 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 67 ms