RNA–Protein interactions for RNA: ENST00000495082.5

SLC13A3-211, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 1,887 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-211ENST00000495082 ETNK1Q9HBU6 452 aa11.73□□□□□ -0.53
SLC13A3-211ENST00000495082 EIF2B3Q9NR50 452 aaKnown RBP11.73□□□□□ -0.53
SLC13A3-211ENST00000495082 ABCB8Q9NUT2 735 aa11.73□□□□□ -0.53
SLC13A3-211ENST00000495082 HAUS2Q9NVX0 235 aa11.73□□□□□ -0.53
SLC13A3-211ENST00000495082 UBA2Q9UBT2 640 aaPredicted RBP11.73□□□□□ -0.53
SLC13A3-211ENST00000495082 ATP8A1Q9Y2Q0 1164 aa11.73□□□□□ -0.53
SLC13A3-211ENST00000495082 CBX4O00257 560 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 GLDCP23378 1020 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 MMP13P45452 471 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 GEMIN4P57678 1058 aaKnown RBP11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 CDK16Q00536 496 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 HTR4Q13639 388 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 DMC1Q14565 340 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 INO80DQ53TQ3 878 aaPredicted RBP11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 RETSATQ6NUM9 610 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 EMBQ6PCB8 327 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 ETFBKMTQ8IXQ9 262 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 APCDD1Q8J025 514 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 KRT222Q8N1A0 295 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 CPA6Q8N4T0 437 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 PRCCQ92733 491 aaPredicted RBP11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 ZFYVE19Q96K21 471 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 XPO6Q96QU8 1125 aaKnown RBP11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 FCRL5Q96RD9 977 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 EBF3Q9H4W6 596 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 ECT2Q9H8V3 914 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 GLOD4Q9HC38 313 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 HPS4Q9NQG7 708 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 MTRF1LQ9UGC7 380 aaKnown RBP11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 RSPH14Q9UHP6 348 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 VPS51Q9UID3 782 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 INTS6Q9UL03 887 aaKnown RBP11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 ERI2A8K979 691 aaKnown RBP11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 SNAP91O60641 907 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 NEBLO76041 1014 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 HLA-DQB2P05538 268 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 PABPC1P11940 636 aaKnown RBP11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 NFKB1P19838 968 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 TPSB2P20231 275 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 PSMB4P28070 264 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 NR1H3Q13133 447 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 GRM2Q14416 872 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 SKIV2LQ15477 1246 aaKnown RBP11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 TPSAB1Q15661 275 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 GAB4Q2WGN9 574 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 PITRM1Q5JRX3 1037 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 ALG1LQ6GMV1 187 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 ASTLQ6HA08 431 aaPredicted RBP11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 BBS5Q8N3I7 341 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 ZCCHC9Q8N567 271 aaKnown RBP11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 USP33Q8TEY7 942 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 CAVIN3Q969G5 261 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 PSKH2Q96QS6 385 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 GORASP1Q9BQQ3 440 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 TRMT61BQ9BVS5 477 aaKnown RBP11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 FRMD8Q9BZ67 464 aaPredicted RBP11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 PHACTR1Q9C0D0 580 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 TSPYL1Q9H0U9 437 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 SEPT3Q9UH03 358 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 GGA2Q9UJY4 613 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 SLC27A6Q9Y2P4 619 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 NUMBLQ9Y6R0 609 aa11.72□□□□□ -0.53
SLC13A3-211ENST00000495082 OTOL1A6NHN0 477 aaPredicted RBP11.71□□□□□ -0.53
SLC13A3-211ENST00000495082 ARNTLO00327 626 aa11.71□□□□□ -0.53
SLC13A3-211ENST00000495082 CD160O95971 181 aa11.71□□□□□ -0.53
SLC13A3-211ENST00000495082 APRTP07741 180 aa11.71□□□□□ -0.53
SLC13A3-211ENST00000495082 CISD3P0C7P0 127 aa11.71□□□□□ -0.53
SLC13A3-211ENST00000495082 HSPA9P38646 679 aaKnown RBP11.71□□□□□ -0.53
SLC13A3-211ENST00000495082 CBX1P83916 185 aa11.71□□□□□ -0.53
SLC13A3-211ENST00000495082 SULT2A1Q06520 285 aa11.71□□□□□ -0.53
SLC13A3-211ENST00000495082 SLC20A2Q08357 652 aa11.71□□□□□ -0.53
SLC13A3-211ENST00000495082 CBLBQ13191 982 aa11.71□□□□□ -0.53
SLC13A3-211ENST00000495082 RUNX3Q13761 415 aa11.71□□□□□ -0.53
SLC13A3-211ENST00000495082 LEXMQ3ZCV2 418 aa11.71□□□□□ -0.53
SLC13A3-211ENST00000495082 FUT11Q495W5 492 aa11.71□□□□□ -0.53
SLC13A3-211ENST00000495082 FAM182AQ5T1J6 154 aa11.71□□□□□ -0.53
SLC13A3-211ENST00000495082 FAXCQ5TGI0 409 aa11.71□□□□□ -0.53
SLC13A3-211ENST00000495082 ANKRD22Q5VYY1 191 aa11.71□□□□□ -0.53
SLC13A3-211ENST00000495082 METTL3Q86U44 580 aaKnown RBP11.71□□□□□ -0.53
SLC13A3-211ENST00000495082 AHI1Q8N157 1196 aa11.71□□□□□ -0.53
SLC13A3-211ENST00000495082 TAB3Q8N5C8 712 aaPredicted RBP11.71□□□□□ -0.53
SLC13A3-211ENST00000495082 MCUQ8NE86 351 aa11.71□□□□□ -0.53
SLC13A3-211ENST00000495082 ST13P5Q8NFI4 369 aaPredicted RBP11.71□□□□□ -0.53
SLC13A3-211ENST00000495082 MGME1Q9BQP7 344 aa11.71□□□□□ -0.53
SLC13A3-211ENST00000495082 PHF7Q9BWX1 381 aaPredicted RBP11.71□□□□□ -0.53
SLC13A3-211ENST00000495082 SLC25A51Q9H1U9 297 aa11.71□□□□□ -0.53
SLC13A3-211ENST00000495082 TCRBV7S3A2A0A539 114 aa11.7□□□□□ -0.54
SLC13A3-211ENST00000495082 E7EVH7 732 aa11.7□□□□□ -0.54
SLC13A3-211ENST00000495082 ANXA9O76027 345 aa11.7□□□□□ -0.54
SLC13A3-211ENST00000495082 TMEM63AO94886 807 aa11.7□□□□□ -0.54
SLC13A3-211ENST00000495082 SUN1O94901 812 aa11.7□□□□□ -0.54
SLC13A3-211ENST00000495082 FAM153BP0C7A2 387 aa11.7□□□□□ -0.54
SLC13A3-211ENST00000495082 GDI1P31150 447 aa11.7□□□□□ -0.54
SLC13A3-211ENST00000495082 TNNT3P45378 269 aaPredicted RBP11.7□□□□□ -0.54
SLC13A3-211ENST00000495082 PRPSAP1Q14558 356 aa11.7□□□□□ -0.54
SLC13A3-211ENST00000495082 ZNF235Q14590 738 aa11.7□□□□□ -0.54
SLC13A3-211ENST00000495082 SMAD2Q15796 467 aaKnown RBP11.7□□□□□ -0.54
SLC13A3-211ENST00000495082 FAM153CQ494X1 144 aa11.7□□□□□ -0.54
SLC13A3-211ENST00000495082 KCTD11Q693B1 232 aa11.7□□□□□ -0.54
SLC13A3-211ENST00000495082 PPP1R21Q6ZMI0 780 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms