RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 MMRN1Q13201 1228 aa17.47■□□□□ 0.39
SNX17-209ENST00000494893 PLA2G2CQ5R387 149 aa17.47■□□□□ 0.39
SNX17-209ENST00000494893 RETSATQ6NUM9 610 aa17.47■□□□□ 0.39
SNX17-209ENST00000494893 SLC36A4Q6YBV0 504 aa17.47■□□□□ 0.39
SNX17-209ENST00000494893 ARMCX6Q7L4S7 300 aa17.47■□□□□ 0.39
SNX17-209ENST00000494893 LPCAT2Q7L5N7 544 aa17.47■□□□□ 0.39
SNX17-209ENST00000494893 FAM124AQ86V42 546 aa17.47■□□□□ 0.39
SNX17-209ENST00000494893 RHOT2Q8IXI1 618 aa17.47■□□□□ 0.39
SNX17-209ENST00000494893 SLC39A8Q9C0K1 460 aa17.47■□□□□ 0.39
SNX17-209ENST00000494893 SMOC1Q9H4F8 434 aa17.47■□□□□ 0.39
SNX17-209ENST00000494893 SALL4Q9UJQ4 1053 aa17.47■□□□□ 0.39
SNX17-209ENST00000494893 FAM186AA6NE01 2351 aa17.46■□□□□ 0.39
SNX17-209ENST00000494893 CXorf51AA0A1B0GTR3 108 aa17.46■□□□□ 0.39
SNX17-209ENST00000494893 BTNL10A8MVZ5 291 aa17.46■□□□□ 0.39
SNX17-209ENST00000494893 C10orf142B7Z368 130 aa17.46■□□□□ 0.39
SNX17-209ENST00000494893 H3BRJ5 948 aa17.46■□□□□ 0.39
SNX17-209ENST00000494893 PLK4O00444 970 aa17.46■□□□□ 0.39
SNX17-209ENST00000494893 MCF2LO15068 1137 aa17.46■□□□□ 0.39
SNX17-209ENST00000494893 KRT86O43790 486 aa17.46■□□□□ 0.39
SNX17-209ENST00000494893 DNTTP04053 509 aa17.46■□□□□ 0.39
SNX17-209ENST00000494893 ACADMP11310 421 aa17.46■□□□□ 0.39
SNX17-209ENST00000494893 SLC8A1P32418 973 aa17.46■□□□□ 0.39
SNX17-209ENST00000494893 DRD3P35462 400 aa17.46■□□□□ 0.39
SNX17-209ENST00000494893 GJC1P36383 396 aa17.46■□□□□ 0.39
SNX17-209ENST00000494893 DHPSP49366 369 aaPredicted RBP17.46■□□□□ 0.39
SNX17-209ENST00000494893 ZNF135P52742 658 aaPredicted RBP17.46■□□□□ 0.39
SNX17-209ENST00000494893 NDST2P52849 883 aa17.46■□□□□ 0.39
SNX17-209ENST00000494893 HADHBP55084 474 aaKnown RBP17.46■□□□□ 0.39
SNX17-209ENST00000494893 SLC20A2Q08357 652 aa17.46■□□□□ 0.39
SNX17-209ENST00000494893 PARP15Q460N3 678 aa17.46■□□□□ 0.39
SNX17-209ENST00000494893 ZNF419Q96HQ0 510 aaPredicted RBP17.46■□□□□ 0.39
SNX17-209ENST00000494893 GPR174Q9BXC1 333 aa17.46■□□□□ 0.39
SNX17-209ENST00000494893 PDFQ9HBH1 243 aa17.46■□□□□ 0.39
SNX17-209ENST00000494893 LZTFL1Q9NQ48 299 aa17.46■□□□□ 0.39
SNX17-209ENST00000494893 TMEM74BQ9NUR3 256 aa17.46■□□□□ 0.39
SNX17-209ENST00000494893 KLHL11Q9NVR0 708 aa17.46■□□□□ 0.39
SNX17-209ENST00000494893 TRIM10Q9UDY6 481 aa17.46■□□□□ 0.39
SNX17-209ENST00000494893 PPM1HQ9ULR3 514 aa17.46■□□□□ 0.39
SNX17-209ENST00000494893 SPAG17Q6Q759 2223 aa17.45■□□□□ 0.38
SNX17-209ENST00000494893 CFAP54Q96N23 3096 aa17.45■□□□□ 0.38
SNX17-209ENST00000494893 TNRC6BQ9UPQ9 1833 aaKnown RBP17.45■□□□□ 0.38
SNX17-209ENST00000494893 J3KR12 359 aa17.45■□□□□ 0.38
SNX17-209ENST00000494893 DAPK3O43293 454 aa17.45■□□□□ 0.38
SNX17-209ENST00000494893 BNIP3LO60238 219 aa17.45■□□□□ 0.38
SNX17-209ENST00000494893 OXTRP30559 389 aa17.45■□□□□ 0.38
SNX17-209ENST00000494893 MPLP40238 635 aa17.45■□□□□ 0.38
SNX17-209ENST00000494893 SSR1P43307 286 aaKnown RBP17.45■□□□□ 0.38
SNX17-209ENST00000494893 PAPOLAP51003 745 aaKnown RBP17.45■□□□□ 0.38
SNX17-209ENST00000494893 CDH6P55285 790 aa17.45■□□□□ 0.38
SNX17-209ENST00000494893 CREB5Q02930 508 aa17.45■□□□□ 0.38
SNX17-209ENST00000494893 DPYSL3Q14195 570 aa17.45■□□□□ 0.38
SNX17-209ENST00000494893 HADHQ16836 314 aaKnown RBP17.45■□□□□ 0.38
SNX17-209ENST00000494893 SPDYCQ5MJ68 293 aa17.45■□□□□ 0.38
SNX17-209ENST00000494893 DPY19L3Q6ZPD9 716 aa17.45■□□□□ 0.38
SNX17-209ENST00000494893 ARHGAP36Q6ZRI8 547 aa17.45■□□□□ 0.38
SNX17-209ENST00000494893 OR8D1Q8WZ84 308 aa17.45■□□□□ 0.38
SNX17-209ENST00000494893 FAM131CQ96AQ9 280 aa17.45■□□□□ 0.38
SNX17-209ENST00000494893 HINFPQ9BQA5 517 aa17.45■□□□□ 0.38
SNX17-209ENST00000494893 CEP44Q9C0F1 390 aa17.45■□□□□ 0.38
SNX17-209ENST00000494893 GOLPH3Q9H4A6 298 aa17.45■□□□□ 0.38
SNX17-209ENST00000494893 SEMA4GQ9NTN9 838 aa17.45■□□□□ 0.38
SNX17-209ENST00000494893 FBXL12Q9NXK8 326 aa17.45■□□□□ 0.38
SNX17-209ENST00000494893 HYOU1Q9Y4L1 999 aa17.45■□□□□ 0.38
SNX17-209ENST00000494893 PCDHGA5Q9Y5G8 931 aa17.45■□□□□ 0.38
SNX17-209ENST00000494893 WASF2Q9Y6W5 498 aa17.45■□□□□ 0.38
SNX17-209ENST00000494893 SDK1Q7Z5N4 2213 aa17.45■□□□□ 0.38
SNX17-209ENST00000494893 A0A0A6YYK5 440 aaPredicted RBP17.44■□□□□ 0.38
SNX17-209ENST00000494893 A0A1W2PP55 124 aa17.44■□□□□ 0.38
SNX17-209ENST00000494893 ALOX15BO15296 676 aa17.44■□□□□ 0.38
SNX17-209ENST00000494893 RNASEH1O60930 286 aaKnown RBP17.44■□□□□ 0.38
SNX17-209ENST00000494893 IL1BP01584 269 aa17.44■□□□□ 0.38
SNX17-209ENST00000494893 ITPKAP23677 461 aa17.44■□□□□ 0.38
SNX17-209ENST00000494893 ARL4AP40617 200 aa17.44■□□□□ 0.38
SNX17-209ENST00000494893 ZNF33AQ06730 810 aa17.44■□□□□ 0.38
SNX17-209ENST00000494893 TTC31Q49AM3 519 aaPredicted RBP17.44■□□□□ 0.38
SNX17-209ENST00000494893 PEAR1Q5VY43 1037 aaPredicted RBP17.44■□□□□ 0.38
SNX17-209ENST00000494893 USP30Q70CQ3 517 aa17.44■□□□□ 0.38
SNX17-209ENST00000494893 PCDH20Q8N6Y1 951 aaKnown RBP17.44■□□□□ 0.38
SNX17-209ENST00000494893 PIP4K2CQ8TBX8 421 aa17.44■□□□□ 0.38
SNX17-209ENST00000494893 RAPGEF5Q92565 580 aa17.44■□□□□ 0.38
SNX17-209ENST00000494893 ISG20Q96AZ6 181 aaKnown RBP17.44■□□□□ 0.38
SNX17-209ENST00000494893 HSPA12BQ96MM6 686 aa17.44■□□□□ 0.38
SNX17-209ENST00000494893 TM6SF2Q9BZW4 377 aa17.44■□□□□ 0.38
SNX17-209ENST00000494893 NEUROG2Q9H2A3 272 aa17.44■□□□□ 0.38
SNX17-209ENST00000494893 C6orf106Q9H6K1 298 aaPredicted RBP17.44■□□□□ 0.38
SNX17-209ENST00000494893 LCMT1Q9UIC8 334 aa17.44■□□□□ 0.38
SNX17-209ENST00000494893 GUCA1BQ9UMX6 200 aa17.44■□□□□ 0.38
SNX17-209ENST00000494893 SCML1Q9UN30 329 aa17.44■□□□□ 0.38
SNX17-209ENST00000494893 DUSP10Q9Y6W6 482 aa17.44■□□□□ 0.38
SNX17-209ENST00000494893 THADAQ6YHU6 1953 aa17.44■□□□□ 0.38
SNX17-209ENST00000494893 ATXN2Q99700 1313 aaKnown RBP17.44■□□□□ 0.38
SNX17-209ENST00000494893 PATE3B3GLJ2 98 aa17.43■□□□□ 0.38
SNX17-209ENST00000494893 BUB1O43683 1085 aa17.43■□□□□ 0.38
SNX17-209ENST00000494893 BUB1BO60566 1050 aaPredicted RBP17.43■□□□□ 0.38
SNX17-209ENST00000494893 PRAMEF11O60813 436 aa17.43■□□□□ 0.38
SNX17-209ENST00000494893 LRP3O75074 770 aa17.43■□□□□ 0.38
SNX17-209ENST00000494893 TMCC1O94876 653 aa17.43■□□□□ 0.38
SNX17-209ENST00000494893 ADH1BP00325 375 aa17.43■□□□□ 0.38
SNX17-209ENST00000494893 C5AR1P21730 350 aa17.43■□□□□ 0.38
SNX17-209ENST00000494893 CHRNA3P32297 505 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms