RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 MAGEH1Q9H213 219 aa33.91■■■■□ 3.02
CBX4-203ENST00000494546 FNDC3AQ9Y2H6 1198 aaKnown RBP33.91■■■■□ 3.02
CBX4-203ENST00000494546 FCF1Q9Y324 198 aaKnown RBP33.91■■■■□ 3.02
CBX4-203ENST00000494546 ACTL7AQ9Y615 435 aa33.91■■■■□ 3.02
CBX4-203ENST00000494546 PLRG1O43660 514 aaKnown RBP33.9■■■■□ 3.02
CBX4-203ENST00000494546 PPP2CBP62714 309 aa33.9■■■■□ 3.02
CBX4-203ENST00000494546 PPP2CAP67775 309 aa33.9■■■■□ 3.02
CBX4-203ENST00000494546 TDRD12Q587J7 1177 aaKnown RBP33.9■■■■□ 3.02
CBX4-203ENST00000494546 DPY19L3Q6ZPD9 716 aa33.9■■■■□ 3.02
CBX4-203ENST00000494546 TMIEQ8NEW7 156 aa33.9■■■■□ 3.02
CBX4-203ENST00000494546 ZNF653Q96CK0 615 aa33.9■■■■□ 3.02
CBX4-203ENST00000494546 EPAS1Q99814 870 aa33.9■■■■□ 3.02
CBX4-203ENST00000494546 CEP44Q9C0F1 390 aa33.9■■■■□ 3.02
CBX4-203ENST00000494546 IFNKQ9P0W0 207 aa33.9■■■■□ 3.02
CBX4-203ENST00000494546 CNOT8Q9UFF9 292 aaKnown RBP33.9■■■■□ 3.02
CBX4-203ENST00000494546 IL36AQ9UHA7 158 aa33.9■■■■□ 3.02
CBX4-203ENST00000494546 HPCAL4Q9UM19 191 aa33.9■■■■□ 3.02
CBX4-203ENST00000494546 A0A1W2PQJ5 194 aa33.89■■■■□ 3.02
CBX4-203ENST00000494546 SH3BP5O60239 455 aa33.89■■■■□ 3.02
CBX4-203ENST00000494546 ZNF821O75541 412 aaPredicted RBP33.89■■■■□ 3.02
CBX4-203ENST00000494546 PRNPP04156 253 aa33.89■■■■□ 3.02
CBX4-203ENST00000494546 AIF1P55008 147 aa33.89■■■■□ 3.02
CBX4-203ENST00000494546 POLD3Q15054 466 aaPredicted RBP33.89■■■■□ 3.02
CBX4-203ENST00000494546 ARSIQ5FYB1 569 aa33.89■■■■□ 3.02
CBX4-203ENST00000494546 ZNF354CQ86Y25 554 aa33.89■■■■□ 3.02
CBX4-203ENST00000494546 PCDH20Q8N6Y1 951 aaKnown RBP33.89■■■■□ 3.02
CBX4-203ENST00000494546 CAMK1GQ96NX5 476 aa33.89■■■■□ 3.02
CBX4-203ENST00000494546 KDM4CQ9H3R0 1056 aa33.89■■■■□ 3.02
CBX4-203ENST00000494546 DYRK4Q9NR20 520 aa33.89■■■■□ 3.02
CBX4-203ENST00000494546 AASDHPPTQ9NRN7 309 aa33.89■■■■□ 3.02
CBX4-203ENST00000494546 TM7SF3Q9NS93 570 aa33.89■■■■□ 3.02
CBX4-203ENST00000494546 SPAARA0A1B0GVQ0 90 aa33.88■■■■□ 3.01
CBX4-203ENST00000494546 C10orf142B7Z368 130 aa33.88■■■■□ 3.01
CBX4-203ENST00000494546 C21orf59P57076 290 aa33.88■■■■□ 3.01
CBX4-203ENST00000494546 KCNT1Q5JUK3 1230 aa33.88■■■■□ 3.01
CBX4-203ENST00000494546 RTL3Q8N8U3 475 aaKnown RBP33.88■■■■□ 3.01
CBX4-203ENST00000494546 ANGPTL2Q9UKU9 493 aa33.88■■■■□ 3.01
CBX4-203ENST00000494546 TPX2Q9ULW0 747 aaKnown RBP33.88■■■■□ 3.01
CBX4-203ENST00000494546 MAT2AP31153 395 aaKnown RBP33.87■■■■□ 3.01
CBX4-203ENST00000494546 SIM1P81133 766 aaPredicted RBP33.87■■■■□ 3.01
CBX4-203ENST00000494546 LEKR1Q6ZMV7 388 aa33.87■■■■□ 3.01
CBX4-203ENST00000494546 NAXDQ8IW45 347 aa33.87■■■■□ 3.01
CBX4-203ENST00000494546 ARRDC3Q96B67 414 aa33.87■■■■□ 3.01
CBX4-203ENST00000494546 SERAC1Q96JX3 654 aa33.87■■■■□ 3.01
CBX4-203ENST00000494546 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP33.87■■■■□ 3.01
CBX4-203ENST00000494546 GPATCH2LQ9NWQ4 482 aa33.87■■■■□ 3.01
CBX4-203ENST00000494546 MYO1AQ9UBC5 1043 aa33.87■■■■□ 3.01
CBX4-203ENST00000494546 TMEM191CA6NGB0 347 aa33.86■■■■□ 3.01
CBX4-203ENST00000494546 RNF103O00237 685 aa33.86■■■■□ 3.01
CBX4-203ENST00000494546 KCNK3O14649 394 aa33.86■■■■□ 3.01
CBX4-203ENST00000494546 CD160O95971 181 aa33.86■■■■□ 3.01
CBX4-203ENST00000494546 ZNF883P0CG24 379 aa33.86■■■■□ 3.01
CBX4-203ENST00000494546 GEMIN4P57678 1058 aaKnown RBP33.86■■■■□ 3.01
CBX4-203ENST00000494546 FOXC1Q12948 553 aa33.86■■■■□ 3.01
CBX4-203ENST00000494546 CARD16Q5EG05 197 aa33.86■■■■□ 3.01
CBX4-203ENST00000494546 PIP5KL1Q5T9C9 394 aa33.86■■■■□ 3.01
CBX4-203ENST00000494546 HGSNATQ68CP4 663 aa33.86■■■■□ 3.01
CBX4-203ENST00000494546 PRPF39Q86UA1 669 aaKnown RBP33.86■■■■□ 3.01
CBX4-203ENST00000494546 TRIM11Q96F44 468 aa33.86■■■■□ 3.01
CBX4-203ENST00000494546 TM6SF2Q9BZW4 377 aa33.86■■■■□ 3.01
CBX4-203ENST00000494546 TRIM7Q9C029 511 aa33.86■■■■□ 3.01
CBX4-203ENST00000494546 CATSPERBQ9H7T0 1116 aa33.86■■■■□ 3.01
CBX4-203ENST00000494546 PLXNA2O75051 1894 aa33.86■■■■□ 3.01
CBX4-203ENST00000494546 VILLO15195 856 aa33.85■■■■□ 3.01
CBX4-203ENST00000494546 LATO43561 262 aa33.85■■■■□ 3.01
CBX4-203ENST00000494546 LEFTY1O75610 366 aa33.85■■■■□ 3.01
CBX4-203ENST00000494546 FAM193AP78312 1265 aa33.85■■■■□ 3.01
CBX4-203ENST00000494546 ZBED6P86452 979 aa33.85■■■■□ 3.01
CBX4-203ENST00000494546 CCDC15Q0P6D6 951 aa33.85■■■■□ 3.01
CBX4-203ENST00000494546 SYN2Q92777 582 aaPredicted RBP33.85■■■■□ 3.01
CBX4-203ENST00000494546 SKA1Q96BD8 255 aa33.85■■■■□ 3.01
CBX4-203ENST00000494546 HEPHQ9BQS7 1158 aa33.85■■■■□ 3.01
CBX4-203ENST00000494546 PCSK1NQ9UHG2 260 aa33.85■■■■□ 3.01
CBX4-203ENST00000494546 CAPN11Q9UMQ6 739 aa33.85■■■■□ 3.01
CBX4-203ENST00000494546 PCDHB9Q9Y5E1 797 aa33.85■■■■□ 3.01
CBX4-203ENST00000494546 BZW2Q9Y6E2 419 aaKnown RBP33.85■■■■□ 3.01
CBX4-203ENST00000494546 SCINQ9Y6U3 715 aa33.85■■■■□ 3.01
CBX4-203ENST00000494546 WASF2Q9Y6W5 498 aa33.85■■■■□ 3.01
CBX4-203ENST00000494546 CXorf51AA0A1B0GTR3 108 aa33.84■■■■□ 3.01
CBX4-203ENST00000494546 WNT9AO14904 365 aa33.84■■■■□ 3.01
CBX4-203ENST00000494546 KDELR3O43731 214 aa33.84■■■■□ 3.01
CBX4-203ENST00000494546 MYBL1P10243 752 aa33.84■■■■□ 3.01
CBX4-203ENST00000494546 CD38P28907 300 aa33.84■■■■□ 3.01
CBX4-203ENST00000494546 CTSKP43235 329 aa33.84■■■■□ 3.01
CBX4-203ENST00000494546 CCNHP51946 323 aaPredicted RBP33.84■■■■□ 3.01
CBX4-203ENST00000494546 TAS2R38P59533 333 aa33.84■■■■□ 3.01
CBX4-203ENST00000494546 TPI1P60174 286 aa33.84■■■■□ 3.01
CBX4-203ENST00000494546 RYBPQ8N488 228 aaPredicted RBP33.84■■■■□ 3.01
CBX4-203ENST00000494546 SETD7Q8WTS6 366 aaKnown RBP33.84■■■■□ 3.01
CBX4-203ENST00000494546 IQCDQ96DY2 449 aa33.84■■■■□ 3.01
CBX4-203ENST00000494546 PPP1R16AQ96I34 528 aa33.84■■■■□ 3.01
CBX4-203ENST00000494546 CNTNAP3BQ96NU0 1288 aa33.84■■■■□ 3.01
CBX4-203ENST00000494546 CNTNAP3Q9BZ76 1288 aa33.84■■■■□ 3.01
CBX4-203ENST00000494546 ISCUQ9H1K1 167 aa33.84■■■■□ 3.01
CBX4-203ENST00000494546 NOL6Q9H6R4 1146 aaKnown RBP33.84■■■■□ 3.01
CBX4-203ENST00000494546 AP4E1Q9UPM8 1137 aa33.84■■■■□ 3.01
CBX4-203ENST00000494546 RNF8O76064 485 aa33.83■■■■□ 3.01
CBX4-203ENST00000494546 WNT1P04628 370 aa33.83■■■■□ 3.01
CBX4-203ENST00000494546 HNRNPDQ14103 355 aaKnown RBP33.83■■■■□ 3.01
CBX4-203ENST00000494546 VPS36Q86VN1 386 aa33.83■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms