RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 SRGAP2O75044 1071 aa12.93□□□□□ -0.34
SKA1-205ENST00000494518 ZIC2O95409 532 aaPredicted RBP12.93□□□□□ -0.34
SKA1-205ENST00000494518 CDK4P11802 303 aa12.93□□□□□ -0.34
SKA1-205ENST00000494518 DGKAP23743 735 aa12.93□□□□□ -0.34
SKA1-205ENST00000494518 NUDT1P36639 197 aa12.93□□□□□ -0.34
SKA1-205ENST00000494518 CXCR3P49682 368 aa12.93□□□□□ -0.34
SKA1-205ENST00000494518 CCDC173Q0VFZ6 552 aa12.93□□□□□ -0.34
SKA1-205ENST00000494518 KCNMA1Q12791 1236 aa12.93□□□□□ -0.34
SKA1-205ENST00000494518 OVGP1Q12889 678 aa12.93□□□□□ -0.34
SKA1-205ENST00000494518 RAPGEF1Q13905 1077 aa12.93□□□□□ -0.34
SKA1-205ENST00000494518 TPD52L1Q16890 204 aaPredicted RBP12.93□□□□□ -0.34
SKA1-205ENST00000494518 ZNF284Q2VY69 593 aa12.93□□□□□ -0.34
SKA1-205ENST00000494518 C5orf22Q49AR2 442 aa12.93□□□□□ -0.34
SKA1-205ENST00000494518 FAM102AQ5T9C2 384 aaPredicted RBP12.93□□□□□ -0.34
SKA1-205ENST00000494518 C22orf39Q6P5X5 142 aa12.93□□□□□ -0.34
SKA1-205ENST00000494518 GCNT7Q6ZNI0 430 aa12.93□□□□□ -0.34
SKA1-205ENST00000494518 LRRC69Q6ZNQ3 347 aa12.93□□□□□ -0.34
SKA1-205ENST00000494518 PTAR1Q7Z6K3 402 aaPredicted RBP12.93□□□□□ -0.34
SKA1-205ENST00000494518 HORMAD1Q86X24 394 aa12.93□□□□□ -0.34
SKA1-205ENST00000494518 ZNF683Q8IZ20 524 aa12.93□□□□□ -0.34
SKA1-205ENST00000494518 CCDC114Q96M63 670 aa12.93□□□□□ -0.34
SKA1-205ENST00000494518 C2orf49Q9BVC5 232 aaPredicted RBP12.93□□□□□ -0.34
SKA1-205ENST00000494518 KIAA1468Q9P260 1216 aa12.93□□□□□ -0.34
SKA1-205ENST00000494518 ZFR2Q9UPR6 939 aaKnown RBP12.93□□□□□ -0.34
SKA1-205ENST00000494518 PCDHB1Q9Y5F3 818 aa12.93□□□□□ -0.34
SKA1-205ENST00000494518 ACTL7AQ9Y615 435 aa12.93□□□□□ -0.34
SKA1-205ENST00000494518 FLNBO75369 2602 aaKnown RBP12.93□□□□□ -0.34
SKA1-205ENST00000494518 LEFTY1O75610 366 aa12.92□□□□□ -0.34
SKA1-205ENST00000494518 NEBLO76041 1014 aa12.92□□□□□ -0.34
SKA1-205ENST00000494518 MT-CO3P00414 261 aa12.92□□□□□ -0.34
SKA1-205ENST00000494518 ACP1P24666 158 aa12.92□□□□□ -0.34
SKA1-205ENST00000494518 AKT2P31751 481 aa12.92□□□□□ -0.34
SKA1-205ENST00000494518 FLT3P36888 993 aa12.92□□□□□ -0.34
SKA1-205ENST00000494518 DNA2P51530 1060 aa12.92□□□□□ -0.34
SKA1-205ENST00000494518 ATMQ13315 3056 aa12.92□□□□□ -0.34
SKA1-205ENST00000494518 ILKQ13418 452 aa12.92□□□□□ -0.34
SKA1-205ENST00000494518 RTP5Q14D33 572 aa12.92□□□□□ -0.34
SKA1-205ENST00000494518 LRRK1Q38SD2 2015 aa12.92□□□□□ -0.34
SKA1-205ENST00000494518 BRMS1LQ5PSV4 323 aa12.92□□□□□ -0.34
SKA1-205ENST00000494518 TRNP1Q6NT89 227 aa12.92□□□□□ -0.34
SKA1-205ENST00000494518 LRRC31Q6UY01 552 aa12.92□□□□□ -0.34
SKA1-205ENST00000494518 DPY19L3Q6ZPD9 716 aa12.92□□□□□ -0.34
SKA1-205ENST00000494518 ERN2Q76MJ5 926 aaKnown RBP12.92□□□□□ -0.34
SKA1-205ENST00000494518 SLC22A18ASQ8N1D0 253 aa12.92□□□□□ -0.34
SKA1-205ENST00000494518 DCAF4L2Q8NA75 395 aa12.92□□□□□ -0.34
SKA1-205ENST00000494518 ZNF397Q8NF99 534 aaPredicted RBP12.92□□□□□ -0.34
SKA1-205ENST00000494518 NAF1Q96HR8 494 aaKnown RBP12.92□□□□□ -0.34
SKA1-205ENST00000494518 FCRL3Q96P31 734 aaPredicted RBP12.92□□□□□ -0.34
SKA1-205ENST00000494518 NRSN2Q9GZP1 204 aa12.92□□□□□ -0.34
SKA1-205ENST00000494518 KLHL11Q9NVR0 708 aa12.92□□□□□ -0.34
SKA1-205ENST00000494518 IL36AQ9UHA7 158 aa12.92□□□□□ -0.34
SKA1-205ENST00000494518 STAP1Q9ULZ2 295 aa12.92□□□□□ -0.34
SKA1-205ENST00000494518 FHOD1Q9Y613 1164 aa12.92□□□□□ -0.34
SKA1-205ENST00000494518 ZNF462Q96JM2 2506 aa12.92□□□□□ -0.34
SKA1-205ENST00000494518 GTPBP10A4D1E9 387 aaKnown RBP12.91□□□□□ -0.34
SKA1-205ENST00000494518 PES1O00541 588 aaKnown RBP12.91□□□□□ -0.34
SKA1-205ENST00000494518 RAD51BO15315 384 aa12.91□□□□□ -0.34
SKA1-205ENST00000494518 RRP8O43159 456 aaKnown RBP12.91□□□□□ -0.34
SKA1-205ENST00000494518 PIAS2O75928 621 aa12.91□□□□□ -0.34
SKA1-205ENST00000494518 PRNPP04156 253 aa12.91□□□□□ -0.34
SKA1-205ENST00000494518 PRKCSHP14314 528 aaPredicted RBP12.91□□□□□ -0.34
SKA1-205ENST00000494518 HNRNPA2B1P22626 353 aaKnown RBP12.91□□□□□ -0.34
SKA1-205ENST00000494518 OR1E1P30953 314 aa12.91□□□□□ -0.34
SKA1-205ENST00000494518 GKP32189 559 aa12.91□□□□□ -0.34
SKA1-205ENST00000494518 RECQLP46063 649 aaPredicted RBP12.91□□□□□ -0.34
SKA1-205ENST00000494518 SNX16P57768 344 aa12.91□□□□□ -0.34
SKA1-205ENST00000494518 MTA1Q13330 715 aa12.91□□□□□ -0.34
SKA1-205ENST00000494518 ZNF211Q13398 564 aaPredicted RBP12.91□□□□□ -0.34
SKA1-205ENST00000494518 DRAP1Q14919 205 aaPredicted RBP12.91□□□□□ -0.34
SKA1-205ENST00000494518 MAN2A1Q16706 1144 aa12.91□□□□□ -0.34
SKA1-205ENST00000494518 RAB6CQ53S08 254 aa12.91□□□□□ -0.34
SKA1-205ENST00000494518 HS1BP3Q53T59 392 aa12.91□□□□□ -0.34
SKA1-205ENST00000494518 PHLDB2Q86SQ0 1253 aa12.91□□□□□ -0.34
SKA1-205ENST00000494518 FAM131BQ86XD5 332 aa12.91□□□□□ -0.34
SKA1-205ENST00000494518 XYLT1Q86Y38 959 aa12.91□□□□□ -0.34
SKA1-205ENST00000494518 DRC7Q8IY82 874 aa12.91□□□□□ -0.34
SKA1-205ENST00000494518 FAM71AQ8IYT1 594 aa12.91□□□□□ -0.34
SKA1-205ENST00000494518 DCBLD1Q8N8Z6 715 aa12.91□□□□□ -0.34
SKA1-205ENST00000494518 TMEM35BQ8NCS4 154 aa12.91□□□□□ -0.34
SKA1-205ENST00000494518 TMIEQ8NEW7 156 aa12.91□□□□□ -0.34
SKA1-205ENST00000494518 OR6K2Q8NGY2 324 aa12.91□□□□□ -0.34
SKA1-205ENST00000494518 OR4C6Q8NH72 309 aa12.91□□□□□ -0.34
SKA1-205ENST00000494518 BAP1Q92560 729 aa12.91□□□□□ -0.34
SKA1-205ENST00000494518 CFAP57Q96MR6 1250 aa12.91□□□□□ -0.34
SKA1-205ENST00000494518 RAB6CQ9H0N0 254 aa12.91□□□□□ -0.34
SKA1-205ENST00000494518 OSBPL2Q9H1P3 480 aa12.91□□□□□ -0.34
SKA1-205ENST00000494518 PRORYQ9H606 182 aa12.91□□□□□ -0.34
SKA1-205ENST00000494518 ZDHHC6Q9H6R6 413 aa12.91□□□□□ -0.34
SKA1-205ENST00000494518 ATP13A1Q9HD20 1204 aa12.91□□□□□ -0.34
SKA1-205ENST00000494518 DNAJC28Q9NX36 388 aa12.91□□□□□ -0.34
SKA1-205ENST00000494518 FCF1Q9Y324 198 aaKnown RBP12.91□□□□□ -0.34
SKA1-205ENST00000494518 WASF2Q9Y6W5 498 aa12.91□□□□□ -0.34
SKA1-205ENST00000494518 COL27A1Q8IZC6 1860 aaPredicted RBP12.91□□□□□ -0.34
SKA1-205ENST00000494518 POM121BA6NF01 834 aa12.9□□□□□ -0.34
SKA1-205ENST00000494518 DRGXA6NNA5 263 aa12.9□□□□□ -0.34
SKA1-205ENST00000494518 ZNF821O75541 412 aaPredicted RBP12.9□□□□□ -0.34
SKA1-205ENST00000494518 MPOP05164 745 aa12.9□□□□□ -0.34
SKA1-205ENST00000494518 GIMD1P0DJR0 217 aa12.9□□□□□ -0.34
SKA1-205ENST00000494518 CYP11B1P15538 503 aa12.9□□□□□ -0.34
SKA1-205ENST00000494518 ARF5P84085 180 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms