RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 KCNA4P22459 653 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 CD27P26842 260 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 CASQ1P31415 396 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 DRD3P35462 400 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 GRIA4P48058 902 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 MAPKAPK2P49137 400 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 AFF3P51826 1226 aaKnown RBP13.49□□□□□ -0.25
ERCC3-209ENST00000494464 GALCP54803 685 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 ADPRHP54922 357 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 AIF1P55008 147 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 SLC14A1Q13336 389 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 DLG2Q15700 870 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 ACCSLQ4AC99 568 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 FAM46CQ5VWP2 391 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 KIAA1328Q86T90 577 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 NLRP14Q86W24 1093 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 CCDC185Q8N715 623 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 OR2T34Q8NGX1 318 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 GANCQ8TET4 914 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 CCDC114Q96M63 670 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 WDR24Q96S15 920 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 ORAI3Q9BRQ5 295 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 NEUROG2Q9H2A3 272 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 DEF6Q9H4E7 631 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 TMEM248Q9NWD8 314 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 CNOT1A5YKK6 2376 aaKnown RBP13.49□□□□□ -0.25
ERCC3-209ENST00000494464 A0A0U1RQJ8 604 aa13.48□□□□□ -0.25
ERCC3-209ENST00000494464 SLC7A4O43246 635 aa13.48□□□□□ -0.25
ERCC3-209ENST00000494464 KRT86O43790 486 aa13.48□□□□□ -0.25
ERCC3-209ENST00000494464 AKR1B10O60218 316 aa13.48□□□□□ -0.25
ERCC3-209ENST00000494464 LRIG2O94898 1065 aa13.48□□□□□ -0.25
ERCC3-209ENST00000494464 CER1O95813 267 aa13.48□□□□□ -0.25
ERCC3-209ENST00000494464 PLEKP08567 350 aaPredicted RBP13.48□□□□□ -0.25
ERCC3-209ENST00000494464 GZMAP12544 262 aa13.48□□□□□ -0.25
ERCC3-209ENST00000494464 RRM1P23921 792 aa13.48□□□□□ -0.25
ERCC3-209ENST00000494464 ETFBP38117 255 aa13.48□□□□□ -0.25
ERCC3-209ENST00000494464 RPL7AP62424 266 aaKnown RBP13.48□□□□□ -0.25
ERCC3-209ENST00000494464 GNA12Q03113 381 aa13.48□□□□□ -0.25
ERCC3-209ENST00000494464 TDRD12Q587J7 1177 aaKnown RBP13.48□□□□□ -0.25
ERCC3-209ENST00000494464 RETSATQ6NUM9 610 aa13.48□□□□□ -0.25
ERCC3-209ENST00000494464 NCEH1Q6PIU2 408 aa13.48□□□□□ -0.25
ERCC3-209ENST00000494464 IL27RAQ6UWB1 636 aa13.48□□□□□ -0.25
ERCC3-209ENST00000494464 PIP4P1Q86T03 277 aa13.48□□□□□ -0.25
ERCC3-209ENST00000494464 ATP11CQ8NB49 1132 aa13.48□□□□□ -0.25
ERCC3-209ENST00000494464 OR7D4Q8NG98 312 aa13.48□□□□□ -0.25
ERCC3-209ENST00000494464 TBC1D31Q96DN5 1066 aa13.48□□□□□ -0.25
ERCC3-209ENST00000494464 CNPY3Q9BT09 278 aa13.48□□□□□ -0.25
ERCC3-209ENST00000494464 KDM4CQ9H3R0 1056 aa13.48□□□□□ -0.25
ERCC3-209ENST00000494464 ATP13A1Q9HD20 1204 aa13.48□□□□□ -0.25
ERCC3-209ENST00000494464 TM9SF3Q9HD45 589 aa13.48□□□□□ -0.25
ERCC3-209ENST00000494464 LUC7LQ9NQ29 371 aaKnown RBP13.48□□□□□ -0.25
ERCC3-209ENST00000494464 TAS2R14Q9NYV8 317 aa13.48□□□□□ -0.25
ERCC3-209ENST00000494464 PPM1HQ9ULR3 514 aa13.48□□□□□ -0.25
ERCC3-209ENST00000494464 SPTBN2O15020 2390 aa13.48□□□□□ -0.25
ERCC3-209ENST00000494464 TMEM131Q92545 1883 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 A0A1W2PPC4 97 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 FAM72CH0Y354 149 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 PJA2O43164 708 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 ZMPSTE24O75844 475 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 FSBPO95073 299 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 MT-CO1P00395 513 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 ZNF883P0CG24 379 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 DESP17661 470 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 GLDCP23378 1020 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 PMLP29590 882 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 L1CAMP32004 1257 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 SERPINH1P50454 418 aaKnown RBP13.47□□□□□ -0.25
ERCC3-209ENST00000494464 CCR5P51681 352 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 ARF5P84085 180 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 BNC1Q01954 994 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 SLC20A2Q08357 652 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 KLHL30Q0D2K2 578 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 TUBB2AQ13885 445 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 TEAD4Q15561 434 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 EFHC2Q5JST6 749 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 N4BP2L1Q5TBK1 243 aaPredicted RBP13.47□□□□□ -0.25
ERCC3-209ENST00000494464 FAM72AQ5TYM5 149 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 PLEKHA7Q6IQ23 1121 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 FAM72DQ6L9T8 149 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 C22orf39Q6P5X5 142 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 DCUN1D2Q6PH85 259 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 ZNF571Q7Z3V5 609 aaPredicted RBP13.47□□□□□ -0.25
ERCC3-209ENST00000494464 SLFN11Q7Z7L1 901 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 FAM72BQ86X60 149 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 OR2A12Q8NGT7 310 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 OR2I1PQ8NGU4 316 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 PIP4K2CQ8TBX8 421 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 TUBB2BQ9BVA1 445 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 ACE2Q9BYF1 805 aaPredicted RBP13.47□□□□□ -0.25
ERCC3-209ENST00000494464 CEP44Q9C0F1 390 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 SLC32A1Q9H598 525 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 PARVAQ9NVD7 372 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 SARDHQ9UL12 918 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 FARP1Q9Y4F1 1045 aaPredicted RBP13.47□□□□□ -0.25
ERCC3-209ENST00000494464 SLCO1B1Q9Y6L6 691 aa13.47□□□□□ -0.25
ERCC3-209ENST00000494464 FAM47DPA6NHR8 397 aa13.46□□□□□ -0.25
ERCC3-209ENST00000494464 K7ERQ8 282 aa13.46□□□□□ -0.25
ERCC3-209ENST00000494464 CBX4O00257 560 aa13.46□□□□□ -0.25
ERCC3-209ENST00000494464 GIPC1O14908 333 aa13.46□□□□□ -0.25
ERCC3-209ENST00000494464 SMAD6O43541 496 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms