RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 IP6K1Q92551 441 aa6.56□□□□□ -1.36
SMC2-205ENST00000493955 FRG2BQ96QU4 278 aa6.56□□□□□ -1.36
SMC2-205ENST00000493955 IFT27Q9BW83 186 aa6.56□□□□□ -1.36
SMC2-205ENST00000493955 FTOQ9C0B1 505 aaKnown RBP eCLIP6.56□□□□□ -1.36
SMC2-205ENST00000493955 SH3BP4Q9P0V3 963 aa6.56□□□□□ -1.36
SMC2-205ENST00000493955 KIAA1456Q9P272 454 aa6.56□□□□□ -1.36
SMC2-205ENST00000493955 TMEM5Q9Y2B1 443 aa6.56□□□□□ -1.36
SMC2-205ENST00000493955 CLDN16Q9Y5I7 305 aa6.56□□□□□ -1.36
SMC2-205ENST00000493955 SNX8Q9Y5X2 465 aa6.56□□□□□ -1.36
SMC2-205ENST00000493955 POLR2AP24928 1970 aaKnown RBP6.55□□□□□ -1.36
SMC2-205ENST00000493955 MGST3O14880 152 aa6.55□□□□□ -1.36
SMC2-205ENST00000493955 SERPINC1P01008 464 aa6.55□□□□□ -1.36
SMC2-205ENST00000493955 EIF2S1P05198 315 aaKnown RBP6.55□□□□□ -1.36
SMC2-205ENST00000493955 CHRM5P08912 532 aaPredicted RBP6.55□□□□□ -1.36
SMC2-205ENST00000493955 CDH2P19022 906 aaPredicted RBP6.55□□□□□ -1.36
SMC2-205ENST00000493955 POU1F1P28069 291 aa6.55□□□□□ -1.36
SMC2-205ENST00000493955 SOX10P56693 466 aa6.55□□□□□ -1.36
SMC2-205ENST00000493955 PUM1Q14671 1186 aaKnown RBP eCLIP6.55□□□□□ -1.36
SMC2-205ENST00000493955 VWA5B1Q5TIE3 1220 aa6.55□□□□□ -1.36
SMC2-205ENST00000493955 CYP20A1Q6UW02 462 aa6.55□□□□□ -1.36
SMC2-205ENST00000493955 PRSS45Q7RTY3 260 aa6.55□□□□□ -1.36
SMC2-205ENST00000493955 PRRT2Q7Z6L0 340 aaPredicted RBP6.55□□□□□ -1.36
SMC2-205ENST00000493955 FAM160B2Q86V87 743 aa6.55□□□□□ -1.36
SMC2-205ENST00000493955 WDTC1Q8N5D0 677 aa6.55□□□□□ -1.36
SMC2-205ENST00000493955 FAM47BQ8NA70 645 aa6.55□□□□□ -1.36
SMC2-205ENST00000493955 TMEM116Q8NCL8 245 aa6.55□□□□□ -1.36
SMC2-205ENST00000493955 ARHGEF2Q92974 986 aaKnown RBP6.55□□□□□ -1.36
SMC2-205ENST00000493955 SMARCE1Q969G3 411 aa6.55□□□□□ -1.36
SMC2-205ENST00000493955 FAM149B1Q96BN6 582 aa6.55□□□□□ -1.36
SMC2-205ENST00000493955 CALML4Q96GE6 196 aa6.55□□□□□ -1.36
SMC2-205ENST00000493955 FCRL5Q96RD9 977 aa6.55□□□□□ -1.36
SMC2-205ENST00000493955 FRMD8Q9BZ67 464 aaPredicted RBP6.55□□□□□ -1.36
SMC2-205ENST00000493955 SNTG1Q9NSN8 517 aa6.55□□□□□ -1.36
SMC2-205ENST00000493955 BABAM1Q9NWV8 329 aa6.55□□□□□ -1.36
SMC2-205ENST00000493955 FBXO40Q9UH90 709 aa6.55□□□□□ -1.36
SMC2-205ENST00000493955 PCDHGB4Q9UN71 923 aa6.55□□□□□ -1.36
SMC2-205ENST00000493955 ICKQ9UPZ9 632 aa6.55□□□□□ -1.36
SMC2-205ENST00000493955 ARHGAP10A1A4S6 786 aa6.54□□□□□ -1.36
SMC2-205ENST00000493955 TTC36A6NLP5 189 aa6.54□□□□□ -1.36
SMC2-205ENST00000493955 ZNF8P17098 575 aaPredicted RBP6.54□□□□□ -1.36
SMC2-205ENST00000493955 TACR3P29371 465 aa6.54□□□□□ -1.36
SMC2-205ENST00000493955 PLA2G5P39877 138 aa6.54□□□□□ -1.36
SMC2-205ENST00000493955 CYP2J2P51589 502 aa6.54□□□□□ -1.36
SMC2-205ENST00000493955 EFNA5P52803 228 aa6.54□□□□□ -1.36
SMC2-205ENST00000493955 SNX16P57768 344 aa6.54□□□□□ -1.36
SMC2-205ENST00000493955 CYP4A11Q02928 519 aa6.54□□□□□ -1.36
SMC2-205ENST00000493955 GSTA3Q16772 222 aa6.54□□□□□ -1.36
SMC2-205ENST00000493955 EDRF1Q3B7T1 1238 aa6.54□□□□□ -1.36
SMC2-205ENST00000493955 FAM133BQ5BKY9 247 aaKnown RBP6.54□□□□□ -1.36
SMC2-205ENST00000493955 SERTAD4-AS1Q5TG53 156 aa6.54□□□□□ -1.36
SMC2-205ENST00000493955 ATG9BQ674R7 924 aa6.54□□□□□ -1.36
SMC2-205ENST00000493955 TTI2Q6NXR4 508 aa6.54□□□□□ -1.36
SMC2-205ENST00000493955 RBM44Q6ZP01 1051 aaKnown RBP6.54□□□□□ -1.36
SMC2-205ENST00000493955 CAGE1Q8TC20 777 aa6.54□□□□□ -1.36
SMC2-205ENST00000493955 PIGKQ92643 395 aa6.54□□□□□ -1.36
SMC2-205ENST00000493955 KAT2BQ92831 832 aa6.54□□□□□ -1.36
SMC2-205ENST00000493955 TEFMQ96QE5 360 aaKnown RBP6.54□□□□□ -1.36
SMC2-205ENST00000493955 ZNF341Q9BYN7 854 aa6.54□□□□□ -1.36
SMC2-205ENST00000493955 ATP8A2Q9NTI2 1148 aa6.54□□□□□ -1.36
SMC2-205ENST00000493955 NLKQ9UBE8 527 aa6.54□□□□□ -1.36
SMC2-205ENST00000493955 SLC8A2Q9UPR5 921 aa6.54□□□□□ -1.36
SMC2-205ENST00000493955 FAM237BA0A1B0GVD1 139 aa6.53□□□□□ -1.36
SMC2-205ENST00000493955 MYO1GB0I1T2 1018 aa6.53□□□□□ -1.36
SMC2-205ENST00000493955 TARM1B6A8C7 271 aa6.53□□□□□ -1.36
SMC2-205ENST00000493955 BCAT2O15382 392 aaPredicted RBP6.53□□□□□ -1.36
SMC2-205ENST00000493955 P4HA2O15460 535 aa6.53□□□□□ -1.36
SMC2-205ENST00000493955 NARSO43776 548 aaKnown RBP6.53□□□□□ -1.36
SMC2-205ENST00000493955 GJB3O75712 270 aa6.53□□□□□ -1.36
SMC2-205ENST00000493955 DDAH2O95865 285 aa6.53□□□□□ -1.36
SMC2-205ENST00000493955 ST6GAL1P15907 406 aa6.53□□□□□ -1.36
SMC2-205ENST00000493955 TTKP33981 857 aa6.53□□□□□ -1.36
SMC2-205ENST00000493955 POU5F1Q01860 360 aaKnown RBP6.53□□□□□ -1.36
SMC2-205ENST00000493955 EPS8Q12929 822 aa6.53□□□□□ -1.36
SMC2-205ENST00000493955 MTA1Q13330 715 aa6.53□□□□□ -1.36
SMC2-205ENST00000493955 PLK5Q496M5 336 aa6.53□□□□□ -1.36
SMC2-205ENST00000493955 CERKLQ49MI3 558 aaPredicted RBP6.53□□□□□ -1.36
SMC2-205ENST00000493955 TMEM154Q6P9G4 183 aa6.53□□□□□ -1.36
SMC2-205ENST00000493955 MOB3CQ70IA8 216 aa6.53□□□□□ -1.36
SMC2-205ENST00000493955 TMEM217Q8N7C4 229 aa6.53□□□□□ -1.36
SMC2-205ENST00000493955 NEK9Q8TD19 979 aa6.53□□□□□ -1.36
SMC2-205ENST00000493955 POMGNT1Q8WZA1 660 aa6.53□□□□□ -1.36
SMC2-205ENST00000493955 FEM1CQ96JP0 617 aa6.53□□□□□ -1.36
SMC2-205ENST00000493955 UROC1Q96N76 676 aa6.53□□□□□ -1.36
SMC2-205ENST00000493955 TIMP4Q99727 224 aa6.53□□□□□ -1.36
SMC2-205ENST00000493955 STRA6Q9BX79 667 aa6.53□□□□□ -1.36
SMC2-205ENST00000493955 TOR3AQ9H497 397 aa6.53□□□□□ -1.36
SMC2-205ENST00000493955 SCPEP1Q9HB40 452 aa6.53□□□□□ -1.36
SMC2-205ENST00000493955 GRHL1Q9NZI5 618 aa6.53□□□□□ -1.36
SMC2-205ENST00000493955 NCKIPSDQ9NZQ3 722 aa6.53□□□□□ -1.36
SMC2-205ENST00000493955 SLC17A6Q9P2U8 582 aa6.53□□□□□ -1.36
SMC2-205ENST00000493955 RPS6KA6Q9UK32 745 aa6.53□□□□□ -1.36
SMC2-205ENST00000493955 ADAM21Q9UKJ8 722 aa6.53□□□□□ -1.36
SMC2-205ENST00000493955 MKLN1Q9UL63 735 aa6.53□□□□□ -1.36
SMC2-205ENST00000493955 CAPN7Q9Y6W3 813 aa6.53□□□□□ -1.36
SMC2-205ENST00000493955 SYNDIG1LA6NDD5 238 aa6.52□□□□□ -1.37
SMC2-205ENST00000493955 MSI1O43347 362 aaKnown RBP6.52□□□□□ -1.37
SMC2-205ENST00000493955 HNRNPCL1O60812 293 aaKnown RBP6.52□□□□□ -1.37
SMC2-205ENST00000493955 RARGP13631 454 aa6.52□□□□□ -1.37
SMC2-205ENST00000493955 WT1P19544 449 aaPredicted RBP6.52□□□□□ -1.37
SMC2-205ENST00000493955 ACSL1P33121 698 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms