RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 YBEYP58557 167 aaPredicted RBP16.48■□□□□ 0.23
SATB1-217ENST00000493952 IRX4P78413 519 aa16.48■□□□□ 0.23
SATB1-217ENST00000493952 SFSWAPQ12872 951 aaKnown RBP16.48■□□□□ 0.23
SATB1-217ENST00000493952 DPYSL2Q16555 572 aa16.48■□□□□ 0.23
SATB1-217ENST00000493952 WDR45BQ5MNZ6 344 aa16.48■□□□□ 0.23
SATB1-217ENST00000493952 SYCP2LQ5T4T6 812 aa16.48■□□□□ 0.23
SATB1-217ENST00000493952 LEKR1Q6ZMV7 388 aa16.48■□□□□ 0.23
SATB1-217ENST00000493952 RFX8Q6ZV50 586 aa16.48■□□□□ 0.23
SATB1-217ENST00000493952 ZNF354CQ86Y25 554 aa16.48■□□□□ 0.23
SATB1-217ENST00000493952 CPNE8Q86YQ8 564 aa16.48■□□□□ 0.23
SATB1-217ENST00000493952 CHST14Q8NCH0 376 aa16.48■□□□□ 0.23
SATB1-217ENST00000493952 DNASE2BQ8WZ79 361 aa16.48■□□□□ 0.23
SATB1-217ENST00000493952 HSPH1Q92598 858 aa16.48■□□□□ 0.23
SATB1-217ENST00000493952 HMCESQ96FZ2 354 aa16.48■□□□□ 0.23
SATB1-217ENST00000493952 CCDC114Q96M63 670 aa16.48■□□□□ 0.23
SATB1-217ENST00000493952 CEP44Q9C0F1 390 aa16.48■□□□□ 0.23
SATB1-217ENST00000493952 KLC2Q9H0B6 622 aa16.48■□□□□ 0.23
SATB1-217ENST00000493952 PCED1AQ9H1Q7 454 aa16.48■□□□□ 0.23
SATB1-217ENST00000493952 NEUROG2Q9H2A3 272 aa16.48■□□□□ 0.23
SATB1-217ENST00000493952 OSGEPQ9NPF4 335 aa16.48■□□□□ 0.23
SATB1-217ENST00000493952 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.48■□□□□ 0.23
SATB1-217ENST00000493952 CWC15Q9P013 229 aaKnown RBP16.48■□□□□ 0.23
SATB1-217ENST00000493952 UVRAGQ9P2Y5 699 aa16.48■□□□□ 0.23
SATB1-217ENST00000493952 EVLQ9UI08 416 aaPredicted RBP16.48■□□□□ 0.23
SATB1-217ENST00000493952 HPCAL4Q9UM19 191 aa16.48■□□□□ 0.23
SATB1-217ENST00000493952 DNAH14Q0VDD8 3507 aa16.48■□□□□ 0.23
SATB1-217ENST00000493952 DCHS1Q96JQ0 3298 aa16.48■□□□□ 0.23
SATB1-217ENST00000493952 C1QTNF3-AMACRE9PGA6 284 aa16.47■□□□□ 0.23
SATB1-217ENST00000493952 RNF103O00237 685 aa16.47■□□□□ 0.23
SATB1-217ENST00000493952 PROSCO94903 275 aa16.47■□□□□ 0.23
SATB1-217ENST00000493952 ERCC2P18074 760 aa16.47■□□□□ 0.23
SATB1-217ENST00000493952 CHRNA3P32297 505 aa16.47■□□□□ 0.23
SATB1-217ENST00000493952 ID4P47928 161 aa16.47■□□□□ 0.23
SATB1-217ENST00000493952 ZNF135P52742 658 aaPredicted RBP16.47■□□□□ 0.23
SATB1-217ENST00000493952 GEMIN4P57678 1058 aaKnown RBP16.47■□□□□ 0.23
SATB1-217ENST00000493952 POM121L1PQ3SYA9 428 aa16.47■□□□□ 0.23
SATB1-217ENST00000493952 PARP15Q460N3 678 aa16.47■□□□□ 0.23
SATB1-217ENST00000493952 BOLA3Q53S33 107 aa16.47■□□□□ 0.23
SATB1-217ENST00000493952 FAM46CQ5VWP2 391 aa16.47■□□□□ 0.23
SATB1-217ENST00000493952 SLC23A3Q6PIS1 610 aa16.47■□□□□ 0.23
SATB1-217ENST00000493952 DPY19L3Q6ZPD9 716 aa16.47■□□□□ 0.23
SATB1-217ENST00000493952 PCDH20Q8N6Y1 951 aaKnown RBP16.47■□□□□ 0.23
SATB1-217ENST00000493952 GRIN3AQ8TCU5 1115 aa16.47■□□□□ 0.23
SATB1-217ENST00000493952 NETO1Q8TDF5 533 aa16.47■□□□□ 0.23
SATB1-217ENST00000493952 TEKT4Q8WW24 435 aa16.47■□□□□ 0.23
SATB1-217ENST00000493952 FAM131CQ96AQ9 280 aa16.47■□□□□ 0.23
SATB1-217ENST00000493952 CELF6Q96J87 481 aaKnown RBP16.47■□□□□ 0.23
SATB1-217ENST00000493952 EDEM2Q9BV94 578 aa16.47■□□□□ 0.23
SATB1-217ENST00000493952 LRRC19Q9H756 370 aa16.47■□□□□ 0.23
SATB1-217ENST00000493952 EIF2B4Q9UI10 523 aaKnown RBP16.47■□□□□ 0.23
SATB1-217ENST00000493952 CDV3Q9UKY7 258 aaKnown RBP16.47■□□□□ 0.23
SATB1-217ENST00000493952 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.47■□□□□ 0.23
SATB1-217ENST00000493952 LAMA1P25391 3075 aa16.46■□□□□ 0.23
SATB1-217ENST00000493952 DAPK3O43293 454 aa16.46■□□□□ 0.23
SATB1-217ENST00000493952 CFIP05156 583 aa16.46■□□□□ 0.23
SATB1-217ENST00000493952 RECQLP46063 649 aaPredicted RBP16.46■□□□□ 0.23
SATB1-217ENST00000493952 HCAR3P49019 387 aa16.46■□□□□ 0.23
SATB1-217ENST00000493952 DNA2P51530 1060 aa16.46■□□□□ 0.23
SATB1-217ENST00000493952 LIMK1P53667 647 aa16.46■□□□□ 0.23
SATB1-217ENST00000493952 ADPRHP54922 357 aa16.46■□□□□ 0.23
SATB1-217ENST00000493952 CNTN1Q12860 1018 aa16.46■□□□□ 0.23
SATB1-217ENST00000493952 SERINC3Q13530 473 aa16.46■□□□□ 0.23
SATB1-217ENST00000493952 DPYSQ14117 519 aa16.46■□□□□ 0.23
SATB1-217ENST00000493952 DUOXA1Q1HG43 343 aa16.46■□□□□ 0.23
SATB1-217ENST00000493952 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.46■□□□□ 0.23
SATB1-217ENST00000493952 ZCCHC9Q8N567 271 aaKnown RBP16.46■□□□□ 0.23
SATB1-217ENST00000493952 NPWQ8N729 165 aa16.46■□□□□ 0.23
SATB1-217ENST00000493952 NETO2Q8NC67 525 aa16.46■□□□□ 0.23
SATB1-217ENST00000493952 SNX19Q92543 992 aa16.46■□□□□ 0.23
SATB1-217ENST00000493952 BIRC7Q96CA5 298 aa16.46■□□□□ 0.23
SATB1-217ENST00000493952 TM6SF2Q9BZW4 377 aa16.46■□□□□ 0.23
SATB1-217ENST00000493952 SLC39A8Q9C0K1 460 aa16.46■□□□□ 0.23
SATB1-217ENST00000493952 MIR1-1HGQ9H1L0 117 aa16.46■□□□□ 0.23
SATB1-217ENST00000493952 FSCN3Q9NQT6 498 aa16.46■□□□□ 0.23
SATB1-217ENST00000493952 DLL3Q9NYJ7 618 aa16.46■□□□□ 0.23
SATB1-217ENST00000493952 IL36AQ9UHA7 158 aa16.46■□□□□ 0.23
SATB1-217ENST00000493952 SLC6A14Q9UN76 642 aa16.46■□□□□ 0.23
SATB1-217ENST00000493952 FARP1Q9Y4F1 1045 aaPredicted RBP16.46■□□□□ 0.23
SATB1-217ENST00000493952 SLCO1B1Q9Y6L6 691 aa16.46■□□□□ 0.23
SATB1-217ENST00000493952 WASF2Q9Y6W5 498 aa16.46■□□□□ 0.23
SATB1-217ENST00000493952 ZSCAN5CA6NGD5 496 aaPredicted RBP16.45■□□□□ 0.22
SATB1-217ENST00000493952 FAM47DPA6NHR8 397 aa16.45■□□□□ 0.22
SATB1-217ENST00000493952 H3BRJ5 948 aa16.45■□□□□ 0.22
SATB1-217ENST00000493952 KPNA3O00505 521 aaPredicted RBP16.45■□□□□ 0.22
SATB1-217ENST00000493952 BUB1O43683 1085 aa16.45■□□□□ 0.22
SATB1-217ENST00000493952 TMCC1O94876 653 aa16.45■□□□□ 0.22
SATB1-217ENST00000493952 FSBPO95073 299 aa16.45■□□□□ 0.22
SATB1-217ENST00000493952 IGHV4-34P06331 123 aa16.45■□□□□ 0.22
SATB1-217ENST00000493952 SERPINF2P08697 491 aa16.45■□□□□ 0.22
SATB1-217ENST00000493952 ARL4AP40617 200 aa16.45■□□□□ 0.22
SATB1-217ENST00000493952 SSR1P43307 286 aaKnown RBP16.45■□□□□ 0.22
SATB1-217ENST00000493952 CCNHP51946 323 aaPredicted RBP16.45■□□□□ 0.22
SATB1-217ENST00000493952 NDST2P52849 883 aa16.45■□□□□ 0.22
SATB1-217ENST00000493952 CARD16Q5EG05 197 aa16.45■□□□□ 0.22
SATB1-217ENST00000493952 ARSIQ5FYB1 569 aa16.45■□□□□ 0.22
SATB1-217ENST00000493952 AGBL4Q5VU57 503 aa16.45■□□□□ 0.22
SATB1-217ENST00000493952 AFMIDQ63HM1 303 aa16.45■□□□□ 0.22
SATB1-217ENST00000493952 NCEH1Q6PIU2 408 aa16.45■□□□□ 0.22
SATB1-217ENST00000493952 POLNQ7Z5Q5 900 aa16.45■□□□□ 0.22
SATB1-217ENST00000493952 RABEPKQ7Z6M1 372 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms