RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 PDFQ9HBH1 243 aa15.19■□□□□ 0.02
ACTB-213ENST00000493945 THAP10Q9P2Z0 257 aaPredicted RBP15.19■□□□□ 0.02
ACTB-213ENST00000493945 DRG1Q9Y295 367 aaKnown RBP15.19■□□□□ 0.02
ACTB-213ENST00000493945 TTLL3Q9Y4R7 772 aa15.19■□□□□ 0.02
ACTB-213ENST00000493945 MRFAP1Q9Y605 127 aa15.19■□□□□ 0.02
ACTB-213ENST00000493945 TARSL2A2RTX5 802 aaKnown RBP15.18■□□□□ 0.02
ACTB-213ENST00000493945 CTAGE15A4D2H0 777 aa15.18■□□□□ 0.02
ACTB-213ENST00000493945 FAM170BA6NMN3 283 aa15.18■□□□□ 0.02
ACTB-213ENST00000493945 KCNN4O15554 427 aa15.18■□□□□ 0.02
ACTB-213ENST00000493945 ATP9BO43861 1147 aa15.18■□□□□ 0.02
ACTB-213ENST00000493945 OPHN1O60890 802 aa15.18■□□□□ 0.02
ACTB-213ENST00000493945 ZMPSTE24O75844 475 aa15.18■□□□□ 0.02
ACTB-213ENST00000493945 TMCC1O94876 653 aa15.18■□□□□ 0.02
ACTB-213ENST00000493945 GSRP00390 522 aa15.18■□□□□ 0.02
ACTB-213ENST00000493945 EGFP01133 1207 aa15.18■□□□□ 0.02
ACTB-213ENST00000493945 CTAGE8P0CG41 777 aa15.18■□□□□ 0.02
ACTB-213ENST00000493945 NFKBIAP25963 317 aa15.18■□□□□ 0.02
ACTB-213ENST00000493945 TIE1P35590 1138 aa15.18■□□□□ 0.02
ACTB-213ENST00000493945 SEC13P55735 322 aa15.18■□□□□ 0.02
ACTB-213ENST00000493945 ADCY2Q08462 1091 aa15.18■□□□□ 0.02
ACTB-213ENST00000493945 SLC10A2Q12908 348 aaPredicted RBP15.18■□□□□ 0.02
ACTB-213ENST00000493945 CCINQ13939 588 aa15.18■□□□□ 0.02
ACTB-213ENST00000493945 PRPSAP1Q14558 356 aa15.18■□□□□ 0.02
ACTB-213ENST00000493945 ZNF234Q14588 700 aa15.18■□□□□ 0.02
ACTB-213ENST00000493945 CYP1B1Q16678 543 aa15.18■□□□□ 0.02
ACTB-213ENST00000493945 CCDC137Q6PK04 289 aaKnown RBP15.18■□□□□ 0.02
ACTB-213ENST00000493945 ARHGEF18Q6ZSZ5 1173 aa15.18■□□□□ 0.02
ACTB-213ENST00000493945 TRIM67Q6ZTA4 783 aa15.18■□□□□ 0.02
ACTB-213ENST00000493945 CTAGE6Q86UF2 777 aa15.18■□□□□ 0.02
ACTB-213ENST00000493945 CTAGE4Q8IX94 777 aa15.18■□□□□ 0.02
ACTB-213ENST00000493945 PAF1Q8N7H5 531 aa15.18■□□□□ 0.02
ACTB-213ENST00000493945 ATL2Q8NHH9 583 aa15.18■□□□□ 0.02
ACTB-213ENST00000493945 CYB5D2Q8WUJ1 264 aa15.18■□□□□ 0.02
ACTB-213ENST00000493945 C1orf54Q8WWF1 131 aa15.18■□□□□ 0.02
ACTB-213ENST00000493945 MAML1Q92585 1016 aa15.18■□□□□ 0.02
ACTB-213ENST00000493945 P2RY11Q96G91 374 aa15.18■□□□□ 0.02
ACTB-213ENST00000493945 LGMNQ99538 433 aa15.18■□□□□ 0.02
ACTB-213ENST00000493945 AP1M1Q9BXS5 423 aa15.18■□□□□ 0.02
ACTB-213ENST00000493945 SAE1Q9UBE0 346 aaPredicted RBP15.18■□□□□ 0.02
ACTB-213ENST00000493945 SPTBN5Q9NRC6 3674 aaKnown RBP15.18■□□□□ 0.02
ACTB-213ENST00000493945 MYO18AQ92614 2054 aaKnown RBP15.17■□□□□ 0.02
ACTB-213ENST00000493945 KRBA1A5PL33 1030 aa15.17■□□□□ 0.02
ACTB-213ENST00000493945 J3KR12 359 aa15.17■□□□□ 0.02
ACTB-213ENST00000493945 K7EQS6 105 aa15.17■□□□□ 0.02
ACTB-213ENST00000493945 RNF103O00237 685 aa15.17■□□□□ 0.02
ACTB-213ENST00000493945 TRIM24O15164 1050 aa15.17■□□□□ 0.02
ACTB-213ENST00000493945 ALOX15BO15296 676 aa15.17■□□□□ 0.02
ACTB-213ENST00000493945 RNF40O75150 1001 aa15.17■□□□□ 0.02
ACTB-213ENST00000493945 ECEL1O95672 775 aa15.17■□□□□ 0.02
ACTB-213ENST00000493945 EPHX1P07099 455 aa15.17■□□□□ 0.02
ACTB-213ENST00000493945 SRCP12931 536 aa15.17■□□□□ 0.02
ACTB-213ENST00000493945 HOXB2P14652 356 aa15.17■□□□□ 0.02
ACTB-213ENST00000493945 TARSP26639 723 aaKnown RBP15.17■□□□□ 0.02
ACTB-213ENST00000493945 RPS9P46781 194 aaKnown RBP15.17■□□□□ 0.02
ACTB-213ENST00000493945 AP1S1P61966 158 aa15.17■□□□□ 0.02
ACTB-213ENST00000493945 ITKQ08881 620 aa15.17■□□□□ 0.02
ACTB-213ENST00000493945 CCDC15Q0P6D6 951 aa15.17■□□□□ 0.02
ACTB-213ENST00000493945 DHX34Q14147 1143 aaKnown RBP15.17■□□□□ 0.02
ACTB-213ENST00000493945 ELAVL3Q14576 367 aaKnown RBP15.17■□□□□ 0.02
ACTB-213ENST00000493945 DLG2Q15700 870 aa15.17■□□□□ 0.02
ACTB-213ENST00000493945 HNRNPA1L2Q32P51 320 aaKnown RBP15.17■□□□□ 0.02
ACTB-213ENST00000493945 C2orf27AQ580R0 203 aa15.17■□□□□ 0.02
ACTB-213ENST00000493945 CFAP58Q5T655 872 aa15.17■□□□□ 0.02
ACTB-213ENST00000493945 LINGO4Q6UY18 593 aa15.17■□□□□ 0.02
ACTB-213ENST00000493945 SYDE1Q6ZW31 735 aaPredicted RBP15.17■□□□□ 0.02
ACTB-213ENST00000493945 MAATS1Q7Z4T9 603 aa15.17■□□□□ 0.02
ACTB-213ENST00000493945 PLPP6Q8IY26 295 aa15.17■□□□□ 0.02
ACTB-213ENST00000493945 RYBPQ8N488 228 aaPredicted RBP15.17■□□□□ 0.02
ACTB-213ENST00000493945 FLCNQ8NFG4 579 aa15.17■□□□□ 0.02
ACTB-213ENST00000493945 PJA1Q8NG27 643 aa15.17■□□□□ 0.02
ACTB-213ENST00000493945 ATG4AQ8WYN0 398 aa15.17■□□□□ 0.02
ACTB-213ENST00000493945 OR8D1Q8WZ84 308 aa15.17■□□□□ 0.02
ACTB-213ENST00000493945 LRIG1Q96JA1 1093 aa15.17■□□□□ 0.02
ACTB-213ENST00000493945 RPL10LQ96L21 214 aaKnown RBP15.17■□□□□ 0.02
ACTB-213ENST00000493945 PSKH2Q96QS6 385 aa15.17■□□□□ 0.02
ACTB-213ENST00000493945 LMAN1LQ9HAT1 526 aa15.17■□□□□ 0.02
ACTB-213ENST00000493945 POLMQ9NP87 494 aaPredicted RBP15.17■□□□□ 0.02
ACTB-213ENST00000493945 CD320Q9NPF0 282 aa15.17■□□□□ 0.02
ACTB-213ENST00000493945 RBM22Q9NW64 420 aaKnown RBP eCLIP15.17■□□□□ 0.021e-10■■■□□ 18.6
ACTB-213ENST00000493945 DNPEPQ9ULA0 475 aa15.17■□□□□ 0.02
ACTB-213ENST00000493945 SIT1Q9Y3P8 196 aa15.17■□□□□ 0.02
ACTB-213ENST00000493945 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.16■□□□□ 0.02
ACTB-213ENST00000493945 A0A1W2PQ67 120 aa15.16■□□□□ 0.02
ACTB-213ENST00000493945 TCRBV7S2A1N4TA0A589 114 aa15.16■□□□□ 0.02
ACTB-213ENST00000493945 C1QTNF3-AMACRE9PGA6 284 aa15.16■□□□□ 0.02
ACTB-213ENST00000493945 KCNK1O00180 336 aa15.16■□□□□ 0.02
ACTB-213ENST00000493945 ALDH1A2O94788 518 aa15.16■□□□□ 0.02
ACTB-213ENST00000493945 KLF8O95600 359 aaPredicted RBP15.16■□□□□ 0.02
ACTB-213ENST00000493945 IFNB1P01574 187 aa15.16■□□□□ 0.02
ACTB-213ENST00000493945 GLDCP23378 1020 aa15.16■□□□□ 0.02
ACTB-213ENST00000493945 RBL1P28749 1068 aa15.16■□□□□ 0.02
ACTB-213ENST00000493945 KIR2DL1P43626 348 aaPredicted RBP15.16■□□□□ 0.02
ACTB-213ENST00000493945 TUBB4BP68371 445 aa15.16■□□□□ 0.02
ACTB-213ENST00000493945 NSUN2Q08J23 767 aaKnown RBP eCLIP15.16■□□□□ 0.02
ACTB-213ENST00000493945 SNX1Q13596 522 aa15.16■□□□□ 0.02
ACTB-213ENST00000493945 PPP1R7Q15435 360 aa15.16■□□□□ 0.02
ACTB-213ENST00000493945 OASLQ15646 514 aaKnown RBP15.16■□□□□ 0.02
ACTB-213ENST00000493945 TEX44Q53QW1 395 aa15.16■□□□□ 0.02
ACTB-213ENST00000493945 EGFLAMQ63HQ2 1017 aa15.16■□□□□ 0.02
ACTB-213ENST00000493945 TMEM215Q68D42 235 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms